RNA–Protein interactions for RNA: ENST00000348721.3

CISH-201, Transcript of cytokine inducible SH2 containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CISH, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-201ENST00000348721 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
CISH-201ENST00000348721 EFCAB5A4FU69 1503 aa24.37■■□□□ 1.49
CISH-201ENST00000348721 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
CISH-201ENST00000348721 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
CISH-201ENST00000348721 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.481e-8■■■■■ 45.6
CISH-201ENST00000348721 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
CISH-201ENST00000348721 HNRNPUL2Q1KMD3 747 aaKnown RBP24.28■■□□□ 1.48
CISH-201ENST00000348721 P3H3Q8IVL6 736 aa24.28■■□□□ 1.48
CISH-201ENST00000348721 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
CISH-201ENST00000348721 FHOD3Q2V2M9 1422 aa24.27■■□□□ 1.48
CISH-201ENST00000348721 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
CISH-201ENST00000348721 RRBP1Q9P2E9 1410 aaKnown RBP24.26■■□□□ 1.47
CISH-201ENST00000348721 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
CISH-201ENST00000348721 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
CISH-201ENST00000348721 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
CISH-201ENST00000348721 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
CISH-201ENST00000348721 SAMD9Q5K651 1589 aa24.22■■□□□ 1.47
CISH-201ENST00000348721 CASKIN1Q8WXD9 1431 aa24.21■■□□□ 1.47
CISH-201ENST00000348721 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.47
CISH-201ENST00000348721 LRRC9Q6ZRR7 1453 aa24.2■■□□□ 1.46
CISH-201ENST00000348721 FMN1Q68DA7 1419 aa24.2■■□□□ 1.46
CISH-201ENST00000348721 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
CISH-201ENST00000348721 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
CISH-201ENST00000348721 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.45
CISH-201ENST00000348721 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
CISH-201ENST00000348721 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
CISH-201ENST00000348721 MYT1Q01538 1121 aa24.08■■□□□ 1.45
CISH-201ENST00000348721 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
CISH-201ENST00000348721 ATP1B4Q9UN42 357 aaPredicted RBP24.07■■□□□ 1.44
CISH-201ENST00000348721 IQGAP2Q13576 1575 aa24.07■■□□□ 1.44
CISH-201ENST00000348721 PHLDB1Q86UU1 1377 aa24.03■■□□□ 1.44
CISH-201ENST00000348721 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
CISH-201ENST00000348721 KIAA0586Q9BVV6 1533 aa23.99■■□□□ 1.43
CISH-201ENST00000348721 UGGT2Q9NYU1 1516 aa23.99■■□□□ 1.43
CISH-201ENST00000348721 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
CISH-201ENST00000348721 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
CISH-201ENST00000348721 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
CISH-201ENST00000348721 CLSPNQ9HAW4 1339 aa23.9■■□□□ 1.42
CISH-201ENST00000348721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
CISH-201ENST00000348721 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.42
CISH-201ENST00000348721 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
CISH-201ENST00000348721 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
CISH-201ENST00000348721 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
CISH-201ENST00000348721 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
CISH-201ENST00000348721 ITGAEP38570 1179 aa23.85■■□□□ 1.41
CISH-201ENST00000348721 HECW1Q76N89 1606 aa23.83■■□□□ 1.41
CISH-201ENST00000348721 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.4
CISH-201ENST00000348721 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
CISH-201ENST00000348721 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
CISH-201ENST00000348721 CEP170Q5SW79 1584 aa23.8■■□□□ 1.4
CISH-201ENST00000348721 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
CISH-201ENST00000348721 NUP160Q12769 1436 aa23.8■■□□□ 1.4
CISH-201ENST00000348721 EPRSP07814 1512 aaKnown RBP23.79■■□□□ 1.4
CISH-201ENST00000348721 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
CISH-201ENST00000348721 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
CISH-201ENST00000348721 SETD5Q9C0A6 1442 aa23.77■■□□□ 1.4
CISH-201ENST00000348721 MAGI3Q5TCQ9 1506 aa23.76■■□□□ 1.39
CISH-201ENST00000348721 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
CISH-201ENST00000348721 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
CISH-201ENST00000348721 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
CISH-201ENST00000348721 FBLN2P98095 1184 aa23.75■■□□□ 1.39
CISH-201ENST00000348721 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
CISH-201ENST00000348721 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
CISH-201ENST00000348721 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
CISH-201ENST00000348721 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
CISH-201ENST00000348721 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
CISH-201ENST00000348721 CARMIL2Q6F5E8 1435 aa23.65■■□□□ 1.38
CISH-201ENST00000348721 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
CISH-201ENST00000348721 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
CISH-201ENST00000348721 TCOF1Q13428 1488 aaKnown RBP23.6■■□□□ 1.37
CISH-201ENST00000348721 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
CISH-201ENST00000348721 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
CISH-201ENST00000348721 MIA2Q96PC5 1412 aa23.58■■□□□ 1.36
CISH-201ENST00000348721 ARID3CA6NKF2 412 aa23.57■■□□□ 1.36
CISH-201ENST00000348721 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
CISH-201ENST00000348721 NEUROD1Q13562 356 aa23.56■■□□□ 1.36
CISH-201ENST00000348721 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
CISH-201ENST00000348721 HFM1A2PYH4 1435 aa23.55■■□□□ 1.36
CISH-201ENST00000348721 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
CISH-201ENST00000348721 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
CISH-201ENST00000348721 NAIPQ13075 1403 aa23.47■■□□□ 1.35
CISH-201ENST00000348721 TROQ12816 1431 aaPredicted RBP23.47■■□□□ 1.35
CISH-201ENST00000348721 ABCA8O94911 1581 aa23.46■■□□□ 1.35
CISH-201ENST00000348721 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.35
CISH-201ENST00000348721 CHD1O14646 1710 aa23.45■■□□□ 1.34
CISH-201ENST00000348721 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
CISH-201ENST00000348721 AKNAQ7Z591 1439 aa23.41■■□□□ 1.34
CISH-201ENST00000348721 UACAQ9BZF9 1416 aa23.4■■□□□ 1.34
CISH-201ENST00000348721 PTPRGP23470 1445 aa23.38■■□□□ 1.33
CISH-201ENST00000348721 ADCY10Q96PN6 1610 aa23.38■■□□□ 1.33
CISH-201ENST00000348721 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
CISH-201ENST00000348721 ATP10BO94823 1461 aa23.37■■□□□ 1.33
CISH-201ENST00000348721 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
CISH-201ENST00000348721 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
CISH-201ENST00000348721 RRP7BPQ9NSQ0 103 aa23.33■■□□□ 1.33
CISH-201ENST00000348721 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.33
CISH-201ENST00000348721 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.32
CISH-201ENST00000348721 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.32
CISH-201ENST00000348721 GPATCH8Q9UKJ3 1502 aaKnown RBP23.32■■□□□ 1.32
CISH-201ENST00000348721 DAPK1P53355 1430 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms