RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 GRIN2BQ13224 1484 aa34.4■■■■□ 3.1
POLR2J2-202ENST00000358438 CTTNBP2Q8WZ74 1663 aa34.39■■■■□ 3.1
POLR2J2-202ENST00000358438 EIF4G3O43432 1585 aaKnown RBP34.34■■■■□ 3.09
POLR2J2-202ENST00000358438 ADAMTS12P58397 1594 aa34.33■■■■□ 3.09
POLR2J2-202ENST00000358438 FHAD1B1AJZ9 1412 aa34.32■■■■□ 3.09
POLR2J2-202ENST00000358438 MYT1Q01538 1121 aa34.31■■■■□ 3.08
POLR2J2-202ENST00000358438 SCAF1Q9H7N4 1312 aaKnown RBP34.28■■■■□ 3.08
POLR2J2-202ENST00000358438 EFCAB5A4FU69 1503 aa34.17■■■■□ 3.06
POLR2J2-202ENST00000358438 APLP2Q06481 763 aa34.16■■■■□ 3.06
POLR2J2-202ENST00000358438 SNAPC4Q5SXM2 1469 aa34.16■■■■□ 3.06
POLR2J2-202ENST00000358438 TTBK1Q5TCY1 1321 aaPredicted RBP34.15■■■■□ 3.06
POLR2J2-202ENST00000358438 MAGI1Q96QZ7 1491 aaPredicted RBP34.09■■■■□ 3.05
POLR2J2-202ENST00000358438 SAMD9Q5K651 1589 aa34.02■■■■□ 3.04
POLR2J2-202ENST00000358438 P3H3Q8IVL6 736 aa34.02■■■■□ 3.04
POLR2J2-202ENST00000358438 FHOD3Q2V2M9 1422 aa34.01■■■■□ 3.04
POLR2J2-202ENST00000358438 GRIN2AQ12879 1464 aa34■■■■□ 3.03
POLR2J2-202ENST00000358438 IQGAP2Q13576 1575 aa34■■■■□ 3.03
POLR2J2-202ENST00000358438 SYNJ2O15056 1496 aa33.97■■■■□ 3.03
POLR2J2-202ENST00000358438 PCF11O94913 1555 aaKnown RBP33.91■■■■□ 3.02
POLR2J2-202ENST00000358438 KIAA0586Q9BVV6 1533 aa33.87■■■■□ 3.01
POLR2J2-202ENST00000358438 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
POLR2J2-202ENST00000358438 FMN1Q68DA7 1419 aa33.87■■■■□ 3.01
POLR2J2-202ENST00000358438 MAP3K1Q13233 1512 aa33.86■■■■□ 3.01
POLR2J2-202ENST00000358438 KANK4Q5T7N3 995 aaPredicted RBP33.84■■■■□ 3.01
POLR2J2-202ENST00000358438 TIAM1Q13009 1591 aa33.83■■■■□ 3.01
POLR2J2-202ENST00000358438 FYCO1Q9BQS8 1478 aa33.83■■■■□ 3.01
POLR2J2-202ENST00000358438 CASKIN1Q8WXD9 1431 aa33.82■■■■□ 3
POLR2J2-202ENST00000358438 UGGT2Q9NYU1 1516 aa33.81■■■■□ 3
POLR2J2-202ENST00000358438 FBLN2P98095 1184 aa33.8■■■■□ 3
POLR2J2-202ENST00000358438 CEP170Q5SW79 1584 aa33.79■■■■□ 3
POLR2J2-202ENST00000358438 CFAP43Q8NDM7 1665 aa33.76■■■□□ 2.99
POLR2J2-202ENST00000358438 NUP160Q12769 1436 aa33.73■■■□□ 2.99
POLR2J2-202ENST00000358438 ACIN1Q9UKV3 1341 aaKnown RBP33.68■■■□□ 2.98
POLR2J2-202ENST00000358438 ATP1B4Q9UN42 357 aaPredicted RBP33.68■■■□□ 2.98
POLR2J2-202ENST00000358438 LRRC9Q6ZRR7 1453 aa33.67■■■□□ 2.98
POLR2J2-202ENST00000358438 KIAA0556O60303 1618 aa33.65■■■□□ 2.98
POLR2J2-202ENST00000358438 DISP1Q96F81 1524 aa33.64■■■□□ 2.98
POLR2J2-202ENST00000358438 LRRIQ1Q96JM4 1722 aa33.58■■■□□ 2.97
POLR2J2-202ENST00000358438 CHD1O14646 1710 aa33.58■■■□□ 2.97
POLR2J2-202ENST00000358438 RRBP1Q9P2E9 1410 aaKnown RBP33.51■■■□□ 2.95
POLR2J2-202ENST00000358438 HECW1Q76N89 1606 aa33.51■■■□□ 2.95
POLR2J2-202ENST00000358438 JPH4Q96JJ6 628 aa33.48■■■□□ 2.95
POLR2J2-202ENST00000358438 CCDC18Q5T9S5 1454 aa33.45■■■□□ 2.94
POLR2J2-202ENST00000358438 CARMIL2Q6F5E8 1435 aa33.43■■■□□ 2.94
POLR2J2-202ENST00000358438 HNRNPUL2Q1KMD3 747 aaKnown RBP33.41■■■□□ 2.94
POLR2J2-202ENST00000358438 CENPBP07199 599 aaPredicted RBP33.39■■■□□ 2.94
POLR2J2-202ENST00000358438 CCNB3Q8WWL7 1395 aa33.39■■■□□ 2.94
POLR2J2-202ENST00000358438 PHLDB1Q86UU1 1377 aa33.38■■■□□ 2.93
POLR2J2-202ENST00000358438 EPRSP07814 1512 aaKnown RBP33.37■■■□□ 2.93
POLR2J2-202ENST00000358438 MTUS2Q5JR59 1369 aa33.37■■■□□ 2.93
POLR2J2-202ENST00000358438 NEUROD1Q13562 356 aa33.37■■■□□ 2.93
POLR2J2-202ENST00000358438 RAPGEF6Q8TEU7 1601 aa33.34■■■□□ 2.93
POLR2J2-202ENST00000358438 OSCARQ8IYS5 282 aa33.33■■■□□ 2.93
POLR2J2-202ENST00000358438 EHBP1L1Q8N3D4 1523 aa33.32■■■□□ 2.92
POLR2J2-202ENST00000358438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.32■■■□□ 2.92
POLR2J2-202ENST00000358438 CDK13Q14004 1512 aaKnown RBP33.29■■■□□ 2.92
POLR2J2-202ENST00000358438 MAGI3Q5TCQ9 1506 aa33.27■■■□□ 2.92
POLR2J2-202ENST00000358438 NUP153P49790 1475 aaKnown RBP33.27■■■□□ 2.92
POLR2J2-202ENST00000358438 SHROOM2Q13796 1616 aa33.26■■■□□ 2.91
POLR2J2-202ENST00000358438 PRG4Q92954 1404 aaPredicted RBP33.26■■■□□ 2.91
POLR2J2-202ENST00000358438 SUPT6HQ7KZ85 1726 aaKnown RBP33.25■■■□□ 2.91
POLR2J2-202ENST00000358438 PLB1Q6P1J6 1458 aa33.22■■■□□ 2.91
POLR2J2-202ENST00000358438 CCER1Q8TC90 406 aaPredicted RBP33.22■■■□□ 2.91
POLR2J2-202ENST00000358438 NCOA2Q15596 1464 aa33.21■■■□□ 2.91
POLR2J2-202ENST00000358438 GTF3C3Q9Y5Q9 886 aa33.19■■■□□ 2.9
POLR2J2-202ENST00000358438 ARID3CA6NKF2 412 aa33.17■■■□□ 2.9
POLR2J2-202ENST00000358438 ARHGEF11O15085 1522 aa33.15■■■□□ 2.9
POLR2J2-202ENST00000358438 CLASP1Q7Z460 1538 aa33.15■■■□□ 2.9
POLR2J2-202ENST00000358438 ABCA8O94911 1581 aa33.13■■■□□ 2.89
POLR2J2-202ENST00000358438 FGD6Q6ZV73 1430 aa33.12■■■□□ 2.89
POLR2J2-202ENST00000358438 MYOM3Q5VTT5 1437 aa33.1■■■□□ 2.89
POLR2J2-202ENST00000358438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.09■■■□□ 2.89
POLR2J2-202ENST00000358438 FAM50AQ14320 339 aaKnown RBP33.08■■■□□ 2.89
POLR2J2-202ENST00000358438 PTPRGP23470 1445 aa33.07■■■□□ 2.89
POLR2J2-202ENST00000358438 DIEXFQ68CQ4 756 aaKnown RBP33.07■■■□□ 2.88
POLR2J2-202ENST00000358438 ITGAEP38570 1179 aa33.06■■■□□ 2.88
POLR2J2-202ENST00000358438 CDK11AQ9UQ88 783 aaPredicted RBP33.03■■■□□ 2.88
POLR2J2-202ENST00000358438 ERCC6L2Q5T890 1561 aa33.01■■■□□ 2.88
POLR2J2-202ENST00000358438 TROQ12816 1431 aaPredicted RBP32.95■■■□□ 2.87
POLR2J2-202ENST00000358438 PTPN23Q9H3S7 1636 aa32.94■■■□□ 2.86
POLR2J2-202ENST00000358438 ATP10BO94823 1461 aa32.93■■■□□ 2.86
POLR2J2-202ENST00000358438 UACAQ9BZF9 1416 aa32.89■■■□□ 2.86
POLR2J2-202ENST00000358438 MIA2Q96PC5 1412 aa32.88■■■□□ 2.85
POLR2J2-202ENST00000358438 ADCY10Q96PN6 1610 aa32.88■■■□□ 2.85
POLR2J2-202ENST00000358438 TCOF1Q13428 1488 aaKnown RBP32.87■■■□□ 2.85
POLR2J2-202ENST00000358438 KIF14Q15058 1648 aa32.82■■■□□ 2.84
POLR2J2-202ENST00000358438 SETD5Q9C0A6 1442 aa32.81■■■□□ 2.84
POLR2J2-202ENST00000358438 PLEKHD1A6NEE1 506 aa32.8■■■□□ 2.84
POLR2J2-202ENST00000358438 ABCC2Q92887 1545 aa32.8■■■□□ 2.84
POLR2J2-202ENST00000358438 RAB3GAP2Q9H2M9 1393 aa32.8■■■□□ 2.84
POLR2J2-202ENST00000358438 DHX57Q6P158 1386 aaKnown RBP32.76■■■□□ 2.84
POLR2J2-202ENST00000358438 PTPRKQ15262 1439 aa32.76■■■□□ 2.83
POLR2J2-202ENST00000358438 ITSN2Q9NZM3 1697 aa32.75■■■□□ 2.83
POLR2J2-202ENST00000358438 GPATCH8Q9UKJ3 1502 aaKnown RBP32.69■■■□□ 2.82
POLR2J2-202ENST00000358438 RIMBP3CA6NJZ7 1639 aa32.68■■■□□ 2.82
POLR2J2-202ENST00000358438 RIMBP3BA6NNM3 1639 aa32.68■■■□□ 2.82
POLR2J2-202ENST00000358438 RIMBP3Q9UFD9 1639 aa32.68■■■□□ 2.82
POLR2J2-202ENST00000358438 UHRF1BP1LA0JNW5 1464 aa32.68■■■□□ 2.82
POLR2J2-202ENST00000358438 CLSPNQ9HAW4 1339 aa32.66■■■□□ 2.82
POLR2J2-202ENST00000358438 ABCC10Q5T3U5 1492 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms