RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 WDR62O43379 1518 aa23.37■■□□□ 1.33
TUFT1-201ENST00000353024 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
TUFT1-201ENST00000353024 FHAD1B1AJZ9 1412 aa23.36■■□□□ 1.33
TUFT1-201ENST00000353024 TIAM1Q13009 1591 aa23.36■■□□□ 1.33
TUFT1-201ENST00000353024 RRBP1Q9P2E9 1410 aaKnown RBP23.35■■□□□ 1.33
TUFT1-201ENST00000353024 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.33
TUFT1-201ENST00000353024 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
TUFT1-201ENST00000353024 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
TUFT1-201ENST00000353024 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.32
TUFT1-201ENST00000353024 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
TUFT1-201ENST00000353024 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
TUFT1-201ENST00000353024 SAMD9Q5K651 1589 aa23.28■■□□□ 1.32
TUFT1-201ENST00000353024 LRRC9Q6ZRR7 1453 aa23.27■■□□□ 1.32
TUFT1-201ENST00000353024 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.31
TUFT1-201ENST00000353024 ADAMTS12P58397 1594 aa23.26■■□□□ 1.31
TUFT1-201ENST00000353024 FYCO1Q9BQS8 1478 aa23.26■■□□□ 1.31
TUFT1-201ENST00000353024 CASKIN1Q8WXD9 1431 aa23.25■■□□□ 1.31
TUFT1-201ENST00000353024 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
TUFT1-201ENST00000353024 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
TUFT1-201ENST00000353024 CCNB3Q8WWL7 1395 aa23.21■■□□□ 1.31
TUFT1-201ENST00000353024 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
TUFT1-201ENST00000353024 SNAPC4Q5SXM2 1469 aa23.19■■□□□ 1.3
TUFT1-201ENST00000353024 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
TUFT1-201ENST00000353024 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
TUFT1-201ENST00000353024 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
TUFT1-201ENST00000353024 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
TUFT1-201ENST00000353024 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
TUFT1-201ENST00000353024 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
TUFT1-201ENST00000353024 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
TUFT1-201ENST00000353024 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.28
TUFT1-201ENST00000353024 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
TUFT1-201ENST00000353024 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
TUFT1-201ENST00000353024 KIAA0586Q9BVV6 1533 aa22.98■■□□□ 1.27
TUFT1-201ENST00000353024 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
TUFT1-201ENST00000353024 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
TUFT1-201ENST00000353024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.94■■□□□ 1.26
TUFT1-201ENST00000353024 ITGAEP38570 1179 aa22.92■■□□□ 1.26
TUFT1-201ENST00000353024 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
TUFT1-201ENST00000353024 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
TUFT1-201ENST00000353024 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
TUFT1-201ENST00000353024 CCDC18Q5T9S5 1454 aa22.9■■□□□ 1.26
TUFT1-201ENST00000353024 HECW1Q76N89 1606 aa22.89■■□□□ 1.25
TUFT1-201ENST00000353024 EHBP1L1Q8N3D4 1523 aa22.88■■□□□ 1.25
TUFT1-201ENST00000353024 FGD6Q6ZV73 1430 aa22.88■■□□□ 1.25
TUFT1-201ENST00000353024 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
TUFT1-201ENST00000353024 KIAA0556O60303 1618 aa22.87■■□□□ 1.25
TUFT1-201ENST00000353024 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
TUFT1-201ENST00000353024 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
TUFT1-201ENST00000353024 NCOA2Q15596 1464 aa22.86■■□□□ 1.25
TUFT1-201ENST00000353024 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
TUFT1-201ENST00000353024 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
TUFT1-201ENST00000353024 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
TUFT1-201ENST00000353024 EPRSP07814 1512 aaKnown RBP22.84■■□□□ 1.25
TUFT1-201ENST00000353024 SUPT6HQ7KZ85 1726 aaKnown RBP22.83■■□□□ 1.25
TUFT1-201ENST00000353024 CHMP7Q8WUX9 453 aaPredicted RBP22.81■■□□□ 1.24
TUFT1-201ENST00000353024 NUP160Q12769 1436 aa22.81■■□□□ 1.24
TUFT1-201ENST00000353024 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
TUFT1-201ENST00000353024 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
TUFT1-201ENST00000353024 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
TUFT1-201ENST00000353024 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
TUFT1-201ENST00000353024 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
TUFT1-201ENST00000353024 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
TUFT1-201ENST00000353024 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
TUFT1-201ENST00000353024 DIEXFQ68CQ4 756 aaKnown RBP22.7■■□□□ 1.23
TUFT1-201ENST00000353024 FBLN2P98095 1184 aa22.69■■□□□ 1.22
TUFT1-201ENST00000353024 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
TUFT1-201ENST00000353024 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
TUFT1-201ENST00000353024 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
TUFT1-201ENST00000353024 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
TUFT1-201ENST00000353024 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
TUFT1-201ENST00000353024 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
TUFT1-201ENST00000353024 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
TUFT1-201ENST00000353024 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
TUFT1-201ENST00000353024 NAIPQ13075 1403 aa22.58■■□□□ 1.21
TUFT1-201ENST00000353024 ABCA8O94911 1581 aa22.52■■□□□ 1.2
TUFT1-201ENST00000353024 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.19
TUFT1-201ENST00000353024 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
TUFT1-201ENST00000353024 AKNAQ7Z591 1439 aa22.5■■□□□ 1.19
TUFT1-201ENST00000353024 UACAQ9BZF9 1416 aa22.5■■□□□ 1.19
TUFT1-201ENST00000353024 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
TUFT1-201ENST00000353024 CHD1O14646 1710 aa22.48■■□□□ 1.19
TUFT1-201ENST00000353024 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
TUFT1-201ENST00000353024 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
TUFT1-201ENST00000353024 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
TUFT1-201ENST00000353024 TIMELESSQ9UNS1 1208 aa22.42■■□□□ 1.18
TUFT1-201ENST00000353024 KIF14Q15058 1648 aa22.41■■□□□ 1.18
TUFT1-201ENST00000353024 ATP10BO94823 1461 aa22.41■■□□□ 1.18
TUFT1-201ENST00000353024 DNMT1P26358 1616 aaKnown RBP22.41■■□□□ 1.18
TUFT1-201ENST00000353024 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
TUFT1-201ENST00000353024 DAPK1P53355 1430 aa22.41■■□□□ 1.18
TUFT1-201ENST00000353024 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
TUFT1-201ENST00000353024 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
TUFT1-201ENST00000353024 ABCC5O15440 1437 aa22.4■■□□□ 1.18
TUFT1-201ENST00000353024 GPATCH8Q9UKJ3 1502 aaKnown RBP22.39■■□□□ 1.18
TUFT1-201ENST00000353024 KDM6BO15054 1643 aa22.38■■□□□ 1.17
TUFT1-201ENST00000353024 ZNF644Q9H582 1327 aaPredicted RBP22.38■■□□□ 1.17
TUFT1-201ENST00000353024 ROCK1Q13464 1354 aa22.38■■□□□ 1.17
TUFT1-201ENST00000353024 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
TUFT1-201ENST00000353024 ITSN2Q9NZM3 1697 aa22.37■■□□□ 1.17
TUFT1-201ENST00000353024 PTPRGP23470 1445 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms