RNA–Protein interactions for RNA: ENST00000343938.8

CPTP-201, Transcript of ceramide-1-phosphate transfer protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPTP, Length 2,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPTP-201ENST00000343938 MAGI1Q96QZ7 1491 aaPredicted RBP39.12■■■■□ 3.85
CPTP-201ENST00000343938 FBLN2P98095 1184 aa39.07■■■■□ 3.85
CPTP-201ENST00000343938 GRIN2AQ12879 1464 aa39.02■■■■□ 3.84
CPTP-201ENST00000343938 SYNJ2O15056 1496 aa39.01■■■■□ 3.84
CPTP-201ENST00000343938 PPARGC1BQ86YN6 1023 aaKnown RBP39.01■■■■□ 3.83
CPTP-201ENST00000343938 CHMP7Q8WUX9 453 aaPredicted RBP38.99■■■■□ 3.83
CPTP-201ENST00000343938 ARHGAP35Q9NRY4 1499 aa38.93■■■■□ 3.82
CPTP-201ENST00000343938 ARAP1Q96P48 1450 aa38.89■■■■□ 3.82
CPTP-201ENST00000343938 CHD1O14646 1710 aa38.89■■■■□ 3.82
CPTP-201ENST00000343938 CEP170Q5SW79 1584 aa38.87■■■■□ 3.81
CPTP-201ENST00000343938 P3H3Q8IVL6 736 aa38.84■■■■□ 3.81
CPTP-201ENST00000343938 IQGAP2Q13576 1575 aa38.81■■■■□ 3.8
CPTP-201ENST00000343938 VPS8Q8N3P4 1428 aa38.74■■■■□ 3.79
CPTP-201ENST00000343938 FHOD3Q2V2M9 1422 aa38.71■■■■□ 3.79
CPTP-201ENST00000343938 NUP160Q12769 1436 aa38.7■■■■□ 3.79
CPTP-201ENST00000343938 KIAA0586Q9BVV6 1533 aa38.69■■■■□ 3.78
CPTP-201ENST00000343938 SAMD9Q5K651 1589 aa38.66■■■■□ 3.78
CPTP-201ENST00000343938 EFCAB5A4FU69 1503 aa38.64■■■■□ 3.78
CPTP-201ENST00000343938 TTBK1Q5TCY1 1321 aaPredicted RBP38.57■■■■□ 3.76
CPTP-201ENST00000343938 UGGT2Q9NYU1 1516 aa38.54■■■■□ 3.76
CPTP-201ENST00000343938 DISP1Q96F81 1524 aa38.47■■■■□ 3.75
CPTP-201ENST00000343938 PCF11O94913 1555 aaKnown RBP38.44■■■■□ 3.74
CPTP-201ENST00000343938 KIAA0556O60303 1618 aa38.44■■■■□ 3.74
CPTP-201ENST00000343938 JPH4Q96JJ6 628 aa38.43■■■■□ 3.74
CPTP-201ENST00000343938 ZEB1P37275 1124 aaPredicted RBP38.38■■■■□ 3.73
CPTP-201ENST00000343938 APLP2Q06481 763 aa38.38■■■■□ 3.73
CPTP-201ENST00000343938 ATP1B4Q9UN42 357 aaPredicted RBP38.34■■■■□ 3.73
CPTP-201ENST00000343938 FMN1Q68DA7 1419 aa38.3■■■■□ 3.72
CPTP-201ENST00000343938 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
CPTP-201ENST00000343938 PRG4Q92954 1404 aaPredicted RBP38.25■■■■□ 3.71
CPTP-201ENST00000343938 LRRIQ1Q96JM4 1722 aa38.24■■■■□ 3.71
CPTP-201ENST00000343938 SHROOM2Q13796 1616 aa38.24■■■■□ 3.71
CPTP-201ENST00000343938 ERCC6L2Q5T890 1561 aa38.22■■■■□ 3.71
CPTP-201ENST00000343938 CASKIN1Q8WXD9 1431 aa38.22■■■■□ 3.71
CPTP-201ENST00000343938 KANK4Q5T7N3 995 aaPredicted RBP38.21■■■■□ 3.71
CPTP-201ENST00000343938 FYCO1Q9BQS8 1478 aa38.21■■■■□ 3.71
CPTP-201ENST00000343938 CARMIL2Q6F5E8 1435 aa38.18■■■■□ 3.7
CPTP-201ENST00000343938 TIAM1Q13009 1591 aa38.14■■■■□ 3.7
CPTP-201ENST00000343938 ARID3CA6NKF2 412 aa38.12■■■■□ 3.69
CPTP-201ENST00000343938 CFAP43Q8NDM7 1665 aa38.09■■■■□ 3.69
CPTP-201ENST00000343938 PLB1Q6P1J6 1458 aa38.06■■■■□ 3.68
CPTP-201ENST00000343938 OSCARQ8IYS5 282 aa38.04■■■■□ 3.68
CPTP-201ENST00000343938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.04■■■■□ 3.68
CPTP-201ENST00000343938 HECW1Q76N89 1606 aa38.01■■■■□ 3.68
CPTP-201ENST00000343938 RAPGEF6Q8TEU7 1601 aa38.01■■■■□ 3.68
CPTP-201ENST00000343938 CDK13Q14004 1512 aaKnown RBP37.98■■■■□ 3.67
CPTP-201ENST00000343938 MAP3K1Q13233 1512 aa37.96■■■■□ 3.67
CPTP-201ENST00000343938 CCER1Q8TC90 406 aaPredicted RBP37.95■■■■□ 3.67
CPTP-201ENST00000343938 LRRC9Q6ZRR7 1453 aa37.94■■■■□ 3.66
CPTP-201ENST00000343938 NUP153P49790 1475 aaKnown RBP37.94■■■■□ 3.66
CPTP-201ENST00000343938 PTPRGP23470 1445 aa37.92■■■■□ 3.66
CPTP-201ENST00000343938 EPRSP07814 1512 aaKnown RBP37.92■■■■□ 3.66
CPTP-201ENST00000343938 ABCA8O94911 1581 aa37.86■■■■□ 3.65
CPTP-201ENST00000343938 MAGI3Q5TCQ9 1506 aa37.85■■■■□ 3.65
CPTP-201ENST00000343938 CCDC18Q5T9S5 1454 aa37.82■■■■□ 3.65
CPTP-201ENST00000343938 HNRNPUL2Q1KMD3 747 aaKnown RBP37.79■■■■□ 3.64
CPTP-201ENST00000343938 MTUS2Q5JR59 1369 aa37.76■■■■□ 3.64
CPTP-201ENST00000343938 RRBP1Q9P2E9 1410 aaKnown RBP37.71■■■■□ 3.63
CPTP-201ENST00000343938 UACAQ9BZF9 1416 aa37.69■■■■□ 3.62
CPTP-201ENST00000343938 PHLDB1Q86UU1 1377 aa37.67■■■■□ 3.62
CPTP-201ENST00000343938 EHBP1L1Q8N3D4 1523 aa37.66■■■■□ 3.62
CPTP-201ENST00000343938 ATP10BO94823 1461 aa37.63■■■■□ 3.62
CPTP-201ENST00000343938 ABCC2Q92887 1545 aa37.6■■■■□ 3.61
CPTP-201ENST00000343938 SUPT6HQ7KZ85 1726 aaKnown RBP37.59■■■■□ 3.61
CPTP-201ENST00000343938 NCOA2Q15596 1464 aa37.57■■■■□ 3.6
CPTP-201ENST00000343938 CCNB3Q8WWL7 1395 aa37.54■■■■□ 3.6
CPTP-201ENST00000343938 ARHGEF11O15085 1522 aa37.53■■■■□ 3.6
CPTP-201ENST00000343938 ADCY10Q96PN6 1610 aa37.51■■■■□ 3.6
CPTP-201ENST00000343938 KIF14Q15058 1648 aa37.48■■■■□ 3.59
CPTP-201ENST00000343938 ZCCHC11Q5TAX3 1644 aaKnown RBP37.45■■■■□ 3.59
CPTP-201ENST00000343938 CDK11AQ9UQ88 783 aaPredicted RBP37.45■■■■□ 3.59
CPTP-201ENST00000343938 TROQ12816 1431 aaPredicted RBP37.44■■■■□ 3.58
CPTP-201ENST00000343938 UHRF1BP1LA0JNW5 1464 aa37.42■■■■□ 3.58
CPTP-201ENST00000343938 RIMBP3CA6NJZ7 1639 aa37.4■■■■□ 3.58
CPTP-201ENST00000343938 RIMBP3BA6NNM3 1639 aa37.4■■■■□ 3.58
CPTP-201ENST00000343938 RIMBP3Q9UFD9 1639 aa37.4■■■■□ 3.58
CPTP-201ENST00000343938 PLEKHD1A6NEE1 506 aa37.37■■■■□ 3.57
CPTP-201ENST00000343938 KDM5BQ9UGL1 1544 aa37.35■■■■□ 3.57
CPTP-201ENST00000343938 MYOM3Q5VTT5 1437 aa37.35■■■■□ 3.57
CPTP-201ENST00000343938 FGD6Q6ZV73 1430 aa37.34■■■■□ 3.57
CPTP-201ENST00000343938 FAM50AQ14320 339 aaKnown RBP37.34■■■■□ 3.57
CPTP-201ENST00000343938 ITGAEP38570 1179 aa37.33■■■■□ 3.57
CPTP-201ENST00000343938 CYB5RLQ6IPT4 315 aa37.25■■■■□ 3.55
CPTP-201ENST00000343938 PTPN23Q9H3S7 1636 aa37.22■■■■□ 3.55
CPTP-201ENST00000343938 KCNH8Q96L42 1107 aa37.2■■■■□ 3.55
CPTP-201ENST00000343938 CDC42BPAQ5VT25 1732 aa37.18■■■■□ 3.54
CPTP-201ENST00000343938 ABCC10Q5T3U5 1492 aa37.17■■■■□ 3.54
CPTP-201ENST00000343938 TTC37Q6PGP7 1564 aa37.15■■■■□ 3.54
CPTP-201ENST00000343938 GPATCH8Q9UKJ3 1502 aaKnown RBP37.15■■■■□ 3.54
CPTP-201ENST00000343938 DHX57Q6P158 1386 aaKnown RBP37.13■■■■□ 3.53
CPTP-201ENST00000343938 ZNF644Q9H582 1327 aaPredicted RBP37.12■■■■□ 3.53
CPTP-201ENST00000343938 ITSN2Q9NZM3 1697 aa37.11■■■■□ 3.53
CPTP-201ENST00000343938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.1■■■■□ 3.53
CPTP-201ENST00000343938 CLSPNQ9HAW4 1339 aa37.09■■■■□ 3.53
CPTP-201ENST00000343938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.09■■■■□ 3.53
CPTP-201ENST00000343938 ASXL2Q76L83 1435 aa37.06■■■■□ 3.52
CPTP-201ENST00000343938 MIA2Q96PC5 1412 aa37.06■■■■□ 3.52
CPTP-201ENST00000343938 WDR7Q9Y4E6 1490 aa37.05■■■■□ 3.52
CPTP-201ENST00000343938 CFDP1Q9UEE9 299 aaPredicted RBP37.04■■■■□ 3.52
CPTP-201ENST00000343938 ZNF777Q9ULD5 760 aaPredicted RBP37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms