RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 POLR3GLQ9BT43 218 aa7.49□□□□□ -1.21
SMNDC1-202ENST00000369603 TOP2BQ02880 1626 aa7.48□□□□□ -1.21
SMNDC1-202ENST00000369603 CC2D2AQ9P2K1 1620 aa7.48□□□□□ -1.21
SMNDC1-202ENST00000369603 IGF1RP08069 1367 aa7.47□□□□□ -1.21
SMNDC1-202ENST00000369603 PLEKHD1A6NEE1 506 aa7.47□□□□□ -1.21
SMNDC1-202ENST00000369603 ERICH3Q5RHP9 1530 aa7.47□□□□□ -1.21
SMNDC1-202ENST00000369603 ANP32CO43423 234 aa7.46□□□□□ -1.21
SMNDC1-202ENST00000369603 TSPY4P0CV99 314 aa7.46□□□□□ -1.22
SMNDC1-202ENST00000369603 TSPY10P0CW01 314 aa7.46□□□□□ -1.22
SMNDC1-202ENST00000369603 CHIC2Q9UKJ5 165 aa7.45□□□□□ -1.22
SMNDC1-202ENST00000369603 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMNDC1-202ENST00000369603 ARHGAP35Q9NRY4 1499 aa7.44□□□□□ -1.22
SMNDC1-202ENST00000369603 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
SMNDC1-202ENST00000369603 CUX1P39880 1505 aa7.43□□□□□ -1.22
SMNDC1-202ENST00000369603 CARMIL2Q6F5E8 1435 aa7.43□□□□□ -1.22
SMNDC1-202ENST00000369603 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-202ENST00000369603 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
SMNDC1-202ENST00000369603 GAPVD1Q14C86 1478 aa7.42□□□□□ -1.22
SMNDC1-202ENST00000369603 CFDP1Q9UEE9 299 aaPredicted RBP7.42□□□□□ -1.22
SMNDC1-202ENST00000369603 PRXQ9BXM0 1461 aa7.42□□□□□ -1.22
SMNDC1-202ENST00000369603 RAD54L2Q9Y4B4 1467 aa7.41□□□□□ -1.22
SMNDC1-202ENST00000369603 RRP7BPQ9NSQ0 103 aa7.41□□□□□ -1.22
SMNDC1-202ENST00000369603 FHOD3Q2V2M9 1422 aa7.4□□□□□ -1.22
SMNDC1-202ENST00000369603 TIMELESSQ9UNS1 1208 aa7.4□□□□□ -1.22
SMNDC1-202ENST00000369603 SETD5Q9C0A6 1442 aa7.4□□□□□ -1.23
SMNDC1-202ENST00000369603 TOPBP1Q92547 1522 aa7.39□□□□□ -1.23
SMNDC1-202ENST00000369603 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
SMNDC1-202ENST00000369603 LAMC3Q9Y6N6 1575 aa7.38□□□□□ -1.23
SMNDC1-202ENST00000369603 SLC4A1APQ9BWU0 796 aaKnown RBP7.38□□□□□ -1.23
SMNDC1-202ENST00000369603 NESP48681 1621 aa7.37□□□□□ -1.23
SMNDC1-202ENST00000369603 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-202ENST00000369603 BIVM-ERCC5R4GMW8 1640 aa7.36□□□□□ -1.23
SMNDC1-202ENST00000369603 CNGB1Q14028 1251 aaPredicted RBP7.36□□□□□ -1.23
SMNDC1-202ENST00000369603 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
SMNDC1-202ENST00000369603 CCDC18Q5T9S5 1454 aa7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 DDX10Q13206 875 aaKnown RBP7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 ABCA10Q8WWZ4 1543 aa7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 RAB3GAP2Q9H2M9 1393 aa7.34□□□□□ -1.23
SMNDC1-202ENST00000369603 EFCAB5A4FU69 1503 aa7.33□□□□□ -1.24
SMNDC1-202ENST00000369603 EIF4G2P78344 907 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMNDC1-202ENST00000369603 JPH4Q96JJ6 628 aa7.33□□□□□ -1.24
SMNDC1-202ENST00000369603 ARAP1Q96P48 1450 aa7.33□□□□□ -1.24
SMNDC1-202ENST00000369603 IFT140Q96RY7 1462 aa7.32□□□□□ -1.24
SMNDC1-202ENST00000369603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.242e-7■■■□□ 14.7
SMNDC1-202ENST00000369603 CASKIN1Q8WXD9 1431 aa7.32□□□□□ -1.24
SMNDC1-202ENST00000369603 AQRO60306 1485 aaKnown RBP eCLIP7.31□□□□□ -1.242e-6■■■■■ 28.3
SMNDC1-202ENST00000369603 MIER1Q8N108 512 aa7.31□□□□□ -1.24
SMNDC1-202ENST00000369603 FYCO1Q9BQS8 1478 aa7.31□□□□□ -1.24
SMNDC1-202ENST00000369603 SIN3AQ96ST3 1273 aa7.3□□□□□ -1.24
SMNDC1-202ENST00000369603 LRRC9Q6ZRR7 1453 aa7.3□□□□□ -1.24
SMNDC1-202ENST00000369603 BCANQ96GW7 911 aa7.3□□□□□ -1.24
SMNDC1-202ENST00000369603 CUL7Q14999 1698 aa7.29□□□□□ -1.24
SMNDC1-202ENST00000369603 DHX57Q6P158 1386 aaKnown RBP7.28□□□□□ -1.24
SMNDC1-202ENST00000369603 RSPH4AQ5TD94 716 aa7.28□□□□□ -1.24
SMNDC1-202ENST00000369603 ANKRD30AQ9BXX3 1397 aa7.27□□□□□ -1.24
SMNDC1-202ENST00000369603 RRBP1Q9P2E9 1410 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-202ENST00000369603 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
SMNDC1-202ENST00000369603 FGD6Q6ZV73 1430 aa7.26□□□□□ -1.25
SMNDC1-202ENST00000369603 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-202ENST00000369603 PTPRGP23470 1445 aa7.26□□□□□ -1.25
SMNDC1-202ENST00000369603 MYOM3Q5VTT5 1437 aa7.26□□□□□ -1.25
SMNDC1-202ENST00000369603 CHGAP10645 457 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 PHLDB1Q86UU1 1377 aa7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 URB2Q14146 1524 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 EFCAB2Q5VUJ9 269 aa7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 MPHOSPH9Q99550 1183 aa7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
SMNDC1-202ENST00000369603 MAP3K1Q13233 1512 aa7.24□□□□□ -1.25
SMNDC1-202ENST00000369603 HIRIP3Q9BW71 556 aaPredicted RBP7.24□□□□□ -1.25
SMNDC1-202ENST00000369603 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
SMNDC1-202ENST00000369603 NCOA2Q15596 1464 aa7.23□□□□□ -1.25
SMNDC1-202ENST00000369603 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
SMNDC1-202ENST00000369603 STAG3Q9UJ98 1225 aa7.22□□□□□ -1.25
SMNDC1-202ENST00000369603 KANK1Q14678 1352 aa7.22□□□□□ -1.25
SMNDC1-202ENST00000369603 EHBP1L1Q8N3D4 1523 aa7.22□□□□□ -1.25
SMNDC1-202ENST00000369603 KIAA0586Q9BVV6 1533 aa7.22□□□□□ -1.25
SMNDC1-202ENST00000369603 SNAPC4Q5SXM2 1469 aa7.21□□□□□ -1.25
SMNDC1-202ENST00000369603 PKD2Q13563 968 aa7.21□□□□□ -1.25
SMNDC1-202ENST00000369603 CARD11Q9BXL7 1154 aa7.21□□□□□ -1.25
SMNDC1-202ENST00000369603 MRS2Q9HD23 443 aa7.21□□□□□ -1.25
SMNDC1-202ENST00000369603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 TMC1Q8TDI8 760 aa7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 RGL3Q3MIN7 710 aa7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 PRDM2Q13029 1718 aa7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 NUP155O75694 1391 aa7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 HECW1Q76N89 1606 aa7.21□□□□□ -1.26
SMNDC1-202ENST00000369603 CDCA8Q53HL2 280 aa7.2□□□□□ -1.26
SMNDC1-202ENST00000369603 IQGAP2Q13576 1575 aa7.2□□□□□ -1.26
SMNDC1-202ENST00000369603 FAM9BQ8IZU0 186 aa7.2□□□□□ -1.26
SMNDC1-202ENST00000369603 DNAJC5BQ9UF47 199 aa7.2□□□□□ -1.26
SMNDC1-202ENST00000369603 MIA2Q96PC5 1412 aa7.19□□□□□ -1.26
SMNDC1-202ENST00000369603 SLC24A1O60721 1099 aa7.19□□□□□ -1.26
SMNDC1-202ENST00000369603 MAGI1Q96QZ7 1491 aaPredicted RBP7.19□□□□□ -1.26
SMNDC1-202ENST00000369603 UACAQ9BZF9 1416 aa7.19□□□□□ -1.26
SMNDC1-202ENST00000369603 HNRNPMP52272 730 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMNDC1-202ENST00000369603 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
SMNDC1-202ENST00000369603 PCF11O94913 1555 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-202ENST00000369603 SYNJ2O15056 1496 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms