RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 IGF1RP08069 1367 aa10.09□□□□□ -0.79
KRT39-201ENST00000355612 RAD54L2Q9Y4B4 1467 aa10.08□□□□□ -0.8
KRT39-201ENST00000355612 CARMIL1Q5VZK9 1371 aa10.07□□□□□ -0.8
KRT39-201ENST00000355612 ABCA5Q8WWZ7 1642 aa10.06□□□□□ -0.8
KRT39-201ENST00000355612 APLP2Q06481 763 aa10.06□□□□□ -0.8
KRT39-201ENST00000355612 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
KRT39-201ENST00000355612 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
KRT39-201ENST00000355612 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
KRT39-201ENST00000355612 CTTNBP2Q8WZ74 1663 aa10.05□□□□□ -0.8
KRT39-201ENST00000355612 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.81
KRT39-201ENST00000355612 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
KRT39-201ENST00000355612 TARBP1Q13395 1621 aaKnown RBP10.02□□□□□ -0.81
KRT39-201ENST00000355612 ARHGAP35Q9NRY4 1499 aa10.01□□□□□ -0.81
KRT39-201ENST00000355612 PBRM1Q86U86 1689 aa10□□□□□ -0.81
KRT39-201ENST00000355612 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
KRT39-201ENST00000355612 SCAF1Q9H7N4 1312 aaKnown RBP9.98□□□□□ -0.81
KRT39-201ENST00000355612 EFCAB5A4FU69 1503 aa9.98□□□□□ -0.81
KRT39-201ENST00000355612 WDR62O43379 1518 aa9.97□□□□□ -0.81
KRT39-201ENST00000355612 TDRD9Q8NDG6 1382 aaKnown RBP9.95□□□□□ -0.82
KRT39-201ENST00000355612 FHAD1B1AJZ9 1412 aa9.94□□□□□ -0.82
KRT39-201ENST00000355612 FKBP8Q14318 412 aa9.93□□□□□ -0.82
KRT39-201ENST00000355612 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
KRT39-201ENST00000355612 CFAP43Q8NDM7 1665 aa9.93□□□□□ -0.82
KRT39-201ENST00000355612 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
KRT39-201ENST00000355612 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
KRT39-201ENST00000355612 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
KRT39-201ENST00000355612 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
KRT39-201ENST00000355612 PCF11O94913 1555 aaKnown RBP9.91□□□□□ -0.82
KRT39-201ENST00000355612 CCER1Q8TC90 406 aaPredicted RBP9.9□□□□□ -0.82
KRT39-201ENST00000355612 THOC2Q8NI27 1593 aaKnown RBP9.9□□□□□ -0.82
KRT39-201ENST00000355612 SAMD9Q5K651 1589 aa9.9□□□□□ -0.83
KRT39-201ENST00000355612 GRIN2BQ13224 1484 aa9.89□□□□□ -0.83
KRT39-201ENST00000355612 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
KRT39-201ENST00000355612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.88□□□□□ -0.83
KRT39-201ENST00000355612 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.83
KRT39-201ENST00000355612 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
KRT39-201ENST00000355612 FHOD3Q2V2M9 1422 aa9.86□□□□□ -0.83
KRT39-201ENST00000355612 FMN1Q68DA7 1419 aa9.86□□□□□ -0.83
KRT39-201ENST00000355612 MAPK8IP2Q13387 824 aaPredicted RBP9.86□□□□□ -0.83
KRT39-201ENST00000355612 KANK4Q5T7N3 995 aaPredicted RBP9.85□□□□□ -0.83
KRT39-201ENST00000355612 CASKIN1Q8WXD9 1431 aa9.85□□□□□ -0.83
KRT39-201ENST00000355612 IQGAP2Q13576 1575 aa9.85□□□□□ -0.83
KRT39-201ENST00000355612 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
KRT39-201ENST00000355612 RRBP1Q9P2E9 1410 aaKnown RBP9.84□□□□□ -0.83
KRT39-201ENST00000355612 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
KRT39-201ENST00000355612 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
KRT39-201ENST00000355612 P3H3Q8IVL6 736 aa9.83□□□□□ -0.84
KRT39-201ENST00000355612 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
KRT39-201ENST00000355612 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
KRT39-201ENST00000355612 CCNB3Q8WWL7 1395 aa9.8□□□□□ -0.84
KRT39-201ENST00000355612 MAGI1Q96QZ7 1491 aaPredicted RBP9.8□□□□□ -0.84
KRT39-201ENST00000355612 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
KRT39-201ENST00000355612 ATP1B4Q9UN42 357 aaPredicted RBP9.79□□□□□ -0.84
KRT39-201ENST00000355612 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
KRT39-201ENST00000355612 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
KRT39-201ENST00000355612 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
KRT39-201ENST00000355612 SLC4A2P04920 1241 aa9.77□□□□□ -0.84
KRT39-201ENST00000355612 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
KRT39-201ENST00000355612 KIAA0586Q9BVV6 1533 aa9.76□□□□□ -0.85
KRT39-201ENST00000355612 SUPT6HQ7KZ85 1726 aaKnown RBP9.76□□□□□ -0.85
KRT39-201ENST00000355612 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
KRT39-201ENST00000355612 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
KRT39-201ENST00000355612 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
KRT39-201ENST00000355612 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
KRT39-201ENST00000355612 MTUS2Q5JR59 1369 aa9.73□□□□□ -0.85
KRT39-201ENST00000355612 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
KRT39-201ENST00000355612 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
KRT39-201ENST00000355612 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.86
KRT39-201ENST00000355612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
KRT39-201ENST00000355612 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
KRT39-201ENST00000355612 DISP1Q96F81 1524 aa9.69□□□□□ -0.86
KRT39-201ENST00000355612 RAPGEF6Q8TEU7 1601 aa9.69□□□□□ -0.86
KRT39-201ENST00000355612 EPRSP07814 1512 aaKnown RBP9.69□□□□□ -0.86
KRT39-201ENST00000355612 NCOA2Q15596 1464 aa9.69□□□□□ -0.86
KRT39-201ENST00000355612 FGD6Q6ZV73 1430 aa9.68□□□□□ -0.86
KRT39-201ENST00000355612 ITGAEP38570 1179 aa9.68□□□□□ -0.86
KRT39-201ENST00000355612 FAM50AQ14320 339 aaKnown RBP9.68□□□□□ -0.86
KRT39-201ENST00000355612 NUP160Q12769 1436 aa9.67□□□□□ -0.86
KRT39-201ENST00000355612 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
KRT39-201ENST00000355612 MYOM3Q5VTT5 1437 aa9.66□□□□□ -0.86
KRT39-201ENST00000355612 ARHGEF11O15085 1522 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 MAGI3Q5TCQ9 1506 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 FBLN2P98095 1184 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 SETD5Q9C0A6 1442 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 CHD1O14646 1710 aa9.65□□□□□ -0.86
KRT39-201ENST00000355612 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
KRT39-201ENST00000355612 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
KRT39-201ENST00000355612 RAB3GAP2Q9H2M9 1393 aa9.63□□□□□ -0.87
KRT39-201ENST00000355612 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
KRT39-201ENST00000355612 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
KRT39-201ENST00000355612 ITSN2Q9NZM3 1697 aa9.6□□□□□ -0.87
KRT39-201ENST00000355612 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
KRT39-201ENST00000355612 MIA2Q96PC5 1412 aa9.59□□□□□ -0.87
KRT39-201ENST00000355612 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
KRT39-201ENST00000355612 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
KRT39-201ENST00000355612 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
KRT39-201ENST00000355612 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
KRT39-201ENST00000355612 MAPKBP1O60336 1514 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms