RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.942e-6■■■□□ 15.8
NPTN-201ENST00000345330 CTTNBP2Q8WZ74 1663 aa20.95■□□□□ 0.94
NPTN-201ENST00000345330 PCF11O94913 1555 aaKnown RBP20.9■□□□□ 0.94
NPTN-201ENST00000345330 TIAM1Q13009 1591 aa20.89■□□□□ 0.94
NPTN-201ENST00000345330 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
NPTN-201ENST00000345330 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
NPTN-201ENST00000345330 WDR62O43379 1518 aa20.86■□□□□ 0.93
NPTN-201ENST00000345330 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
NPTN-201ENST00000345330 EFCAB5A4FU69 1503 aa20.84■□□□□ 0.93
NPTN-201ENST00000345330 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
NPTN-201ENST00000345330 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
NPTN-201ENST00000345330 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
NPTN-201ENST00000345330 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
NPTN-201ENST00000345330 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
NPTN-201ENST00000345330 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
NPTN-201ENST00000345330 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
NPTN-201ENST00000345330 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
NPTN-201ENST00000345330 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
NPTN-201ENST00000345330 CCNB3Q8WWL7 1395 aa20.76■□□□□ 0.91
NPTN-201ENST00000345330 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
NPTN-201ENST00000345330 CASKIN1Q8WXD9 1431 aa20.76■□□□□ 0.91
NPTN-201ENST00000345330 PHLDB1Q86UU1 1377 aa20.76■□□□□ 0.91
NPTN-201ENST00000345330 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
NPTN-201ENST00000345330 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
NPTN-201ENST00000345330 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
NPTN-201ENST00000345330 ITGAEP38570 1179 aa20.72■□□□□ 0.91
NPTN-201ENST00000345330 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
NPTN-201ENST00000345330 LRRIQ1Q96JM4 1722 aa20.69■□□□□ 0.9
NPTN-201ENST00000345330 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
NPTN-201ENST00000345330 IQGAP2Q13576 1575 aa20.65■□□□□ 0.9
NPTN-201ENST00000345330 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
NPTN-201ENST00000345330 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.88
NPTN-201ENST00000345330 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
NPTN-201ENST00000345330 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
NPTN-201ENST00000345330 MTUS2Q5JR59 1369 aa20.54■□□□□ 0.88
NPTN-201ENST00000345330 UGGT2Q9NYU1 1516 aa20.53■□□□□ 0.88
NPTN-201ENST00000345330 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.87
NPTN-201ENST00000345330 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.87
NPTN-201ENST00000345330 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
NPTN-201ENST00000345330 DISP1Q96F81 1524 aa20.51■□□□□ 0.87
NPTN-201ENST00000345330 MAGI1Q96QZ7 1491 aaPredicted RBP20.48■□□□□ 0.87
NPTN-201ENST00000345330 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
NPTN-201ENST00000345330 FBLN2P98095 1184 aa20.48■□□□□ 0.87
NPTN-201ENST00000345330 FGD6Q6ZV73 1430 aa20.47■□□□□ 0.87
NPTN-201ENST00000345330 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
NPTN-201ENST00000345330 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
NPTN-201ENST00000345330 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
NPTN-201ENST00000345330 KIAA0556O60303 1618 aa20.46■□□□□ 0.87
NPTN-201ENST00000345330 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
NPTN-201ENST00000345330 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
NPTN-201ENST00000345330 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
NPTN-201ENST00000345330 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
NPTN-201ENST00000345330 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
NPTN-201ENST00000345330 PTPRKQ15262 1439 aa20.41■□□□□ 0.86
NPTN-201ENST00000345330 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
NPTN-201ENST00000345330 CCDC18Q5T9S5 1454 aa20.4■□□□□ 0.86
NPTN-201ENST00000345330 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
NPTN-201ENST00000345330 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
NPTN-201ENST00000345330 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.86
NPTN-201ENST00000345330 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.86
NPTN-201ENST00000345330 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.85
NPTN-201ENST00000345330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.39■□□□□ 0.85
NPTN-201ENST00000345330 MAPKBP1O60336 1514 aa20.39■□□□□ 0.85
NPTN-201ENST00000345330 NUP160Q12769 1436 aa20.36■□□□□ 0.85
NPTN-201ENST00000345330 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
NPTN-201ENST00000345330 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
NPTN-201ENST00000345330 PTPN23Q9H3S7 1636 aa20.31■□□□□ 0.84
NPTN-201ENST00000345330 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
NPTN-201ENST00000345330 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
NPTN-201ENST00000345330 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
NPTN-201ENST00000345330 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
NPTN-201ENST00000345330 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
NPTN-201ENST00000345330 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
NPTN-201ENST00000345330 NAIPQ13075 1403 aa20.21■□□□□ 0.83
NPTN-201ENST00000345330 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.83
NPTN-201ENST00000345330 CARMIL2Q6F5E8 1435 aa20.19■□□□□ 0.82
NPTN-201ENST00000345330 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
NPTN-201ENST00000345330 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
NPTN-201ENST00000345330 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
NPTN-201ENST00000345330 CHD1O14646 1710 aa20.17■□□□□ 0.82
NPTN-201ENST00000345330 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
NPTN-201ENST00000345330 KDM6BO15054 1643 aa20.14■□□□□ 0.81
NPTN-201ENST00000345330 KIF14Q15058 1648 aa20.12■□□□□ 0.81
NPTN-201ENST00000345330 TROQ12816 1431 aaPredicted RBP20.12■□□□□ 0.81
NPTN-201ENST00000345330 ABCA8O94911 1581 aa20.12■□□□□ 0.81
NPTN-201ENST00000345330 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
NPTN-201ENST00000345330 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
NPTN-201ENST00000345330 MIER1Q8N108 512 aa20.08■□□□□ 0.81
NPTN-201ENST00000345330 ATP10BO94823 1461 aa20.07■□□□□ 0.8
NPTN-201ENST00000345330 GCC2Q8IWJ2 1684 aa20.05■□□□□ 0.8
NPTN-201ENST00000345330 ABCC5O15440 1437 aa20.05■□□□□ 0.8
NPTN-201ENST00000345330 DAPK1P53355 1430 aa20.05■□□□□ 0.8
NPTN-201ENST00000345330 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
NPTN-201ENST00000345330 DENND4BO75064 1496 aaPredicted RBP20.04■□□□□ 0.8
NPTN-201ENST00000345330 GPATCH8Q9UKJ3 1502 aaKnown RBP20.04■□□□□ 0.8
NPTN-201ENST00000345330 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
NPTN-201ENST00000345330 PTPRGP23470 1445 aa20.02■□□□□ 0.8
NPTN-201ENST00000345330 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
NPTN-201ENST00000345330 AKNAQ7Z591 1439 aa20■□□□□ 0.79
NPTN-201ENST00000345330 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms