RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 IGF1RP08069 1367 aa27.01■■□□□ 1.91
COPS7B-202ENST00000357490 PRG4Q92954 1404 aaPredicted RBP26.96■■□□□ 1.91
COPS7B-202ENST00000357490 JPH4Q96JJ6 628 aa26.94■■□□□ 1.9
COPS7B-202ENST00000357490 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
COPS7B-202ENST00000357490 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
COPS7B-202ENST00000357490 FAM9AQ8IZU1 332 aaPredicted RBP26.8■■□□□ 1.88
COPS7B-202ENST00000357490 EEA1Q15075 1411 aa26.76■■□□□ 1.87
COPS7B-202ENST00000357490 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
COPS7B-202ENST00000357490 KIF13AQ9H1H9 1805 aa26.74■■□□□ 1.87
COPS7B-202ENST00000357490 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
COPS7B-202ENST00000357490 PRXQ9BXM0 1461 aa26.68■■□□□ 1.86
COPS7B-202ENST00000357490 ADCY10Q96PN6 1610 aa26.68■■□□□ 1.86
COPS7B-202ENST00000357490 NPM1P06748 294 aaKnown RBP eCLIP26.66■■□□□ 1.86
COPS7B-202ENST00000357490 IQGAP2Q13576 1575 aa26.66■■□□□ 1.86
COPS7B-202ENST00000357490 MAPKBP1O60336 1514 aa26.64■■□□□ 1.85
COPS7B-202ENST00000357490 CARMIL2Q6F5E8 1435 aa26.61■■□□□ 1.85
COPS7B-202ENST00000357490 PTPRGP23470 1445 aa26.56■■□□□ 1.84
COPS7B-202ENST00000357490 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
COPS7B-202ENST00000357490 TNIKQ9UKE5 1360 aa26.53■■□□□ 1.84
COPS7B-202ENST00000357490 DIP2BQ9P265 1576 aa26.53■■□□□ 1.84
COPS7B-202ENST00000357490 KIF21BO75037 1637 aa26.49■■□□□ 1.83
COPS7B-202ENST00000357490 CTTNBP2Q8WZ74 1663 aa26.48■■□□□ 1.83
COPS7B-202ENST00000357490 FAM69CQ0P6D2 419 aa26.48■■□□□ 1.83
COPS7B-202ENST00000357490 UGGT2Q9NYU1 1516 aa26.47■■□□□ 1.83
COPS7B-202ENST00000357490 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
COPS7B-202ENST00000357490 DISP1Q96F81 1524 aa26.45■■□□□ 1.83
COPS7B-202ENST00000357490 ABCC2Q92887 1545 aa26.44■■□□□ 1.82
COPS7B-202ENST00000357490 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
COPS7B-202ENST00000357490 UHRF1BP1LA0JNW5 1464 aa26.41■■□□□ 1.82
COPS7B-202ENST00000357490 KIAA0556O60303 1618 aa26.39■■□□□ 1.82
COPS7B-202ENST00000357490 TSPOAP1O95153 1857 aa26.39■■□□□ 1.82
COPS7B-202ENST00000357490 UACAQ9BZF9 1416 aa26.38■■□□□ 1.81
COPS7B-202ENST00000357490 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
COPS7B-202ENST00000357490 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
COPS7B-202ENST00000357490 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
COPS7B-202ENST00000357490 AEBP2Q6ZN18 517 aaPredicted RBP26.32■■□□□ 1.8
COPS7B-202ENST00000357490 ASXL2Q76L83 1435 aa26.31■■□□□ 1.8
COPS7B-202ENST00000357490 KDM6BO15054 1643 aa26.28■■□□□ 1.8
COPS7B-202ENST00000357490 KDM5BQ9UGL1 1544 aa26.28■■□□□ 1.8
COPS7B-202ENST00000357490 GLI2P10070 1586 aa26.27■■□□□ 1.8
COPS7B-202ENST00000357490 ZCCHC11Q5TAX3 1644 aaKnown RBP26.26■■□□□ 1.79
COPS7B-202ENST00000357490 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
COPS7B-202ENST00000357490 PPRC1Q5VV67 1664 aaKnown RBP26.18■■□□□ 1.78
COPS7B-202ENST00000357490 EPRSP07814 1512 aaKnown RBP26.14■■□□□ 1.78
COPS7B-202ENST00000357490 MAP3K4Q9Y6R4 1608 aa26.14■■□□□ 1.78
COPS7B-202ENST00000357490 LOC105371045A0A1W2PR82 267 aa26.14■■□□□ 1.78
COPS7B-202ENST00000357490 ABCA8O94911 1581 aa26.13■■□□□ 1.77
COPS7B-202ENST00000357490 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
COPS7B-202ENST00000357490 SAMD9Q5K651 1589 aa26.09■■□□□ 1.77
COPS7B-202ENST00000357490 WDR7Q9Y4E6 1490 aa26.09■■□□□ 1.77
COPS7B-202ENST00000357490 TEX14Q8IWB6 1497 aa26.06■■□□□ 1.76
COPS7B-202ENST00000357490 EFCAB5A4FU69 1503 aa26.01■■□□□ 1.75
COPS7B-202ENST00000357490 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.75
COPS7B-202ENST00000357490 FHOD3Q2V2M9 1422 aa25.99■■□□□ 1.75
COPS7B-202ENST00000357490 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
COPS7B-202ENST00000357490 RAPGEF6Q8TEU7 1601 aa25.92■■□□□ 1.74
COPS7B-202ENST00000357490 CLIP1P30622 1438 aa25.91■■□□□ 1.74
COPS7B-202ENST00000357490 CD109Q6YHK3 1445 aa25.9■■□□□ 1.74
COPS7B-202ENST00000357490 MAGI3Q5TCQ9 1506 aa25.9■■□□□ 1.74
COPS7B-202ENST00000357490 KCNH8Q96L42 1107 aa25.9■■□□□ 1.74
COPS7B-202ENST00000357490 COL17A1Q9UMD9 1497 aaPredicted RBP25.89■■□□□ 1.73
COPS7B-202ENST00000357490 ATP10BO94823 1461 aa25.87■■□□□ 1.73
COPS7B-202ENST00000357490 CEP162Q5TB80 1403 aa25.87■■□□□ 1.73
COPS7B-202ENST00000357490 KDM4FA0A1W2PPD8 638 aa25.83■■□□□ 1.73
COPS7B-202ENST00000357490 ARID3CA6NKF2 412 aa25.81■■□□□ 1.72
COPS7B-202ENST00000357490 ABCA9Q8IUA7 1624 aa25.8■■□□□ 1.72
COPS7B-202ENST00000357490 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
COPS7B-202ENST00000357490 NUP153P49790 1475 aaKnown RBP25.76■■□□□ 1.71
COPS7B-202ENST00000357490 ADGRL1O94910 1474 aa25.73■■□□□ 1.71
COPS7B-202ENST00000357490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
COPS7B-202ENST00000357490 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
COPS7B-202ENST00000357490 ARAP3Q8WWN8 1544 aa25.71■■□□□ 1.71
COPS7B-202ENST00000357490 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
COPS7B-202ENST00000357490 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
COPS7B-202ENST00000357490 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.69
COPS7B-202ENST00000357490 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
COPS7B-202ENST00000357490 NEO1Q92859 1461 aa25.63■■□□□ 1.69
COPS7B-202ENST00000357490 HECW1Q76N89 1606 aa25.63■■□□□ 1.69
COPS7B-202ENST00000357490 PLEKHD1A6NEE1 506 aa25.61■■□□□ 1.69
COPS7B-202ENST00000357490 CDK13Q14004 1512 aaKnown RBP25.58■■□□□ 1.69
COPS7B-202ENST00000357490 LRRIQ1Q96JM4 1722 aa25.57■■□□□ 1.68
COPS7B-202ENST00000357490 FYCO1Q9BQS8 1478 aa25.56■■□□□ 1.68
COPS7B-202ENST00000357490 CFAP74Q9C0B2 1584 aa25.56■■□□□ 1.68
COPS7B-202ENST00000357490 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
COPS7B-202ENST00000357490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.52■■□□□ 1.68
COPS7B-202ENST00000357490 TTC37Q6PGP7 1564 aa25.49■■□□□ 1.67
COPS7B-202ENST00000357490 FRMPD1Q5SYB0 1578 aa25.48■■□□□ 1.67
COPS7B-202ENST00000357490 RAPGEF3O95398 923 aa25.47■■□□□ 1.67
COPS7B-202ENST00000357490 FANCAO15360 1455 aa25.47■■□□□ 1.67
COPS7B-202ENST00000357490 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
COPS7B-202ENST00000357490 RICTORQ6R327 1708 aa25.46■■□□□ 1.67
COPS7B-202ENST00000357490 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
COPS7B-202ENST00000357490 AKNAQ7Z591 1439 aa25.43■■□□□ 1.66
COPS7B-202ENST00000357490 DENND4BO75064 1496 aaPredicted RBP25.42■■□□□ 1.66
COPS7B-202ENST00000357490 MYO5CQ9NQX4 1742 aa25.41■■□□□ 1.66
COPS7B-202ENST00000357490 ARHGEF40Q8TER5 1519 aa25.38■■□□□ 1.65
COPS7B-202ENST00000357490 ADAMTSL3P82987 1691 aa25.37■■□□□ 1.65
COPS7B-202ENST00000357490 HECW2Q9P2P5 1572 aa25.36■■□□□ 1.65
COPS7B-202ENST00000357490 KIF14Q15058 1648 aa25.36■■□□□ 1.65
COPS7B-202ENST00000357490 TROQ12816 1431 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms