RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 KANK4Q5T7N3 995 aaPredicted RBP34.51■■■■□ 3.12
CNTFR-201ENST00000351266 WDR62O43379 1518 aa34.48■■■■□ 3.11
CNTFR-201ENST00000351266 TIAM1Q13009 1591 aa34.47■■■■□ 3.11
CNTFR-201ENST00000351266 HNRNPUL2Q1KMD3 747 aaKnown RBP34.43■■■■□ 3.1
CNTFR-201ENST00000351266 IFT140Q96RY7 1462 aa34.42■■■■□ 3.1
CNTFR-201ENST00000351266 RRBP1Q9P2E9 1410 aaKnown RBP34.42■■■■□ 3.1
CNTFR-201ENST00000351266 PBRM1Q86U86 1689 aa34.41■■■■□ 3.1
CNTFR-201ENST00000351266 AQRO60306 1485 aaKnown RBP eCLIP34.4■■■■□ 3.1
CNTFR-201ENST00000351266 FYCO1Q9BQS8 1478 aa34.36■■■■□ 3.09
CNTFR-201ENST00000351266 FHOD3Q2V2M9 1422 aa34.35■■■■□ 3.09
CNTFR-201ENST00000351266 PCF11O94913 1555 aaKnown RBP34.35■■■■□ 3.09
CNTFR-201ENST00000351266 FMN1Q68DA7 1419 aa34.34■■■■□ 3.09
CNTFR-201ENST00000351266 GRIN2BQ13224 1484 aa34.34■■■■□ 3.09
CNTFR-201ENST00000351266 CFAP43Q8NDM7 1665 aa34.33■■■■□ 3.09
CNTFR-201ENST00000351266 CASKIN1Q8WXD9 1431 aa34.32■■■■□ 3.09
CNTFR-201ENST00000351266 SAMD9Q5K651 1589 aa34.32■■■■□ 3.08
CNTFR-201ENST00000351266 LRRC9Q6ZRR7 1453 aa34.31■■■■□ 3.08
CNTFR-201ENST00000351266 P3H3Q8IVL6 736 aa34.3■■■■□ 3.08
CNTFR-201ENST00000351266 ADAMTS12P58397 1594 aa34.29■■■■□ 3.08
CNTFR-201ENST00000351266 ERCC6Q03468 1493 aa34.29■■■■□ 3.08
CNTFR-201ENST00000351266 CCNB3Q8WWL7 1395 aa34.26■■■■□ 3.07
CNTFR-201ENST00000351266 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
CNTFR-201ENST00000351266 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
CNTFR-201ENST00000351266 ZNF608Q9ULD9 1512 aaPredicted RBP34.13■■■■□ 3.05
CNTFR-201ENST00000351266 IQGAP2Q13576 1575 aa34.11■■■■□ 3.05
CNTFR-201ENST00000351266 ATP1B4Q9UN42 357 aaPredicted RBP34.1■■■■□ 3.05
CNTFR-201ENST00000351266 EIF4G3O43432 1585 aaKnown RBP34.05■■■■□ 3.04
CNTFR-201ENST00000351266 CLSPNQ9HAW4 1339 aa34.04■■■■□ 3.04
CNTFR-201ENST00000351266 PHLDB1Q86UU1 1377 aa34.01■■■■□ 3.04
CNTFR-201ENST00000351266 UGGT2Q9NYU1 1516 aa33.96■■■■□ 3.03
CNTFR-201ENST00000351266 MAGI1Q96QZ7 1491 aaPredicted RBP33.96■■■■□ 3.03
CNTFR-201ENST00000351266 KIAA0586Q9BVV6 1533 aa33.93■■■■□ 3.02
CNTFR-201ENST00000351266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.93■■■■□ 3.02
CNTFR-201ENST00000351266 GRIN2AQ12879 1464 aa33.92■■■■□ 3.02
CNTFR-201ENST00000351266 CCDC18Q5T9S5 1454 aa33.91■■■■□ 3.02
CNTFR-201ENST00000351266 MTUS2Q5JR59 1369 aa33.9■■■■□ 3.02
CNTFR-201ENST00000351266 DHX57Q6P158 1386 aaKnown RBP33.88■■■■□ 3.01
CNTFR-201ENST00000351266 HECW1Q76N89 1606 aa33.86■■■■□ 3.01
CNTFR-201ENST00000351266 EHBP1L1Q8N3D4 1523 aa33.83■■■■□ 3.01
CNTFR-201ENST00000351266 LRRIQ1Q96JM4 1722 aa33.83■■■■□ 3.01
CNTFR-201ENST00000351266 SYNJ2O15056 1496 aa33.82■■■■□ 3
CNTFR-201ENST00000351266 ITGAEP38570 1179 aa33.8■■■■□ 3
CNTFR-201ENST00000351266 FAM50AQ14320 339 aaKnown RBP33.79■■■■□ 3
CNTFR-201ENST00000351266 SUPT6HQ7KZ85 1726 aaKnown RBP33.76■■■□□ 2.99
CNTFR-201ENST00000351266 FGD6Q6ZV73 1430 aa33.75■■■□□ 2.99
CNTFR-201ENST00000351266 SETD5Q9C0A6 1442 aa33.74■■■□□ 2.99
CNTFR-201ENST00000351266 KIAA0556O60303 1618 aa33.74■■■□□ 2.99
CNTFR-201ENST00000351266 CHMP7Q8WUX9 453 aaPredicted RBP33.73■■■□□ 2.99
CNTFR-201ENST00000351266 NCOA2Q15596 1464 aa33.72■■■□□ 2.99
CNTFR-201ENST00000351266 RAB3GAP2Q9H2M9 1393 aa33.71■■■□□ 2.99
CNTFR-201ENST00000351266 DISP1Q96F81 1524 aa33.7■■■□□ 2.98
CNTFR-201ENST00000351266 EPRSP07814 1512 aaKnown RBP33.69■■■□□ 2.98
CNTFR-201ENST00000351266 MYOM3Q5VTT5 1437 aa33.67■■■□□ 2.98
CNTFR-201ENST00000351266 ARHGEF11O15085 1522 aa33.64■■■□□ 2.98
CNTFR-201ENST00000351266 CEP170Q5SW79 1584 aa33.63■■■□□ 2.97
CNTFR-201ENST00000351266 ZNF316A6NFI3 1004 aaPredicted RBP33.63■■■□□ 2.97
CNTFR-201ENST00000351266 NUP160Q12769 1436 aa33.62■■■□□ 2.97
CNTFR-201ENST00000351266 MAGI3Q5TCQ9 1506 aa33.59■■■□□ 2.97
CNTFR-201ENST00000351266 DIEXFQ68CQ4 756 aaKnown RBP33.53■■■□□ 2.96
CNTFR-201ENST00000351266 RAPGEF6Q8TEU7 1601 aa33.52■■■□□ 2.96
CNTFR-201ENST00000351266 CARMIL2Q6F5E8 1435 aa33.52■■■□□ 2.96
CNTFR-201ENST00000351266 FBLN2P98095 1184 aa33.52■■■□□ 2.96
CNTFR-201ENST00000351266 CDK13Q14004 1512 aaKnown RBP33.51■■■□□ 2.95
CNTFR-201ENST00000351266 PTPN23Q9H3S7 1636 aa33.48■■■□□ 2.95
CNTFR-201ENST00000351266 TCOF1Q13428 1488 aaKnown RBP33.46■■■□□ 2.95
CNTFR-201ENST00000351266 MIA2Q96PC5 1412 aa33.45■■■□□ 2.95
CNTFR-201ENST00000351266 NUP153P49790 1475 aaKnown RBP33.45■■■□□ 2.95
CNTFR-201ENST00000351266 JPH4Q96JJ6 628 aa33.43■■■□□ 2.94
CNTFR-201ENST00000351266 CDK11AQ9UQ88 783 aaPredicted RBP33.43■■■□□ 2.94
CNTFR-201ENST00000351266 MAPKBP1O60336 1514 aa33.42■■■□□ 2.94
CNTFR-201ENST00000351266 HFM1A2PYH4 1435 aa33.41■■■□□ 2.94
CNTFR-201ENST00000351266 PTPRKQ15262 1439 aa33.34■■■□□ 2.93
CNTFR-201ENST00000351266 AKNAQ7Z591 1439 aa33.27■■■□□ 2.92
CNTFR-201ENST00000351266 NAIPQ13075 1403 aa33.26■■■□□ 2.92
CNTFR-201ENST00000351266 ARID3CA6NKF2 412 aa33.26■■■□□ 2.92
CNTFR-201ENST00000351266 PLB1Q6P1J6 1458 aa33.26■■■□□ 2.91
CNTFR-201ENST00000351266 TROQ12816 1431 aaPredicted RBP33.25■■■□□ 2.91
CNTFR-201ENST00000351266 TIMELESSQ9UNS1 1208 aa33.24■■■□□ 2.91
CNTFR-201ENST00000351266 UACAQ9BZF9 1416 aa33.23■■■□□ 2.91
CNTFR-201ENST00000351266 ABCA8O94911 1581 aa33.19■■■□□ 2.9
CNTFR-201ENST00000351266 GCC2Q8IWJ2 1684 aa33.16■■■□□ 2.9
CNTFR-201ENST00000351266 ADCY10Q96PN6 1610 aa33.16■■■□□ 2.9
CNTFR-201ENST00000351266 ACIN1Q9UKV3 1341 aaKnown RBP33.14■■■□□ 2.9
CNTFR-201ENST00000351266 CHD1O14646 1710 aa33.14■■■□□ 2.9
CNTFR-201ENST00000351266 PRG4Q92954 1404 aaPredicted RBP33.12■■■□□ 2.89
CNTFR-201ENST00000351266 ITSN2Q9NZM3 1697 aa33.11■■■□□ 2.89
CNTFR-201ENST00000351266 ROCK1Q13464 1354 aa33.07■■■□□ 2.88
CNTFR-201ENST00000351266 DNMT1P26358 1616 aaKnown RBP33.07■■■□□ 2.88
CNTFR-201ENST00000351266 DAPK1P53355 1430 aa33.06■■■□□ 2.88
CNTFR-201ENST00000351266 PTPRGP23470 1445 aa33.04■■■□□ 2.88
CNTFR-201ENST00000351266 SHROOM2Q13796 1616 aa33.03■■■□□ 2.88
CNTFR-201ENST00000351266 SIN3AQ96ST3 1273 aa33.02■■■□□ 2.88
CNTFR-201ENST00000351266 PLEKHD1A6NEE1 506 aa33.02■■■□□ 2.88
CNTFR-201ENST00000351266 RRP7BPQ9NSQ0 103 aa33.01■■■□□ 2.88
CNTFR-201ENST00000351266 CHIC2Q9UKJ5 165 aa33.01■■■□□ 2.88
CNTFR-201ENST00000351266 ATP10BO94823 1461 aa33.01■■■□□ 2.87
CNTFR-201ENST00000351266 NEUROD1Q13562 356 aa33■■■□□ 2.87
CNTFR-201ENST00000351266 GPATCH8Q9UKJ3 1502 aaKnown RBP32.99■■■□□ 2.87
CNTFR-201ENST00000351266 ABCC5O15440 1437 aa32.99■■■□□ 2.87
CNTFR-201ENST00000351266 KIF14Q15058 1648 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms