RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
EXOSC1-204ENST00000370902 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
EXOSC1-204ENST00000370902 ABCC9O60706 1549 aa25.63■■□□□ 1.69
EXOSC1-204ENST00000370902 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
EXOSC1-204ENST00000370902 NACADO15069 1562 aa24.18■■□□□ 1.46
EXOSC1-204ENST00000370902 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
EXOSC1-204ENST00000370902 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
EXOSC1-204ENST00000370902 MYO15BQ96JP2 1530 aa23.86■■□□□ 1.41
EXOSC1-204ENST00000370902 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
EXOSC1-204ENST00000370902 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
EXOSC1-204ENST00000370902 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.38
EXOSC1-204ENST00000370902 ZCCHC6Q5VYS8 1495 aaKnown RBP23.6■■□□□ 1.37
EXOSC1-204ENST00000370902 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
EXOSC1-204ENST00000370902 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
EXOSC1-204ENST00000370902 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
EXOSC1-204ENST00000370902 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
EXOSC1-204ENST00000370902 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
EXOSC1-204ENST00000370902 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
EXOSC1-204ENST00000370902 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
EXOSC1-204ENST00000370902 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
EXOSC1-204ENST00000370902 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
EXOSC1-204ENST00000370902 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
EXOSC1-204ENST00000370902 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
EXOSC1-204ENST00000370902 CUX2O14529 1486 aa22.15■■□□□ 1.14
EXOSC1-204ENST00000370902 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
EXOSC1-204ENST00000370902 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
EXOSC1-204ENST00000370902 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
EXOSC1-204ENST00000370902 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
EXOSC1-204ENST00000370902 NESP48681 1621 aa22.05■■□□□ 1.12
EXOSC1-204ENST00000370902 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
EXOSC1-204ENST00000370902 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
EXOSC1-204ENST00000370902 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
EXOSC1-204ENST00000370902 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
EXOSC1-204ENST00000370902 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
EXOSC1-204ENST00000370902 WIZO95785 1651 aa21.68■■□□□ 1.06
EXOSC1-204ENST00000370902 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
EXOSC1-204ENST00000370902 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
EXOSC1-204ENST00000370902 WDR62O43379 1518 aa21.55■■□□□ 1.04
EXOSC1-204ENST00000370902 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
EXOSC1-204ENST00000370902 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
EXOSC1-204ENST00000370902 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
EXOSC1-204ENST00000370902 CFTRP13569 1480 aa21.38■■□□□ 1.01
EXOSC1-204ENST00000370902 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
EXOSC1-204ENST00000370902 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
EXOSC1-204ENST00000370902 PRDM2Q13029 1718 aa21.28■■□□□ 1
EXOSC1-204ENST00000370902 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
EXOSC1-204ENST00000370902 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
EXOSC1-204ENST00000370902 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
EXOSC1-204ENST00000370902 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
EXOSC1-204ENST00000370902 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
EXOSC1-204ENST00000370902 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
EXOSC1-204ENST00000370902 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
EXOSC1-204ENST00000370902 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
EXOSC1-204ENST00000370902 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
EXOSC1-204ENST00000370902 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
EXOSC1-204ENST00000370902 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
EXOSC1-204ENST00000370902 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
EXOSC1-204ENST00000370902 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
EXOSC1-204ENST00000370902 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
EXOSC1-204ENST00000370902 CHD1O14646 1710 aa20.82■□□□□ 0.92
EXOSC1-204ENST00000370902 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
EXOSC1-204ENST00000370902 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
EXOSC1-204ENST00000370902 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■□□ 15.2
EXOSC1-204ENST00000370902 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
EXOSC1-204ENST00000370902 ARAP1Q96P48 1450 aa20.63■□□□□ 0.89
EXOSC1-204ENST00000370902 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
EXOSC1-204ENST00000370902 CUX1P39880 1505 aa20.62■□□□□ 0.89
EXOSC1-204ENST00000370902 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
EXOSC1-204ENST00000370902 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
EXOSC1-204ENST00000370902 SOGA1O94964 1423 aa20.56■□□□□ 0.88
EXOSC1-204ENST00000370902 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
EXOSC1-204ENST00000370902 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
EXOSC1-204ENST00000370902 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
EXOSC1-204ENST00000370902 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
EXOSC1-204ENST00000370902 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
EXOSC1-204ENST00000370902 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
EXOSC1-204ENST00000370902 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
EXOSC1-204ENST00000370902 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
EXOSC1-204ENST00000370902 FBLN2P98095 1184 aa20.42■□□□□ 0.86
EXOSC1-204ENST00000370902 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
EXOSC1-204ENST00000370902 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
EXOSC1-204ENST00000370902 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
EXOSC1-204ENST00000370902 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
EXOSC1-204ENST00000370902 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
EXOSC1-204ENST00000370902 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
EXOSC1-204ENST00000370902 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
EXOSC1-204ENST00000370902 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
EXOSC1-204ENST00000370902 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
EXOSC1-204ENST00000370902 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
EXOSC1-204ENST00000370902 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
EXOSC1-204ENST00000370902 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
EXOSC1-204ENST00000370902 NUP160Q12769 1436 aa20.19■□□□□ 0.82
EXOSC1-204ENST00000370902 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
EXOSC1-204ENST00000370902 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
EXOSC1-204ENST00000370902 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
EXOSC1-204ENST00000370902 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
EXOSC1-204ENST00000370902 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
EXOSC1-204ENST00000370902 KIF13AQ9H1H9 1805 aa20■□□□□ 0.79
EXOSC1-204ENST00000370902 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
EXOSC1-204ENST00000370902 ADCY10Q96PN6 1610 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms