RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 VPS8Q8N3P4 1428 aa26.23■■□□□ 1.79
C19orf47-201ENST00000357884 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
C19orf47-201ENST00000357884 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
C19orf47-201ENST00000357884 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
C19orf47-201ENST00000357884 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
C19orf47-201ENST00000357884 ARAP1Q96P48 1450 aa26.14■■□□□ 1.78
C19orf47-201ENST00000357884 ARHGAP35Q9NRY4 1499 aa26.13■■□□□ 1.77
C19orf47-201ENST00000357884 RANGAP1P46060 587 aaPredicted RBP26.11■■□□□ 1.77
C19orf47-201ENST00000357884 CTTNBP2Q8WZ74 1663 aa26.11■■□□□ 1.77
C19orf47-201ENST00000357884 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
C19orf47-201ENST00000357884 EFCAB5A4FU69 1503 aa26.06■■□□□ 1.76
C19orf47-201ENST00000357884 CHD1O14646 1710 aa26.06■■□□□ 1.76
C19orf47-201ENST00000357884 APLP2Q06481 763 aa25.97■■□□□ 1.75
C19orf47-201ENST00000357884 CCER1Q8TC90 406 aaPredicted RBP25.94■■□□□ 1.74
C19orf47-201ENST00000357884 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
C19orf47-201ENST00000357884 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
C19orf47-201ENST00000357884 NUP160Q12769 1436 aa25.89■■□□□ 1.74
C19orf47-201ENST00000357884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.89■■□□□ 1.73
C19orf47-201ENST00000357884 SAMD9Q5K651 1589 aa25.89■■□□□ 1.73
C19orf47-201ENST00000357884 IQGAP2Q13576 1575 aa25.88■■□□□ 1.73
C19orf47-201ENST00000357884 KIAA0586Q9BVV6 1533 aa25.85■■□□□ 1.73
C19orf47-201ENST00000357884 MAP3K1Q13233 1512 aa25.82■■□□□ 1.72
C19orf47-201ENST00000357884 FHOD3Q2V2M9 1422 aa25.82■■□□□ 1.72
C19orf47-201ENST00000357884 FMN1Q68DA7 1419 aa25.82■■□□□ 1.72
C19orf47-201ENST00000357884 UGGT2Q9NYU1 1516 aa25.79■■□□□ 1.72
C19orf47-201ENST00000357884 FYCO1Q9BQS8 1478 aa25.77■■□□□ 1.72
C19orf47-201ENST00000357884 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
C19orf47-201ENST00000357884 P3H3Q8IVL6 736 aa25.76■■□□□ 1.71
C19orf47-201ENST00000357884 CASKIN1Q8WXD9 1431 aa25.75■■□□□ 1.71
C19orf47-201ENST00000357884 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
C19orf47-201ENST00000357884 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
C19orf47-201ENST00000357884 CLASP1Q7Z460 1538 aa25.72■■□□□ 1.71
C19orf47-201ENST00000357884 TIAM1Q13009 1591 aa25.7■■□□□ 1.7
C19orf47-201ENST00000357884 CFAP43Q8NDM7 1665 aa25.63■■□□□ 1.69
C19orf47-201ENST00000357884 PRG4Q92954 1404 aaPredicted RBP25.62■■□□□ 1.69
C19orf47-201ENST00000357884 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
C19orf47-201ENST00000357884 DISP1Q96F81 1524 aa25.61■■□□□ 1.69
C19orf47-201ENST00000357884 KIAA0556O60303 1618 aa25.61■■□□□ 1.69
C19orf47-201ENST00000357884 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
C19orf47-201ENST00000357884 LRRC9Q6ZRR7 1453 aa25.59■■□□□ 1.69
C19orf47-201ENST00000357884 CARMIL2Q6F5E8 1435 aa25.58■■□□□ 1.69
C19orf47-201ENST00000357884 RRBP1Q9P2E9 1410 aaKnown RBP25.55■■□□□ 1.68
C19orf47-201ENST00000357884 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
C19orf47-201ENST00000357884 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
C19orf47-201ENST00000357884 HECW1Q76N89 1606 aa25.51■■□□□ 1.67
C19orf47-201ENST00000357884 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
C19orf47-201ENST00000357884 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
C19orf47-201ENST00000357884 HNRNPUL2Q1KMD3 747 aaKnown RBP25.49■■□□□ 1.67
C19orf47-201ENST00000357884 PTPRGP23470 1445 aa25.41■■□□□ 1.66
C19orf47-201ENST00000357884 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
C19orf47-201ENST00000357884 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
C19orf47-201ENST00000357884 MTUS2Q5JR59 1369 aa25.38■■□□□ 1.65
C19orf47-201ENST00000357884 LRRIQ1Q96JM4 1722 aa25.38■■□□□ 1.65
C19orf47-201ENST00000357884 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
C19orf47-201ENST00000357884 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
C19orf47-201ENST00000357884 RAPGEF6Q8TEU7 1601 aa25.36■■□□□ 1.65
C19orf47-201ENST00000357884 RIMBP3CA6NJZ7 1639 aa25.33■■□□□ 1.65
C19orf47-201ENST00000357884 RIMBP3BA6NNM3 1639 aa25.33■■□□□ 1.65
C19orf47-201ENST00000357884 RIMBP3Q9UFD9 1639 aa25.33■■□□□ 1.65
C19orf47-201ENST00000357884 PHLDB1Q86UU1 1377 aa25.32■■□□□ 1.64
C19orf47-201ENST00000357884 NUP153P49790 1475 aaKnown RBP25.31■■□□□ 1.64
C19orf47-201ENST00000357884 ZNF316A6NFI3 1004 aaPredicted RBP25.31■■□□□ 1.64
C19orf47-201ENST00000357884 DIEXFQ68CQ4 756 aaKnown RBP25.3■■□□□ 1.64
C19orf47-201ENST00000357884 PLB1Q6P1J6 1458 aa25.28■■□□□ 1.64
C19orf47-201ENST00000357884 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
C19orf47-201ENST00000357884 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
C19orf47-201ENST00000357884 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
C19orf47-201ENST00000357884 CDK13Q14004 1512 aaKnown RBP25.26■■□□□ 1.63
C19orf47-201ENST00000357884 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
C19orf47-201ENST00000357884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
C19orf47-201ENST00000357884 ABCA8O94911 1581 aa25.25■■□□□ 1.63
C19orf47-201ENST00000357884 ARID3CA6NKF2 412 aa25.24■■□□□ 1.63
C19orf47-201ENST00000357884 MAGI3Q5TCQ9 1506 aa25.24■■□□□ 1.63
C19orf47-201ENST00000357884 NCOA2Q15596 1464 aa25.23■■□□□ 1.63
C19orf47-201ENST00000357884 CDK11AQ9UQ88 783 aaPredicted RBP25.23■■□□□ 1.63
C19orf47-201ENST00000357884 UACAQ9BZF9 1416 aa25.23■■□□□ 1.63
C19orf47-201ENST00000357884 MYOM3Q5VTT5 1437 aa25.18■■□□□ 1.62
C19orf47-201ENST00000357884 FGD6Q6ZV73 1430 aa25.18■■□□□ 1.62
C19orf47-201ENST00000357884 ABCC2Q92887 1545 aa25.13■■□□□ 1.61
C19orf47-201ENST00000357884 TROQ12816 1431 aaPredicted RBP25.11■■□□□ 1.61
C19orf47-201ENST00000357884 ADCY10Q96PN6 1610 aa25.09■■□□□ 1.61
C19orf47-201ENST00000357884 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
C19orf47-201ENST00000357884 MIA2Q96PC5 1412 aa25.08■■□□□ 1.61
C19orf47-201ENST00000357884 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.6
C19orf47-201ENST00000357884 ATP10BO94823 1461 aa25.07■■□□□ 1.6
C19orf47-201ENST00000357884 NPM1P06748 294 aaKnown RBP eCLIP25.06■■□□□ 1.6
C19orf47-201ENST00000357884 TCOF1Q13428 1488 aaKnown RBP25.04■■□□□ 1.6
C19orf47-201ENST00000357884 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
C19orf47-201ENST00000357884 PLEKHD1A6NEE1 506 aa25■■□□□ 1.59
C19orf47-201ENST00000357884 PTPN23Q9H3S7 1636 aa25■■□□□ 1.59
C19orf47-201ENST00000357884 KDM5BQ9UGL1 1544 aa25■■□□□ 1.59
C19orf47-201ENST00000357884 RAB3GAP2Q9H2M9 1393 aa24.98■■□□□ 1.59
C19orf47-201ENST00000357884 ZCCHC11Q5TAX3 1644 aaKnown RBP24.98■■□□□ 1.59
C19orf47-201ENST00000357884 ITGAEP38570 1179 aa24.97■■□□□ 1.59
C19orf47-201ENST00000357884 CENPBP07199 599 aaPredicted RBP24.94■■□□□ 1.58
C19orf47-201ENST00000357884 KIF14Q15058 1648 aa24.93■■□□□ 1.58
C19orf47-201ENST00000357884 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
C19orf47-201ENST00000357884 ITSN2Q9NZM3 1697 aa24.91■■□□□ 1.58
C19orf47-201ENST00000357884 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
C19orf47-201ENST00000357884 MAPKBP1O60336 1514 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms