RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.32□□□□□ -0.121e-7■■■■■ 323.4
PRKN-205ENST00000366897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.051e-8■■■■■ 226.9
PRKN-205ENST00000366897 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.55■□□□□ 0.086e-17■■■■■ 149.9
PRKN-205ENST00000366897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.78□□□□□ -0.23e-11■■■■■ 81.1
PRKN-205ENST00000366897 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.49□□□□□ -0.253e-8■■■■■ 70.6
PRKN-205ENST00000366897 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.433e-8■■■■■ 70.1
PRKN-205ENST00000366897 SMNDC1O75940 238 aaKnown RBP eCLIP14.47□□□□□ -0.091e-18■■■■■ 66.9
PRKN-205ENST00000366897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.122e-15■■■■■ 44.8
PRKN-205ENST00000366897 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.24e-9■■■■■ 41.8
PRKN-205ENST00000366897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■■■ 41.5
PRKN-205ENST00000366897 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■■■■ 40.4
PRKN-205ENST00000366897 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.59e-8■■■■■ 35.6
PRKN-205ENST00000366897 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■■■ 33.3
PRKN-205ENST00000366897 TROVE2P10155 538 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■■ 29.4
PRKN-205ENST00000366897 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.596e-6■■■■□ 25.1
PRKN-205ENST00000366897 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■■□ 23.9
PRKN-205ENST00000366897 DDX3XO00571 662 aaKnown RBP eCLIP14.79□□□□□ -0.044e-14■■■■□ 23.3
PRKN-205ENST00000366897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.014e-10■■■■□ 21.6
PRKN-205ENST00000366897 DDX21Q9NR30 783 aaKnown RBP eCLIP15.87■□□□□ 0.138e-6■■□□□ 14
Retrieved 19 of 19 RNA–protein pairs in 2.7 ms