RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
KRT39-201ENST00000355612 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
KRT39-201ENST00000355612 AEBP2Q6ZN18 517 aaPredicted RBP14.06□□□□□ -0.16
KRT39-201ENST00000355612 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
KRT39-201ENST00000355612 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
KRT39-201ENST00000355612 ZCCHC6Q5VYS8 1495 aaKnown RBP12.08□□□□□ -0.48
KRT39-201ENST00000355612 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
KRT39-201ENST00000355612 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
KRT39-201ENST00000355612 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
KRT39-201ENST00000355612 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
KRT39-201ENST00000355612 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
KRT39-201ENST00000355612 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.55
KRT39-201ENST00000355612 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
KRT39-201ENST00000355612 ABCC9O60706 1549 aa11.56□□□□□ -0.56
KRT39-201ENST00000355612 NACADO15069 1562 aa11.54□□□□□ -0.56
KRT39-201ENST00000355612 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
KRT39-201ENST00000355612 SUPT5HO00267 1087 aaKnown RBP11.45□□□□□ -0.58
KRT39-201ENST00000355612 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
KRT39-201ENST00000355612 KCNA4P22459 653 aa11.4□□□□□ -0.59
KRT39-201ENST00000355612 ADRA2BP18089 450 aa11.33□□□□□ -0.6
KRT39-201ENST00000355612 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
KRT39-201ENST00000355612 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
KRT39-201ENST00000355612 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
KRT39-201ENST00000355612 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
KRT39-201ENST00000355612 PPP6R1Q9UPN7 881 aa11.08□□□□□ -0.64
KRT39-201ENST00000355612 BAZ1AQ9NRL2 1556 aaPredicted RBP11.07□□□□□ -0.64
KRT39-201ENST00000355612 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
KRT39-201ENST00000355612 WIZO95785 1651 aa11.03□□□□□ -0.64
KRT39-201ENST00000355612 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
KRT39-201ENST00000355612 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
KRT39-201ENST00000355612 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
KRT39-201ENST00000355612 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
KRT39-201ENST00000355612 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
KRT39-201ENST00000355612 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
KRT39-201ENST00000355612 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
KRT39-201ENST00000355612 FOXD1Q16676 465 aa10.82□□□□□ -0.68
KRT39-201ENST00000355612 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
KRT39-201ENST00000355612 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
KRT39-201ENST00000355612 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
KRT39-201ENST00000355612 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
KRT39-201ENST00000355612 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
KRT39-201ENST00000355612 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
KRT39-201ENST00000355612 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.69
KRT39-201ENST00000355612 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
KRT39-201ENST00000355612 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
KRT39-201ENST00000355612 ABCC8Q09428 1581 aa10.63□□□□□ -0.71
KRT39-201ENST00000355612 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
KRT39-201ENST00000355612 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
KRT39-201ENST00000355612 NCBP3Q53F19 620 aaKnown RBP10.57□□□□□ -0.72
KRT39-201ENST00000355612 FAM9AQ8IZU1 332 aaPredicted RBP10.56□□□□□ -0.72
KRT39-201ENST00000355612 ZBTB22O15209 634 aa10.55□□□□□ -0.72
KRT39-201ENST00000355612 WRNQ14191 1432 aaPredicted RBP eCLIP10.52□□□□□ -0.72
KRT39-201ENST00000355612 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
KRT39-201ENST00000355612 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
KRT39-201ENST00000355612 EEA1Q15075 1411 aa10.5□□□□□ -0.73
KRT39-201ENST00000355612 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
KRT39-201ENST00000355612 SYNJ1O43426 1573 aa10.49□□□□□ -0.73
KRT39-201ENST00000355612 RTN4Q9NQC3 1192 aaKnown RBP10.48□□□□□ -0.73
KRT39-201ENST00000355612 TOP2BQ02880 1626 aa10.45□□□□□ -0.74
KRT39-201ENST00000355612 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
KRT39-201ENST00000355612 CFTRP13569 1480 aa10.43□□□□□ -0.74
KRT39-201ENST00000355612 SOGA1O94964 1423 aa10.43□□□□□ -0.74
KRT39-201ENST00000355612 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
KRT39-201ENST00000355612 KIF21BO75037 1637 aa10.37□□□□□ -0.75
KRT39-201ENST00000355612 RUSC2Q8N2Y8 1516 aa10.37□□□□□ -0.75
KRT39-201ENST00000355612 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
KRT39-201ENST00000355612 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
KRT39-201ENST00000355612 PCGF6Q9BYE7 350 aa10.36□□□□□ -0.75
KRT39-201ENST00000355612 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
KRT39-201ENST00000355612 CUX1P39880 1505 aa10.35□□□□□ -0.75
KRT39-201ENST00000355612 CEP164Q9UPV0 1460 aa10.34□□□□□ -0.75
KRT39-201ENST00000355612 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
KRT39-201ENST00000355612 TNIKQ9UKE5 1360 aa10.33□□□□□ -0.76
KRT39-201ENST00000355612 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
KRT39-201ENST00000355612 CEP162Q5TB80 1403 aa10.31□□□□□ -0.76
KRT39-201ENST00000355612 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
KRT39-201ENST00000355612 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.77
KRT39-201ENST00000355612 ERICH3Q5RHP9 1530 aa10.26□□□□□ -0.77
KRT39-201ENST00000355612 FANCD2Q9BXW9 1451 aa10.25□□□□□ -0.77
KRT39-201ENST00000355612 KIF27Q86VH2 1401 aa10.25□□□□□ -0.77
KRT39-201ENST00000355612 DNMBPQ6XZF7 1577 aa10.23□□□□□ -0.77
KRT39-201ENST00000355612 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
KRT39-201ENST00000355612 HRCP23327 699 aa10.22□□□□□ -0.77
KRT39-201ENST00000355612 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.77
KRT39-201ENST00000355612 PRXQ9BXM0 1461 aa10.21□□□□□ -0.78
KRT39-201ENST00000355612 NESP48681 1621 aa10.2□□□□□ -0.78
KRT39-201ENST00000355612 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
KRT39-201ENST00000355612 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
KRT39-201ENST00000355612 CLIP1P30622 1438 aa10.19□□□□□ -0.78
KRT39-201ENST00000355612 CUX2O14529 1486 aa10.18□□□□□ -0.78
KRT39-201ENST00000355612 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
KRT39-201ENST00000355612 PDS5BQ9NTI5 1447 aa10.15□□□□□ -0.78
KRT39-201ENST00000355612 KIF21AQ7Z4S6 1674 aa10.15□□□□□ -0.78
KRT39-201ENST00000355612 VPS8Q8N3P4 1428 aa10.13□□□□□ -0.79
KRT39-201ENST00000355612 POLA1P09884 1462 aaPredicted RBP10.13□□□□□ -0.79
KRT39-201ENST00000355612 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
KRT39-201ENST00000355612 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
KRT39-201ENST00000355612 CUL7Q14999 1698 aa10.11□□□□□ -0.79
KRT39-201ENST00000355612 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
KRT39-201ENST00000355612 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms