RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.1
ATRIP-202ENST00000346691 FHOD3Q2V2M9 1422 aa28.19■■■□□ 2.1
ATRIP-202ENST00000346691 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
ATRIP-202ENST00000346691 PCF11O94913 1555 aaKnown RBP28.13■■■□□ 2.09
ATRIP-202ENST00000346691 WDR62O43379 1518 aa28.11■■■□□ 2.09
ATRIP-202ENST00000346691 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
ATRIP-202ENST00000346691 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
ATRIP-202ENST00000346691 EFCAB5A4FU69 1503 aa28.07■■■□□ 2.08
ATRIP-202ENST00000346691 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
ATRIP-202ENST00000346691 ATP1B4Q9UN42 357 aaPredicted RBP28.06■■■□□ 2.08
ATRIP-202ENST00000346691 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
ATRIP-202ENST00000346691 ADAMTS12P58397 1594 aa28■■■□□ 2.07
ATRIP-202ENST00000346691 IFT140Q96RY7 1462 aa28■■■□□ 2.07
ATRIP-202ENST00000346691 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
ATRIP-202ENST00000346691 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
ATRIP-202ENST00000346691 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
ATRIP-202ENST00000346691 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
ATRIP-202ENST00000346691 SAMD9Q5K651 1589 aa27.97■■■□□ 2.07
ATRIP-202ENST00000346691 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
ATRIP-202ENST00000346691 THOC2Q8NI27 1593 aaKnown RBP27.97■■■□□ 2.07
ATRIP-202ENST00000346691 FYCO1Q9BQS8 1478 aa27.93■■■□□ 2.06
ATRIP-202ENST00000346691 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
ATRIP-202ENST00000346691 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
ATRIP-202ENST00000346691 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
ATRIP-202ENST00000346691 EIF4G3O43432 1585 aaKnown RBP27.89■■■□□ 2.06
ATRIP-202ENST00000346691 PHLDB1Q86UU1 1377 aa27.87■■■□□ 2.05
ATRIP-202ENST00000346691 FMN1Q68DA7 1419 aa27.87■■■□□ 2.05
ATRIP-202ENST00000346691 ITGAEP38570 1179 aa27.86■■■□□ 2.05
ATRIP-202ENST00000346691 LRRIQ1Q96JM4 1722 aa27.84■■■□□ 2.05
ATRIP-202ENST00000346691 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
ATRIP-202ENST00000346691 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
ATRIP-202ENST00000346691 FAM50AQ14320 339 aaKnown RBP27.69■■■□□ 2.02
ATRIP-202ENST00000346691 DHX57Q6P158 1386 aaKnown RBP27.68■■■□□ 2.02
ATRIP-202ENST00000346691 MTUS2Q5JR59 1369 aa27.64■■■□□ 2.02
ATRIP-202ENST00000346691 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.01
ATRIP-202ENST00000346691 KIAA0586Q9BVV6 1533 aa27.62■■■□□ 2.01
ATRIP-202ENST00000346691 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
ATRIP-202ENST00000346691 FBLN2P98095 1184 aa27.6■■■□□ 2.01
ATRIP-202ENST00000346691 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
ATRIP-202ENST00000346691 ARID3CA6NKF2 412 aa27.59■■■□□ 2.01
ATRIP-202ENST00000346691 CHMP7Q8WUX9 453 aaPredicted RBP27.58■■■□□ 2.01
ATRIP-202ENST00000346691 DISP1Q96F81 1524 aa27.58■■■□□ 2.01
ATRIP-202ENST00000346691 CEP170Q5SW79 1584 aa27.57■■■□□ 2
ATRIP-202ENST00000346691 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
ATRIP-202ENST00000346691 SYNJ2O15056 1496 aa27.56■■■□□ 2
ATRIP-202ENST00000346691 RAB3GAP2Q9H2M9 1393 aa27.56■■■□□ 2
ATRIP-202ENST00000346691 KIAA0556O60303 1618 aa27.55■■■□□ 2
ATRIP-202ENST00000346691 HECW1Q76N89 1606 aa27.55■■■□□ 2
ATRIP-202ENST00000346691 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
ATRIP-202ENST00000346691 NCOA2Q15596 1464 aa27.53■■■□□ 2
ATRIP-202ENST00000346691 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
ATRIP-202ENST00000346691 EHBP1L1Q8N3D4 1523 aa27.5■■□□□ 1.99
ATRIP-202ENST00000346691 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
ATRIP-202ENST00000346691 SUPT6HQ7KZ85 1726 aaKnown RBP27.49■■□□□ 1.99
ATRIP-202ENST00000346691 CCDC18Q5T9S5 1454 aa27.49■■□□□ 1.99
ATRIP-202ENST00000346691 SETD5Q9C0A6 1442 aa27.47■■□□□ 1.99
ATRIP-202ENST00000346691 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
ATRIP-202ENST00000346691 MYOM3Q5VTT5 1437 aa27.43■■□□□ 1.98
ATRIP-202ENST00000346691 CLSPNQ9HAW4 1339 aa27.42■■□□□ 1.98
ATRIP-202ENST00000346691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.41■■□□□ 1.98
ATRIP-202ENST00000346691 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
ATRIP-202ENST00000346691 NUP160Q12769 1436 aa27.4■■□□□ 1.98
ATRIP-202ENST00000346691 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
ATRIP-202ENST00000346691 ZNF316A6NFI3 1004 aaPredicted RBP27.38■■□□□ 1.97
ATRIP-202ENST00000346691 NUP153P49790 1475 aaKnown RBP27.36■■□□□ 1.97
ATRIP-202ENST00000346691 RAPGEF6Q8TEU7 1601 aa27.36■■□□□ 1.97
ATRIP-202ENST00000346691 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
ATRIP-202ENST00000346691 MAPKBP1O60336 1514 aa27.35■■□□□ 1.97
ATRIP-202ENST00000346691 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
ATRIP-202ENST00000346691 JPH4Q96JJ6 628 aa27.33■■□□□ 1.97
ATRIP-202ENST00000346691 PLB1Q6P1J6 1458 aa27.3■■□□□ 1.96
ATRIP-202ENST00000346691 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
ATRIP-202ENST00000346691 CHD1O14646 1710 aa27.22■■□□□ 1.95
ATRIP-202ENST00000346691 TCOF1Q13428 1488 aaKnown RBP27.2■■□□□ 1.95
ATRIP-202ENST00000346691 HFM1A2PYH4 1435 aa27.18■■□□□ 1.94
ATRIP-202ENST00000346691 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
ATRIP-202ENST00000346691 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
ATRIP-202ENST00000346691 SIN3AQ96ST3 1273 aa27.17■■□□□ 1.94
ATRIP-202ENST00000346691 NAIPQ13075 1403 aa27.16■■□□□ 1.94
ATRIP-202ENST00000346691 RRP7BPQ9NSQ0 103 aa27.12■■□□□ 1.93
ATRIP-202ENST00000346691 MIA2Q96PC5 1412 aa27.11■■□□□ 1.93
ATRIP-202ENST00000346691 NEUROD1Q13562 356 aa27.11■■□□□ 1.93
ATRIP-202ENST00000346691 ZNF644Q9H582 1327 aaPredicted RBP27.09■■□□□ 1.93
ATRIP-202ENST00000346691 CDK11AQ9UQ88 783 aaPredicted RBP27.09■■□□□ 1.93
ATRIP-202ENST00000346691 ABCA8O94911 1581 aa27.08■■□□□ 1.93
ATRIP-202ENST00000346691 KIF14Q15058 1648 aa27.08■■□□□ 1.93
ATRIP-202ENST00000346691 TROQ12816 1431 aaPredicted RBP27.08■■□□□ 1.93
ATRIP-202ENST00000346691 KDM6BO15054 1643 aa27.04■■□□□ 1.92
ATRIP-202ENST00000346691 UACAQ9BZF9 1416 aa27.02■■□□□ 1.92
ATRIP-202ENST00000346691 GCC2Q8IWJ2 1684 aa27.01■■□□□ 1.91
ATRIP-202ENST00000346691 ATP10BO94823 1461 aa27■■□□□ 1.91
ATRIP-202ENST00000346691 ACIN1Q9UKV3 1341 aaKnown RBP26.99■■□□□ 1.91
ATRIP-202ENST00000346691 ADCY10Q96PN6 1610 aa26.97■■□□□ 1.91
ATRIP-202ENST00000346691 PTPRGP23470 1445 aa26.97■■□□□ 1.91
ATRIP-202ENST00000346691 DAPK1P53355 1430 aa26.97■■□□□ 1.91
ATRIP-202ENST00000346691 ERCC6L2Q5T890 1561 aa26.96■■□□□ 1.91
ATRIP-202ENST00000346691 ABCC5O15440 1437 aa26.95■■□□□ 1.91
ATRIP-202ENST00000346691 DNMT1P26358 1616 aaKnown RBP26.95■■□□□ 1.9
ATRIP-202ENST00000346691 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.9
ATRIP-202ENST00000346691 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms