RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
TUFT1-201ENST00000353024 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
TUFT1-201ENST00000353024 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
TUFT1-201ENST00000353024 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
TUFT1-201ENST00000353024 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
TUFT1-201ENST00000353024 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
TUFT1-201ENST00000353024 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
TUFT1-201ENST00000353024 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
TUFT1-201ENST00000353024 ABCC9O60706 1549 aa27.18■■□□□ 1.94
TUFT1-201ENST00000353024 NACADO15069 1562 aa27.03■■□□□ 1.92
TUFT1-201ENST00000353024 SCRIBQ14160 1630 aa26.95■■□□□ 1.91
TUFT1-201ENST00000353024 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
TUFT1-201ENST00000353024 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
TUFT1-201ENST00000353024 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
TUFT1-201ENST00000353024 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
TUFT1-201ENST00000353024 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
TUFT1-201ENST00000353024 MROH2BQ7Z745 1585 aa26.18■■□□□ 1.78
TUFT1-201ENST00000353024 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.76
TUFT1-201ENST00000353024 WIZO95785 1651 aa25.98■■□□□ 1.75
TUFT1-201ENST00000353024 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
TUFT1-201ENST00000353024 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
TUFT1-201ENST00000353024 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
TUFT1-201ENST00000353024 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
TUFT1-201ENST00000353024 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
TUFT1-201ENST00000353024 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
TUFT1-201ENST00000353024 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
TUFT1-201ENST00000353024 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
TUFT1-201ENST00000353024 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
TUFT1-201ENST00000353024 LOC105371045A0A1W2PR82 267 aa25.39■■□□□ 1.65
TUFT1-201ENST00000353024 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
TUFT1-201ENST00000353024 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
TUFT1-201ENST00000353024 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
TUFT1-201ENST00000353024 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
TUFT1-201ENST00000353024 NCAPD3P42695 1498 aa25■■□□□ 1.59
TUFT1-201ENST00000353024 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
TUFT1-201ENST00000353024 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
TUFT1-201ENST00000353024 SOGA1O94964 1423 aa24.78■■□□□ 1.56
TUFT1-201ENST00000353024 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
TUFT1-201ENST00000353024 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
TUFT1-201ENST00000353024 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
TUFT1-201ENST00000353024 EEA1Q15075 1411 aa24.72■■□□□ 1.55
TUFT1-201ENST00000353024 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
TUFT1-201ENST00000353024 CFTRP13569 1480 aa24.6■■□□□ 1.53
TUFT1-201ENST00000353024 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
TUFT1-201ENST00000353024 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
TUFT1-201ENST00000353024 TOP2BQ02880 1626 aa24.58■■□□□ 1.53
TUFT1-201ENST00000353024 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
TUFT1-201ENST00000353024 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
TUFT1-201ENST00000353024 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
TUFT1-201ENST00000353024 HRCP23327 699 aa24.46■■□□□ 1.51
TUFT1-201ENST00000353024 GOLGA3Q08378 1498 aa24.43■■□□□ 1.5
TUFT1-201ENST00000353024 CUX1P39880 1505 aa24.43■■□□□ 1.5
TUFT1-201ENST00000353024 PRDM2Q13029 1718 aa24.43■■□□□ 1.5
TUFT1-201ENST00000353024 KIF21BO75037 1637 aa24.41■■□□□ 1.5
TUFT1-201ENST00000353024 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
TUFT1-201ENST00000353024 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
TUFT1-201ENST00000353024 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
TUFT1-201ENST00000353024 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
TUFT1-201ENST00000353024 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
TUFT1-201ENST00000353024 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
TUFT1-201ENST00000353024 KIF27Q86VH2 1401 aa24.15■■□□□ 1.46
TUFT1-201ENST00000353024 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
TUFT1-201ENST00000353024 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
TUFT1-201ENST00000353024 PPARGC1BQ86YN6 1023 aaKnown RBP24.13■■□□□ 1.45
TUFT1-201ENST00000353024 CLIP1P30622 1438 aa24.08■■□□□ 1.44
TUFT1-201ENST00000353024 NESP48681 1621 aa24.07■■□□□ 1.44
TUFT1-201ENST00000353024 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
TUFT1-201ENST00000353024 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
TUFT1-201ENST00000353024 CUX2O14529 1486 aa23.99■■□□□ 1.43
TUFT1-201ENST00000353024 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
TUFT1-201ENST00000353024 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
TUFT1-201ENST00000353024 IGF1RP08069 1367 aa23.95■■□□□ 1.42
TUFT1-201ENST00000353024 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
TUFT1-201ENST00000353024 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
TUFT1-201ENST00000353024 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
TUFT1-201ENST00000353024 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
TUFT1-201ENST00000353024 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
TUFT1-201ENST00000353024 ARAP1Q96P48 1450 aa23.83■■□□□ 1.4
TUFT1-201ENST00000353024 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.4
TUFT1-201ENST00000353024 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
TUFT1-201ENST00000353024 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
TUFT1-201ENST00000353024 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
TUFT1-201ENST00000353024 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
TUFT1-201ENST00000353024 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
TUFT1-201ENST00000353024 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
TUFT1-201ENST00000353024 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
TUFT1-201ENST00000353024 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
TUFT1-201ENST00000353024 APLP2Q06481 763 aa23.63■■□□□ 1.37
TUFT1-201ENST00000353024 CUL7Q14999 1698 aa23.62■■□□□ 1.37
TUFT1-201ENST00000353024 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
TUFT1-201ENST00000353024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.57■■□□□ 1.36
TUFT1-201ENST00000353024 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
TUFT1-201ENST00000353024 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
TUFT1-201ENST00000353024 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
TUFT1-201ENST00000353024 KANK4Q5T7N3 995 aaPredicted RBP23.5■■□□□ 1.35
TUFT1-201ENST00000353024 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
TUFT1-201ENST00000353024 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
TUFT1-201ENST00000353024 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
TUFT1-201ENST00000353024 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
TUFT1-201ENST00000353024 EFCAB5A4FU69 1503 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms