RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 FHAD1B1AJZ9 1412 aa28.51■■■□□ 2.16
TRIM41-202ENST00000351937 TTBK1Q5TCY1 1321 aaPredicted RBP28.51■■■□□ 2.15
TRIM41-202ENST00000351937 ZNF608Q9ULD9 1512 aaPredicted RBP28.51■■■□□ 2.15
TRIM41-202ENST00000351937 EFCAB5A4FU69 1503 aa28.46■■■□□ 2.15
TRIM41-202ENST00000351937 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
TRIM41-202ENST00000351937 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
TRIM41-202ENST00000351937 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
TRIM41-202ENST00000351937 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
TRIM41-202ENST00000351937 FHOD3Q2V2M9 1422 aa28.3■■■□□ 2.12
TRIM41-202ENST00000351937 MAP3K1Q13233 1512 aa28.29■■■□□ 2.12
TRIM41-202ENST00000351937 SAMD9Q5K651 1589 aa28.29■■■□□ 2.12
TRIM41-202ENST00000351937 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.12
TRIM41-202ENST00000351937 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
TRIM41-202ENST00000351937 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
TRIM41-202ENST00000351937 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
TRIM41-202ENST00000351937 PCF11O94913 1555 aaKnown RBP28.2■■■□□ 2.11
TRIM41-202ENST00000351937 TIAM1Q13009 1591 aa28.2■■■□□ 2.11
TRIM41-202ENST00000351937 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
TRIM41-202ENST00000351937 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
TRIM41-202ENST00000351937 CASKIN1Q8WXD9 1431 aa28.19■■■□□ 2.1
TRIM41-202ENST00000351937 SYNJ2O15056 1496 aa28.16■■■□□ 2.1
TRIM41-202ENST00000351937 KIAA0586Q9BVV6 1533 aa28.14■■■□□ 2.09
TRIM41-202ENST00000351937 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
TRIM41-202ENST00000351937 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
TRIM41-202ENST00000351937 CFAP43Q8NDM7 1665 aa28.1■■■□□ 2.09
TRIM41-202ENST00000351937 UGGT2Q9NYU1 1516 aa28.1■■■□□ 2.09
TRIM41-202ENST00000351937 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
TRIM41-202ENST00000351937 ATP1B4Q9UN42 357 aaPredicted RBP28.06■■■□□ 2.08
TRIM41-202ENST00000351937 RRBP1Q9P2E9 1410 aaKnown RBP28.03■■■□□ 2.08
TRIM41-202ENST00000351937 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
TRIM41-202ENST00000351937 FBLN2P98095 1184 aa27.98■■■□□ 2.07
TRIM41-202ENST00000351937 NUP160Q12769 1436 aa27.97■■■□□ 2.07
TRIM41-202ENST00000351937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
TRIM41-202ENST00000351937 HNRNPUL2Q1KMD3 747 aaKnown RBP27.96■■■□□ 2.07
TRIM41-202ENST00000351937 DISP1Q96F81 1524 aa27.93■■■□□ 2.06
TRIM41-202ENST00000351937 CCER1Q8TC90 406 aaPredicted RBP27.92■■■□□ 2.06
TRIM41-202ENST00000351937 KIAA0556O60303 1618 aa27.92■■■□□ 2.06
TRIM41-202ENST00000351937 CCNB3Q8WWL7 1395 aa27.92■■■□□ 2.06
TRIM41-202ENST00000351937 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
TRIM41-202ENST00000351937 HECW1Q76N89 1606 aa27.86■■■□□ 2.05
TRIM41-202ENST00000351937 CCDC18Q5T9S5 1454 aa27.86■■■□□ 2.05
TRIM41-202ENST00000351937 PHLDB1Q86UU1 1377 aa27.85■■■□□ 2.05
TRIM41-202ENST00000351937 MTUS2Q5JR59 1369 aa27.82■■■□□ 2.04
TRIM41-202ENST00000351937 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
TRIM41-202ENST00000351937 CARMIL2Q6F5E8 1435 aa27.78■■■□□ 2.04
TRIM41-202ENST00000351937 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
TRIM41-202ENST00000351937 EHBP1L1Q8N3D4 1523 aa27.75■■■□□ 2.03
TRIM41-202ENST00000351937 CHD1O14646 1710 aa27.71■■■□□ 2.03
TRIM41-202ENST00000351937 RAPGEF6Q8TEU7 1601 aa27.69■■■□□ 2.02
TRIM41-202ENST00000351937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.021e-10■■□□□ 14
TRIM41-202ENST00000351937 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
TRIM41-202ENST00000351937 NCOA2Q15596 1464 aa27.67■■■□□ 2.02
TRIM41-202ENST00000351937 MAGI3Q5TCQ9 1506 aa27.67■■■□□ 2.02
TRIM41-202ENST00000351937 CDK13Q14004 1512 aaKnown RBP27.65■■■□□ 2.02
TRIM41-202ENST00000351937 NUP153P49790 1475 aaKnown RBP27.65■■■□□ 2.02
TRIM41-202ENST00000351937 FGD6Q6ZV73 1430 aa27.63■■■□□ 2.01
TRIM41-202ENST00000351937 FAM50AQ14320 339 aaKnown RBP27.63■■■□□ 2.01
TRIM41-202ENST00000351937 ARHGEF11O15085 1522 aa27.62■■■□□ 2.01
TRIM41-202ENST00000351937 ITGAEP38570 1179 aa27.61■■■□□ 2.01
TRIM41-202ENST00000351937 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
TRIM41-202ENST00000351937 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
TRIM41-202ENST00000351937 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
TRIM41-202ENST00000351937 ARID3CA6NKF2 412 aa27.54■■■□□ 2
TRIM41-202ENST00000351937 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
TRIM41-202ENST00000351937 SHROOM2Q13796 1616 aa27.53■■■□□ 2
TRIM41-202ENST00000351937 ABCA8O94911 1581 aa27.5■■□□□ 1.99
TRIM41-202ENST00000351937 PTPRGP23470 1445 aa27.46■■□□□ 1.99
TRIM41-202ENST00000351937 SETD5Q9C0A6 1442 aa27.46■■□□□ 1.99
TRIM41-202ENST00000351937 DHX57Q6P158 1386 aaKnown RBP27.46■■□□□ 1.99
TRIM41-202ENST00000351937 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.99
TRIM41-202ENST00000351937 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
TRIM41-202ENST00000351937 MIA2Q96PC5 1412 aa27.43■■□□□ 1.98
TRIM41-202ENST00000351937 RAB3GAP2Q9H2M9 1393 aa27.43■■□□□ 1.98
TRIM41-202ENST00000351937 TCOF1Q13428 1488 aaKnown RBP27.42■■□□□ 1.98
TRIM41-202ENST00000351937 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
TRIM41-202ENST00000351937 CLASP1Q7Z460 1538 aa27.42■■□□□ 1.98
TRIM41-202ENST00000351937 ATP10BO94823 1461 aa27.36■■□□□ 1.97
TRIM41-202ENST00000351937 PTPRKQ15262 1439 aa27.32■■□□□ 1.96
TRIM41-202ENST00000351937 ADCY10Q96PN6 1610 aa27.32■■□□□ 1.96
TRIM41-202ENST00000351937 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
TRIM41-202ENST00000351937 UACAQ9BZF9 1416 aa27.31■■□□□ 1.96
TRIM41-202ENST00000351937 ERCC6L2Q5T890 1561 aa27.29■■□□□ 1.96
TRIM41-202ENST00000351937 HFM1A2PYH4 1435 aa27.28■■□□□ 1.96
TRIM41-202ENST00000351937 KIF14Q15058 1648 aa27.24■■□□□ 1.95
TRIM41-202ENST00000351937 ITSN2Q9NZM3 1697 aa27.21■■□□□ 1.95
TRIM41-202ENST00000351937 GPATCH8Q9UKJ3 1502 aaKnown RBP27.21■■□□□ 1.95
TRIM41-202ENST00000351937 ABCC2Q92887 1545 aa27.2■■□□□ 1.94
TRIM41-202ENST00000351937 NAIPQ13075 1403 aa27.19■■□□□ 1.94
TRIM41-202ENST00000351937 AKNAQ7Z591 1439 aa27.17■■□□□ 1.94
TRIM41-202ENST00000351937 CFDP1Q9UEE9 299 aaPredicted RBP27.16■■□□□ 1.94
TRIM41-202ENST00000351937 ABCC10Q5T3U5 1492 aa27.16■■□□□ 1.94
TRIM41-202ENST00000351937 MAPKBP1O60336 1514 aa27.14■■□□□ 1.93
TRIM41-202ENST00000351937 DAPK1P53355 1430 aa27.13■■□□□ 1.93
TRIM41-202ENST00000351937 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
TRIM41-202ENST00000351937 UHRF1BP1LA0JNW5 1464 aa27.12■■□□□ 1.93
TRIM41-202ENST00000351937 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
TRIM41-202ENST00000351937 CAMSAP2Q08AD1 1489 aa27.1■■□□□ 1.93
TRIM41-202ENST00000351937 CHIC2Q9UKJ5 165 aa27.1■■□□□ 1.93
TRIM41-202ENST00000351937 ABCC5O15440 1437 aa27.1■■□□□ 1.93
TRIM41-202ENST00000351937 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms