RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
APH1A-202ENST00000360244 TRIM52Q96A61 297 aa25.2■■□□□ 1.63
APH1A-202ENST00000360244 SIN3AQ96ST3 1273 aa25.19■■□□□ 1.62
APH1A-202ENST00000360244 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
APH1A-202ENST00000360244 MAP3K1Q13233 1512 aa25.16■■□□□ 1.62
APH1A-202ENST00000360244 ANP32CO43423 234 aa25.16■■□□□ 1.62
APH1A-202ENST00000360244 TIMELESSQ9UNS1 1208 aa25.16■■□□□ 1.62
APH1A-202ENST00000360244 MSH5O43196 834 aa25.15■■□□□ 1.62
APH1A-202ENST00000360244 CUX1P39880 1505 aa25.14■■□□□ 1.61
APH1A-202ENST00000360244 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
APH1A-202ENST00000360244 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
APH1A-202ENST00000360244 PHLDB1Q86UU1 1377 aa25.06■■□□□ 1.6
APH1A-202ENST00000360244 FANCIQ9NVI1 1328 aa25.05■■□□□ 1.6
APH1A-202ENST00000360244 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
APH1A-202ENST00000360244 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
APH1A-202ENST00000360244 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
APH1A-202ENST00000360244 ERICH6Q7L0X2 663 aa24.89■■□□□ 1.58
APH1A-202ENST00000360244 IGF1RP08069 1367 aa24.87■■□□□ 1.57
APH1A-202ENST00000360244 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
APH1A-202ENST00000360244 TONSLQ96HA7 1378 aa24.86■■□□□ 1.57
APH1A-202ENST00000360244 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
APH1A-202ENST00000360244 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
APH1A-202ENST00000360244 PCF11O94913 1555 aaKnown RBP24.83■■□□□ 1.57
APH1A-202ENST00000360244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.565e-6■■■■■ 46.2
APH1A-202ENST00000360244 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
APH1A-202ENST00000360244 CFTRP13569 1480 aa24.81■■□□□ 1.56
APH1A-202ENST00000360244 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
APH1A-202ENST00000360244 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
APH1A-202ENST00000360244 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
APH1A-202ENST00000360244 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
APH1A-202ENST00000360244 CCDC18Q5T9S5 1454 aa24.73■■□□□ 1.55
APH1A-202ENST00000360244 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
APH1A-202ENST00000360244 UACAQ9BZF9 1416 aa24.7■■□□□ 1.55
APH1A-202ENST00000360244 ATP1B4Q9UN42 357 aaPredicted RBP24.69■■□□□ 1.54
APH1A-202ENST00000360244 FYCO1Q9BQS8 1478 aa24.69■■□□□ 1.54
APH1A-202ENST00000360244 KDM5BQ9UGL1 1544 aa24.67■■□□□ 1.54
APH1A-202ENST00000360244 P3H3Q8IVL6 736 aa24.67■■□□□ 1.54
APH1A-202ENST00000360244 HFM1A2PYH4 1435 aa24.66■■□□□ 1.54
APH1A-202ENST00000360244 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
APH1A-202ENST00000360244 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
APH1A-202ENST00000360244 PTPN23Q9H3S7 1636 aa24.63■■□□□ 1.53
APH1A-202ENST00000360244 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
APH1A-202ENST00000360244 WASHC2AQ641Q2 1341 aa24.63■■□□□ 1.53
APH1A-202ENST00000360244 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
APH1A-202ENST00000360244 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
APH1A-202ENST00000360244 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
APH1A-202ENST00000360244 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.53
APH1A-202ENST00000360244 PTPRKQ15262 1439 aa24.59■■□□□ 1.53
APH1A-202ENST00000360244 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
APH1A-202ENST00000360244 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
APH1A-202ENST00000360244 HSPA5P11021 654 aaKnown RBP24.56■■□□□ 1.52
APH1A-202ENST00000360244 B4GALNT3Q6L9W6 998 aa24.55■■□□□ 1.52
APH1A-202ENST00000360244 NAIPQ13075 1403 aa24.55■■□□□ 1.52
APH1A-202ENST00000360244 CCDC184Q52MB2 194 aa24.54■■□□□ 1.52
APH1A-202ENST00000360244 CNTLNQ9NXG0 1405 aa24.53■■□□□ 1.52
APH1A-202ENST00000360244 NOP58Q9Y2X3 529 aaKnown RBP24.5■■□□□ 1.51
APH1A-202ENST00000360244 ZBED9Q6R2W3 1325 aa24.49■■□□□ 1.51
APH1A-202ENST00000360244 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
APH1A-202ENST00000360244 EIF4G2P78344 907 aaKnown RBP eCLIP24.46■■□□□ 1.51
APH1A-202ENST00000360244 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.5
APH1A-202ENST00000360244 PRKRIP1Q9H875 184 aaPredicted RBP24.45■■□□□ 1.5
APH1A-202ENST00000360244 MTUS2Q5JR59 1369 aa24.45■■□□□ 1.5
APH1A-202ENST00000360244 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
APH1A-202ENST00000360244 MRS2Q9HD23 443 aa24.42■■□□□ 1.5
APH1A-202ENST00000360244 MYOM3Q5VTT5 1437 aa24.41■■□□□ 1.5
APH1A-202ENST00000360244 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
APH1A-202ENST00000360244 NBR1Q14596 966 aa24.39■■□□□ 1.49
APH1A-202ENST00000360244 NCOA1Q15788 1441 aa24.39■■□□□ 1.49
APH1A-202ENST00000360244 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
APH1A-202ENST00000360244 CCDC7Q96M83 1385 aa24.38■■□□□ 1.49
APH1A-202ENST00000360244 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
APH1A-202ENST00000360244 HECW1Q76N89 1606 aa24.37■■□□□ 1.49
APH1A-202ENST00000360244 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
APH1A-202ENST00000360244 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
APH1A-202ENST00000360244 LRRIQ1Q96JM4 1722 aa24.34■■□□□ 1.49
APH1A-202ENST00000360244 SUPT6HQ7KZ85 1726 aaKnown RBP24.32■■□□□ 1.48
APH1A-202ENST00000360244 GCC2Q8IWJ2 1684 aa24.31■■□□□ 1.48
APH1A-202ENST00000360244 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
APH1A-202ENST00000360244 CUL7Q14999 1698 aa24.29■■□□□ 1.48
APH1A-202ENST00000360244 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
APH1A-202ENST00000360244 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
APH1A-202ENST00000360244 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
APH1A-202ENST00000360244 L3MBTL2Q969R5 705 aa24.27■■□□□ 1.48
APH1A-202ENST00000360244 IPO9Q96P70 1041 aaKnown RBP24.27■■□□□ 1.48
APH1A-202ENST00000360244 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
APH1A-202ENST00000360244 ANP32AP39687 249 aaKnown RBP24.26■■□□□ 1.47
APH1A-202ENST00000360244 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
APH1A-202ENST00000360244 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
APH1A-202ENST00000360244 UGGT2Q9NYU1 1516 aa24.24■■□□□ 1.47
APH1A-202ENST00000360244 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
APH1A-202ENST00000360244 THOC2Q8NI27 1593 aaKnown RBP24.23■■□□□ 1.47
APH1A-202ENST00000360244 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
APH1A-202ENST00000360244 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
APH1A-202ENST00000360244 RNF123Q5XPI4 1314 aa24.22■■□□□ 1.47
APH1A-202ENST00000360244 PRKCSHP14314 528 aaPredicted RBP24.22■■□□□ 1.47
APH1A-202ENST00000360244 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
APH1A-202ENST00000360244 KDM6BO15054 1643 aa24.22■■□□□ 1.47
APH1A-202ENST00000360244 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
APH1A-202ENST00000360244 CCDC136Q96JN2 1154 aa24.21■■□□□ 1.47
APH1A-202ENST00000360244 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms