RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ERCC6L2Q5T890 1561 aa23.32■■□□□ 1.32
TPM4-202ENST00000344824 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
TPM4-202ENST00000344824 PRG4Q92954 1404 aaPredicted RBP23.19■■□□□ 1.3
TPM4-202ENST00000344824 KIAA0586Q9BVV6 1533 aa23.17■■□□□ 1.3
TPM4-202ENST00000344824 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
TPM4-202ENST00000344824 JPH4Q96JJ6 628 aa23.14■■□□□ 1.29
TPM4-202ENST00000344824 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
TPM4-202ENST00000344824 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
TPM4-202ENST00000344824 PRXQ9BXM0 1461 aa23■■□□□ 1.27
TPM4-202ENST00000344824 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
TPM4-202ENST00000344824 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
TPM4-202ENST00000344824 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
TPM4-202ENST00000344824 EEA1Q15075 1411 aa22.98■■□□□ 1.27
TPM4-202ENST00000344824 CARMIL2Q6F5E8 1435 aa22.97■■□□□ 1.27
TPM4-202ENST00000344824 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
TPM4-202ENST00000344824 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
TPM4-202ENST00000344824 KIAA0556O60303 1618 aa22.92■■□□□ 1.26
TPM4-202ENST00000344824 ADCY10Q96PN6 1610 aa22.91■■□□□ 1.26
TPM4-202ENST00000344824 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
TPM4-202ENST00000344824 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
TPM4-202ENST00000344824 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
TPM4-202ENST00000344824 PTPRGP23470 1445 aa22.86■■□□□ 1.25
TPM4-202ENST00000344824 KIF21BO75037 1637 aa22.83■■□□□ 1.25
TPM4-202ENST00000344824 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
TPM4-202ENST00000344824 NPM1P06748 294 aaKnown RBP eCLIP22.8■■□□□ 1.24
TPM4-202ENST00000344824 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
TPM4-202ENST00000344824 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
TPM4-202ENST00000344824 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
TPM4-202ENST00000344824 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
TPM4-202ENST00000344824 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
TPM4-202ENST00000344824 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
TPM4-202ENST00000344824 SAMD9Q5K651 1589 aa22.69■■□□□ 1.22
TPM4-202ENST00000344824 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
TPM4-202ENST00000344824 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
TPM4-202ENST00000344824 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
TPM4-202ENST00000344824 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
TPM4-202ENST00000344824 UHRF1BP1LA0JNW5 1464 aa22.67■■□□□ 1.22
TPM4-202ENST00000344824 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
TPM4-202ENST00000344824 TSPOAP1O95153 1857 aa22.63■■□□□ 1.21
TPM4-202ENST00000344824 ABCC10Q5T3U5 1492 aa22.62■■□□□ 1.21
TPM4-202ENST00000344824 ABCA8O94911 1581 aa22.62■■□□□ 1.21
TPM4-202ENST00000344824 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
TPM4-202ENST00000344824 FAM69CQ0P6D2 419 aa22.59■■□□□ 1.21
TPM4-202ENST00000344824 KDM5BQ9UGL1 1544 aa22.58■■□□□ 1.21
TPM4-202ENST00000344824 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.2
TPM4-202ENST00000344824 ASXL2Q76L83 1435 aa22.58■■□□□ 1.2
TPM4-202ENST00000344824 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
TPM4-202ENST00000344824 RAPGEF6Q8TEU7 1601 aa22.56■■□□□ 1.2
TPM4-202ENST00000344824 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
TPM4-202ENST00000344824 WDR7Q9Y4E6 1490 aa22.45■■□□□ 1.18
TPM4-202ENST00000344824 GLI2P10070 1586 aa22.45■■□□□ 1.18
TPM4-202ENST00000344824 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
TPM4-202ENST00000344824 PPRC1Q5VV67 1664 aaKnown RBP22.41■■□□□ 1.18
TPM4-202ENST00000344824 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
TPM4-202ENST00000344824 ARHGAP35Q9NRY4 1499 aa22.41■■□□□ 1.18
TPM4-202ENST00000344824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.4■■□□□ 1.18
TPM4-202ENST00000344824 HNRNPUL2Q1KMD3 747 aaKnown RBP22.4■■□□□ 1.18
TPM4-202ENST00000344824 KDM6BO15054 1643 aa22.39■■□□□ 1.17
TPM4-202ENST00000344824 ATP10BO94823 1461 aa22.38■■□□□ 1.17
TPM4-202ENST00000344824 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
TPM4-202ENST00000344824 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
TPM4-202ENST00000344824 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
TPM4-202ENST00000344824 HECW1Q76N89 1606 aa22.33■■□□□ 1.17
TPM4-202ENST00000344824 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
TPM4-202ENST00000344824 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
TPM4-202ENST00000344824 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
TPM4-202ENST00000344824 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
TPM4-202ENST00000344824 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
TPM4-202ENST00000344824 CLIP1P30622 1438 aa22.26■■□□□ 1.15
TPM4-202ENST00000344824 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
TPM4-202ENST00000344824 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
TPM4-202ENST00000344824 CD109Q6YHK3 1445 aa22.24■■□□□ 1.15
TPM4-202ENST00000344824 LOC105371045A0A1W2PR82 267 aa22.23■■□□□ 1.15
TPM4-202ENST00000344824 MAGI3Q5TCQ9 1506 aa22.17■■□□□ 1.14
TPM4-202ENST00000344824 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
TPM4-202ENST00000344824 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.14
TPM4-202ENST00000344824 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
TPM4-202ENST00000344824 CASKIN1Q8WXD9 1431 aa22.11■■□□□ 1.13
TPM4-202ENST00000344824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.131e-6■■□□□ 14.3
TPM4-202ENST00000344824 FYCO1Q9BQS8 1478 aa22.1■■□□□ 1.13
TPM4-202ENST00000344824 COL17A1Q9UMD9 1497 aaPredicted RBP22.1■■□□□ 1.13
TPM4-202ENST00000344824 KIF14Q15058 1648 aa22.09■■□□□ 1.13
TPM4-202ENST00000344824 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
TPM4-202ENST00000344824 MYO5CQ9NQX4 1742 aa22.08■■□□□ 1.12
TPM4-202ENST00000344824 CFAP74Q9C0B2 1584 aa22.06■■□□□ 1.12
TPM4-202ENST00000344824 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
TPM4-202ENST00000344824 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
TPM4-202ENST00000344824 NEO1Q92859 1461 aa22■■□□□ 1.11
TPM4-202ENST00000344824 FANCAO15360 1455 aa21.99■■□□□ 1.11
TPM4-202ENST00000344824 ARAP3Q8WWN8 1544 aa21.98■■□□□ 1.11
TPM4-202ENST00000344824 FRMPD1Q5SYB0 1578 aa21.93■■□□□ 1.1
TPM4-202ENST00000344824 PHLDB1Q86UU1 1377 aa21.93■■□□□ 1.1
TPM4-202ENST00000344824 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
TPM4-202ENST00000344824 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
TPM4-202ENST00000344824 RICTORQ6R327 1708 aa21.92■■□□□ 1.1
TPM4-202ENST00000344824 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
TPM4-202ENST00000344824 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
TPM4-202ENST00000344824 CDC42BPAQ5VT25 1732 aa21.91■■□□□ 1.1
TPM4-202ENST00000344824 PLCH2O75038 1416 aa21.9■■□□□ 1.1
TPM4-202ENST00000344824 RAPGEF3O95398 923 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms