RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 MAGI1Q96QZ7 1491 aaPredicted RBP33.65■■■□□ 2.98
TSPAN3-202ENST00000346495 EFCAB5A4FU69 1503 aa33.55■■■□□ 2.96
TSPAN3-202ENST00000346495 TRIM26Q12899 539 aaPredicted RBP33.53■■■□□ 2.96
TSPAN3-202ENST00000346495 SYNJ2O15056 1496 aa33.51■■■□□ 2.96
TSPAN3-202ENST00000346495 GRIN2AQ12879 1464 aa33.5■■■□□ 2.95
TSPAN3-202ENST00000346495 PCGF6Q9BYE7 350 aa33.46■■■□□ 2.95
TSPAN3-202ENST00000346495 IQGAP2Q13576 1575 aa33.44■■■□□ 2.94
TSPAN3-202ENST00000346495 PPARGC1BQ86YN6 1023 aaKnown RBP33.42■■■□□ 2.94
TSPAN3-202ENST00000346495 SAMD9Q5K651 1589 aa33.41■■■□□ 2.94
TSPAN3-202ENST00000346495 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
TSPAN3-202ENST00000346495 APLP2Q06481 763 aa33.39■■■□□ 2.93
TSPAN3-202ENST00000346495 KIAA0586Q9BVV6 1533 aa33.36■■■□□ 2.93
TSPAN3-202ENST00000346495 FHOD3Q2V2M9 1422 aa33.33■■■□□ 2.93
TSPAN3-202ENST00000346495 P3H3Q8IVL6 736 aa33.31■■■□□ 2.92
TSPAN3-202ENST00000346495 CEP170Q5SW79 1584 aa33.29■■■□□ 2.92
TSPAN3-202ENST00000346495 UGGT2Q9NYU1 1516 aa33.28■■■□□ 2.92
TSPAN3-202ENST00000346495 FBLN2P98095 1184 aa33.28■■■□□ 2.92
TSPAN3-202ENST00000346495 NUP160Q12769 1436 aa33.26■■■□□ 2.92
TSPAN3-202ENST00000346495 FMN1Q68DA7 1419 aa33.23■■■□□ 2.91
TSPAN3-202ENST00000346495 PCF11O94913 1555 aaKnown RBP33.2■■■□□ 2.91
TSPAN3-202ENST00000346495 MAP3K1Q13233 1512 aa33.17■■■□□ 2.9
TSPAN3-202ENST00000346495 CHD1O14646 1710 aa33.17■■■□□ 2.9
TSPAN3-202ENST00000346495 TTBK1Q5TCY1 1321 aaPredicted RBP33.17■■■□□ 2.9
TSPAN3-202ENST00000346495 FYCO1Q9BQS8 1478 aa33.17■■■□□ 2.9
TSPAN3-202ENST00000346495 CASKIN1Q8WXD9 1431 aa33.15■■■□□ 2.9
TSPAN3-202ENST00000346495 TIAM1Q13009 1591 aa33.1■■■□□ 2.89
TSPAN3-202ENST00000346495 KIAA0556O60303 1618 aa33.1■■■□□ 2.89
TSPAN3-202ENST00000346495 DISP1Q96F81 1524 aa33.08■■■□□ 2.89
TSPAN3-202ENST00000346495 CFAP43Q8NDM7 1665 aa33.06■■■□□ 2.88
TSPAN3-202ENST00000346495 KANK4Q5T7N3 995 aaPredicted RBP33.01■■■□□ 2.87
TSPAN3-202ENST00000346495 JPH4Q96JJ6 628 aa32.99■■■□□ 2.87
TSPAN3-202ENST00000346495 ATP1B4Q9UN42 357 aaPredicted RBP32.98■■■□□ 2.87
TSPAN3-202ENST00000346495 CARMIL2Q6F5E8 1435 aa32.95■■■□□ 2.87
TSPAN3-202ENST00000346495 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
TSPAN3-202ENST00000346495 HECW1Q76N89 1606 aa32.91■■■□□ 2.86
TSPAN3-202ENST00000346495 LRRIQ1Q96JM4 1722 aa32.89■■■□□ 2.86
TSPAN3-202ENST00000346495 CCDC18Q5T9S5 1454 aa32.84■■■□□ 2.85
TSPAN3-202ENST00000346495 SHROOM2Q13796 1616 aa32.83■■■□□ 2.85
TSPAN3-202ENST00000346495 RAPGEF6Q8TEU7 1601 aa32.79■■■□□ 2.84
TSPAN3-202ENST00000346495 PRG4Q92954 1404 aaPredicted RBP32.78■■■□□ 2.84
TSPAN3-202ENST00000346495 CLASP1Q7Z460 1538 aa32.77■■■□□ 2.84
TSPAN3-202ENST00000346495 EPRSP07814 1512 aaKnown RBP32.74■■■□□ 2.83
TSPAN3-202ENST00000346495 RRBP1Q9P2E9 1410 aaKnown RBP32.7■■■□□ 2.83
TSPAN3-202ENST00000346495 MTUS2Q5JR59 1369 aa32.7■■■□□ 2.82
TSPAN3-202ENST00000346495 EHBP1L1Q8N3D4 1523 aa32.68■■■□□ 2.82
TSPAN3-202ENST00000346495 NUP153P49790 1475 aaKnown RBP32.66■■■□□ 2.82
TSPAN3-202ENST00000346495 CDK13Q14004 1512 aaKnown RBP32.64■■■□□ 2.81
TSPAN3-202ENST00000346495 PLB1Q6P1J6 1458 aa32.63■■■□□ 2.81
TSPAN3-202ENST00000346495 ABCA8O94911 1581 aa32.62■■■□□ 2.81
TSPAN3-202ENST00000346495 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
TSPAN3-202ENST00000346495 PHLDB1Q86UU1 1377 aa32.59■■■□□ 2.81
TSPAN3-202ENST00000346495 PTPRGP23470 1445 aa32.59■■■□□ 2.81
TSPAN3-202ENST00000346495 CCNB3Q8WWL7 1395 aa32.59■■■□□ 2.81
TSPAN3-202ENST00000346495 MAGI3Q5TCQ9 1506 aa32.58■■■□□ 2.81
TSPAN3-202ENST00000346495 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
TSPAN3-202ENST00000346495 NCOA2Q15596 1464 aa32.51■■■□□ 2.8
TSPAN3-202ENST00000346495 HRCP23327 699 aa32.51■■■□□ 2.79
TSPAN3-202ENST00000346495 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
TSPAN3-202ENST00000346495 HNRNPUL2Q1KMD3 747 aaKnown RBP32.48■■■□□ 2.79
TSPAN3-202ENST00000346495 CDK11AQ9UQ88 783 aaPredicted RBP32.48■■■□□ 2.79
TSPAN3-202ENST00000346495 ARHGEF11O15085 1522 aa32.48■■■□□ 2.79
TSPAN3-202ENST00000346495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.43■■■□□ 2.78
TSPAN3-202ENST00000346495 OSCARQ8IYS5 282 aa32.43■■■□□ 2.78
TSPAN3-202ENST00000346495 UACAQ9BZF9 1416 aa32.41■■■□□ 2.78
TSPAN3-202ENST00000346495 MYOM3Q5VTT5 1437 aa32.4■■■□□ 2.78
TSPAN3-202ENST00000346495 FGD6Q6ZV73 1430 aa32.39■■■□□ 2.78
TSPAN3-202ENST00000346495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.39■■■□□ 2.78
TSPAN3-202ENST00000346495 ATP10BO94823 1461 aa32.38■■■□□ 2.77
TSPAN3-202ENST00000346495 TROQ12816 1431 aaPredicted RBP32.36■■■□□ 2.77
TSPAN3-202ENST00000346495 ABCC2Q92887 1545 aa32.33■■■□□ 2.77
TSPAN3-202ENST00000346495 ADCY10Q96PN6 1610 aa32.31■■■□□ 2.76
TSPAN3-202ENST00000346495 FAM50AQ14320 339 aaKnown RBP32.31■■■□□ 2.76
TSPAN3-202ENST00000346495 UHRF1BP1LA0JNW5 1464 aa32.26■■■□□ 2.76
TSPAN3-202ENST00000346495 PLEKHD1A6NEE1 506 aa32.26■■■□□ 2.75
TSPAN3-202ENST00000346495 PTPN23Q9H3S7 1636 aa32.25■■■□□ 2.75
TSPAN3-202ENST00000346495 MIA2Q96PC5 1412 aa32.24■■■□□ 2.75
TSPAN3-202ENST00000346495 ZEB1P37275 1124 aaPredicted RBP32.22■■■□□ 2.75
TSPAN3-202ENST00000346495 ITGAEP38570 1179 aa32.22■■■□□ 2.75
TSPAN3-202ENST00000346495 TCOF1Q13428 1488 aaKnown RBP32.21■■■□□ 2.75
TSPAN3-202ENST00000346495 CCER1Q8TC90 406 aaPredicted RBP32.19■■■□□ 2.74
TSPAN3-202ENST00000346495 KIF14Q15058 1648 aa32.19■■■□□ 2.74
TSPAN3-202ENST00000346495 ITSN2Q9NZM3 1697 aa32.17■■■□□ 2.74
TSPAN3-202ENST00000346495 KDM5BQ9UGL1 1544 aa32.12■■■□□ 2.73
TSPAN3-202ENST00000346495 ZCCHC11Q5TAX3 1644 aaKnown RBP32.12■■■□□ 2.73
TSPAN3-202ENST00000346495 ABCC10Q5T3U5 1492 aa32.07■■■□□ 2.72
TSPAN3-202ENST00000346495 GPATCH8Q9UKJ3 1502 aaKnown RBP32.07■■■□□ 2.72
TSPAN3-202ENST00000346495 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
TSPAN3-202ENST00000346495 SETD5Q9C0A6 1442 aa32.02■■■□□ 2.72
TSPAN3-202ENST00000346495 CFDP1Q9UEE9 299 aaPredicted RBP31.98■■■□□ 2.71
TSPAN3-202ENST00000346495 PTPRKQ15262 1439 aa31.98■■■□□ 2.71
TSPAN3-202ENST00000346495 RAB3GAP2Q9H2M9 1393 aa31.95■■■□□ 2.71
TSPAN3-202ENST00000346495 CAMSAP2Q08AD1 1489 aa31.94■■■□□ 2.7
TSPAN3-202ENST00000346495 DNMT1P26358 1616 aaKnown RBP31.93■■■□□ 2.7
TSPAN3-202ENST00000346495 PREX2Q70Z35 1606 aa31.9■■■□□ 2.7
TSPAN3-202ENST00000346495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.89■■■□□ 2.72e-7■■■■■ 47.7
TSPAN3-202ENST00000346495 HFM1A2PYH4 1435 aa31.89■■■□□ 2.69
TSPAN3-202ENST00000346495 ZNF644Q9H582 1327 aaPredicted RBP31.88■■■□□ 2.69
TSPAN3-202ENST00000346495 DAPK1P53355 1430 aa31.88■■■□□ 2.69
TSPAN3-202ENST00000346495 TTC37Q6PGP7 1564 aa31.87■■■□□ 2.69
TSPAN3-202ENST00000346495 DHX57Q6P158 1386 aaKnown RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms