RNA–Protein interactions for RNA: ENST00000348721.3

CISH-201, Transcript of cytokine inducible SH2 containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CISH, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-201ENST00000348721 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
CISH-201ENST00000348721 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
CISH-201ENST00000348721 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
CISH-201ENST00000348721 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
CISH-201ENST00000348721 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
CISH-201ENST00000348721 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
CISH-201ENST00000348721 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
CISH-201ENST00000348721 ABCC9O60706 1549 aa28.39■■■□□ 2.14
CISH-201ENST00000348721 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
CISH-201ENST00000348721 NACADO15069 1562 aa28.24■■■□□ 2.11
CISH-201ENST00000348721 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
CISH-201ENST00000348721 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
CISH-201ENST00000348721 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
CISH-201ENST00000348721 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
CISH-201ENST00000348721 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
CISH-201ENST00000348721 UNC13AQ9UPW8 1703 aa27.32■■□□□ 1.96
CISH-201ENST00000348721 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
CISH-201ENST00000348721 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CISH-201ENST00000348721 BICRAQ9NZM4 1560 aa27.07■■□□□ 1.92
CISH-201ENST00000348721 WIZO95785 1651 aa27.02■■□□□ 1.92
CISH-201ENST00000348721 PABPN1Q86U42 306 aaKnown RBP eCLIP26.94■■□□□ 1.9
CISH-201ENST00000348721 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
CISH-201ENST00000348721 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
CISH-201ENST00000348721 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
CISH-201ENST00000348721 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
CISH-201ENST00000348721 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
CISH-201ENST00000348721 SMARCA2P51531 1590 aa26.51■■□□□ 1.84
CISH-201ENST00000348721 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
CISH-201ENST00000348721 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
CISH-201ENST00000348721 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
CISH-201ENST00000348721 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
CISH-201ENST00000348721 NCAPD3P42695 1498 aa26.12■■□□□ 1.77
CISH-201ENST00000348721 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
CISH-201ENST00000348721 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
CISH-201ENST00000348721 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
CISH-201ENST00000348721 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.73
CISH-201ENST00000348721 HRCP23327 699 aa25.83■■□□□ 1.73
CISH-201ENST00000348721 SOGA1O94964 1423 aa25.76■■□□□ 1.71
CISH-201ENST00000348721 EEA1Q15075 1411 aa25.76■■□□□ 1.71
CISH-201ENST00000348721 SYNJ1O43426 1573 aa25.74■■□□□ 1.71
CISH-201ENST00000348721 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.7
CISH-201ENST00000348721 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
CISH-201ENST00000348721 CFTRP13569 1480 aa25.67■■□□□ 1.7
CISH-201ENST00000348721 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.7
CISH-201ENST00000348721 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.69
CISH-201ENST00000348721 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
CISH-201ENST00000348721 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
CISH-201ENST00000348721 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
CISH-201ENST00000348721 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
CISH-201ENST00000348721 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
CISH-201ENST00000348721 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
CISH-201ENST00000348721 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
CISH-201ENST00000348721 CUX1P39880 1505 aa25.43■■□□□ 1.66
CISH-201ENST00000348721 GOLGA3Q08378 1498 aa25.42■■□□□ 1.66
CISH-201ENST00000348721 CEP164Q9UPV0 1460 aa25.37■■□□□ 1.65
CISH-201ENST00000348721 KIF21BO75037 1637 aa25.37■■□□□ 1.65
CISH-201ENST00000348721 CEP162Q5TB80 1403 aa25.36■■□□□ 1.65
CISH-201ENST00000348721 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
CISH-201ENST00000348721 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
CISH-201ENST00000348721 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
CISH-201ENST00000348721 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
CISH-201ENST00000348721 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
CISH-201ENST00000348721 ERICH3Q5RHP9 1530 aa25.12■■□□□ 1.61
CISH-201ENST00000348721 NESP48681 1621 aa25.1■■□□□ 1.61
CISH-201ENST00000348721 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
CISH-201ENST00000348721 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
CISH-201ENST00000348721 CLIP1P30622 1438 aa25.05■■□□□ 1.6
CISH-201ENST00000348721 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
CISH-201ENST00000348721 DNAJC5BQ9UF47 199 aa25.02■■□□□ 1.6
CISH-201ENST00000348721 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
CISH-201ENST00000348721 CUX2O14529 1486 aa25.01■■□□□ 1.59
CISH-201ENST00000348721 IGF1RP08069 1367 aa24.97■■□□□ 1.59
CISH-201ENST00000348721 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
CISH-201ENST00000348721 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
CISH-201ENST00000348721 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
CISH-201ENST00000348721 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
CISH-201ENST00000348721 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
CISH-201ENST00000348721 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
CISH-201ENST00000348721 URB2Q14146 1524 aaKnown RBP24.85■■□□□ 1.57
CISH-201ENST00000348721 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
CISH-201ENST00000348721 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
CISH-201ENST00000348721 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
CISH-201ENST00000348721 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
CISH-201ENST00000348721 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
CISH-201ENST00000348721 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
CISH-201ENST00000348721 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
CISH-201ENST00000348721 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
CISH-201ENST00000348721 APLP2Q06481 763 aa24.67■■□□□ 1.54
CISH-201ENST00000348721 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
CISH-201ENST00000348721 CUL7Q14999 1698 aa24.61■■□□□ 1.53
CISH-201ENST00000348721 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
CISH-201ENST00000348721 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
CISH-201ENST00000348721 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
CISH-201ENST00000348721 MRC2Q9UBG0 1479 aa24.55■■□□□ 1.52
CISH-201ENST00000348721 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
CISH-201ENST00000348721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
CISH-201ENST00000348721 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
CISH-201ENST00000348721 WDR62O43379 1518 aa24.39■■□□□ 1.5
CISH-201ENST00000348721 CCER1Q8TC90 406 aaPredicted RBP24.39■■□□□ 1.49
CISH-201ENST00000348721 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms