RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
PRKN-205ENST00000366897 BCANQ96GW7 911 aa19.66■□□□□ 0.74
PRKN-205ENST00000366897 CUX1P39880 1505 aa19.65■□□□□ 0.74
PRKN-205ENST00000366897 CLSPNQ9HAW4 1339 aa19.65■□□□□ 0.74
PRKN-205ENST00000366897 TSHZ2Q9NRE2 1034 aa19.63■□□□□ 0.73
PRKN-205ENST00000366897 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
PRKN-205ENST00000366897 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
PRKN-205ENST00000366897 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
PRKN-205ENST00000366897 AQRO60306 1485 aaKnown RBP eCLIP19.56■□□□□ 0.72
PRKN-205ENST00000366897 TOP2BQ02880 1626 aa19.55■□□□□ 0.72
PRKN-205ENST00000366897 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
PRKN-205ENST00000366897 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
PRKN-205ENST00000366897 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
PRKN-205ENST00000366897 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
PRKN-205ENST00000366897 RRBP1Q9P2E9 1410 aaKnown RBP19.52■□□□□ 0.72
PRKN-205ENST00000366897 DDX10Q13206 875 aaKnown RBP19.51■□□□□ 0.71
PRKN-205ENST00000366897 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
PRKN-205ENST00000366897 SIN3AQ96ST3 1273 aa19.49■□□□□ 0.71
PRKN-205ENST00000366897 RAB3GAP2Q9H2M9 1393 aa19.48■□□□□ 0.71
PRKN-205ENST00000366897 FKBP8Q14318 412 aa19.46■□□□□ 0.71
PRKN-205ENST00000366897 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
PRKN-205ENST00000366897 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
PRKN-205ENST00000366897 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
PRKN-205ENST00000366897 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
PRKN-205ENST00000366897 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
PRKN-205ENST00000366897 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
PRKN-205ENST00000366897 ANP32EQ9BTT0 268 aa19.39■□□□□ 0.7
PRKN-205ENST00000366897 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.7
PRKN-205ENST00000366897 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
PRKN-205ENST00000366897 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
PRKN-205ENST00000366897 MAPKBP1O60336 1514 aa19.39■□□□□ 0.69
PRKN-205ENST00000366897 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
PRKN-205ENST00000366897 FBLN2P98095 1184 aa19.38■□□□□ 0.69
PRKN-205ENST00000366897 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
PRKN-205ENST00000366897 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
PRKN-205ENST00000366897 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
PRKN-205ENST00000366897 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
PRKN-205ENST00000366897 PHLDB1Q86UU1 1377 aa19.3■□□□□ 0.68
PRKN-205ENST00000366897 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
PRKN-205ENST00000366897 SETD5Q9C0A6 1442 aa19.3■□□□□ 0.68
PRKN-205ENST00000366897 CHD1O14646 1710 aa19.28■□□□□ 0.68
PRKN-205ENST00000366897 CHMP7Q8WUX9 453 aaPredicted RBP19.28■□□□□ 0.68
PRKN-205ENST00000366897 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
PRKN-205ENST00000366897 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
PRKN-205ENST00000366897 PBRM1Q86U86 1689 aa19.26■□□□□ 0.67
PRKN-205ENST00000366897 NEFLP07196 543 aa19.24■□□□□ 0.67
PRKN-205ENST00000366897 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
PRKN-205ENST00000366897 IGF1RP08069 1367 aa19.22■□□□□ 0.67
PRKN-205ENST00000366897 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
PRKN-205ENST00000366897 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
PRKN-205ENST00000366897 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
PRKN-205ENST00000366897 ANP32CO43423 234 aa19.19■□□□□ 0.66
PRKN-205ENST00000366897 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
PRKN-205ENST00000366897 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
PRKN-205ENST00000366897 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
PRKN-205ENST00000366897 ADAMTS12P58397 1594 aa19.11■□□□□ 0.65
PRKN-205ENST00000366897 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
PRKN-205ENST00000366897 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
PRKN-205ENST00000366897 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PRKN-205ENST00000366897 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PRKN-205ENST00000366897 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PRKN-205ENST00000366897 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
PRKN-205ENST00000366897 FHOD3Q2V2M9 1422 aa19.09■□□□□ 0.65
PRKN-205ENST00000366897 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
PRKN-205ENST00000366897 CLASP1Q7Z460 1538 aa19.08■□□□□ 0.64
PRKN-205ENST00000366897 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
PRKN-205ENST00000366897 PCF11O94913 1555 aaKnown RBP19.05■□□□□ 0.64
PRKN-205ENST00000366897 HNRNPUQ00839 825 aaKnown RBP eCLIP19.04■□□□□ 0.64
PRKN-205ENST00000366897 MSH5O43196 834 aa19.03■□□□□ 0.64
PRKN-205ENST00000366897 MAP3K1Q13233 1512 aa19.02■□□□□ 0.64
PRKN-205ENST00000366897 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
PRKN-205ENST00000366897 NUP160Q12769 1436 aa19.01■□□□□ 0.63
PRKN-205ENST00000366897 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
PRKN-205ENST00000366897 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
PRKN-205ENST00000366897 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
PRKN-205ENST00000366897 CUL7Q14999 1698 aa18.93■□□□□ 0.62
PRKN-205ENST00000366897 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
PRKN-205ENST00000366897 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
PRKN-205ENST00000366897 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
PRKN-205ENST00000366897 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
PRKN-205ENST00000366897 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
PRKN-205ENST00000366897 RRP7BPQ9NSQ0 103 aa18.89■□□□□ 0.61
PRKN-205ENST00000366897 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
PRKN-205ENST00000366897 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
PRKN-205ENST00000366897 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
PRKN-205ENST00000366897 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
PRKN-205ENST00000366897 HSPA5P11021 654 aaKnown RBP18.87■□□□□ 0.61
PRKN-205ENST00000366897 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
PRKN-205ENST00000366897 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
PRKN-205ENST00000366897 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
PRKN-205ENST00000366897 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
PRKN-205ENST00000366897 UACAQ9BZF9 1416 aa18.84■□□□□ 0.61
PRKN-205ENST00000366897 CNGB1Q14028 1251 aaPredicted RBP18.83■□□□□ 0.61
PRKN-205ENST00000366897 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.6
PRKN-205ENST00000366897 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
PRKN-205ENST00000366897 KIAA0586Q9BVV6 1533 aa18.82■□□□□ 0.6
PRKN-205ENST00000366897 FOXD1Q16676 465 aa18.82■□□□□ 0.6
PRKN-205ENST00000366897 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
PRKN-205ENST00000366897 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
PRKN-205ENST00000366897 NAIPQ13075 1403 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms