RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 ADAMTS12P58397 1594 aa28.43■■■□□ 2.14
VMAC-201ENST00000339485 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.13
VMAC-201ENST00000339485 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
VMAC-201ENST00000339485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
VMAC-201ENST00000339485 SNAPC4Q5SXM2 1469 aa28.35■■■□□ 2.13
VMAC-201ENST00000339485 CCER1Q8TC90 406 aaPredicted RBP28.31■■■□□ 2.12
VMAC-201ENST00000339485 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
VMAC-201ENST00000339485 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
VMAC-201ENST00000339485 VPS8Q8N3P4 1428 aa28.27■■■□□ 2.12
VMAC-201ENST00000339485 ACIN1Q9UKV3 1341 aaKnown RBP28.26■■■□□ 2.11
VMAC-201ENST00000339485 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
VMAC-201ENST00000339485 NEUROD1Q13562 356 aa28.17■■■□□ 2.1
VMAC-201ENST00000339485 GRIN2AQ12879 1464 aa28.17■■■□□ 2.1
VMAC-201ENST00000339485 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
VMAC-201ENST00000339485 EFCAB5A4FU69 1503 aa28.12■■■□□ 2.09
VMAC-201ENST00000339485 DIEXFQ68CQ4 756 aaKnown RBP28.09■■■□□ 2.09
VMAC-201ENST00000339485 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
VMAC-201ENST00000339485 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
VMAC-201ENST00000339485 FBLN2P98095 1184 aa28.07■■■□□ 2.08
VMAC-201ENST00000339485 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
VMAC-201ENST00000339485 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
VMAC-201ENST00000339485 FHOD3Q2V2M9 1422 aa28.04■■■□□ 2.08
VMAC-201ENST00000339485 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
VMAC-201ENST00000339485 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
VMAC-201ENST00000339485 KIAA0586Q9BVV6 1533 aa27.99■■■□□ 2.07
VMAC-201ENST00000339485 CENPBP07199 599 aaPredicted RBP27.98■■■□□ 2.07
VMAC-201ENST00000339485 APLP2Q06481 763 aa27.97■■■□□ 2.07
VMAC-201ENST00000339485 CHD1O14646 1710 aa27.95■■■□□ 2.06
VMAC-201ENST00000339485 NUP160Q12769 1436 aa27.94■■■□□ 2.06
VMAC-201ENST00000339485 GTF3C3Q9Y5Q9 886 aa27.93■■■□□ 2.06
VMAC-201ENST00000339485 PCF11O94913 1555 aaKnown RBP27.92■■■□□ 2.06
VMAC-201ENST00000339485 UGGT2Q9NYU1 1516 aa27.92■■■□□ 2.06
VMAC-201ENST00000339485 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
VMAC-201ENST00000339485 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
VMAC-201ENST00000339485 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
VMAC-201ENST00000339485 FYCO1Q9BQS8 1478 aa27.81■■■□□ 2.04
VMAC-201ENST00000339485 CASKIN1Q8WXD9 1431 aa27.79■■■□□ 2.04
VMAC-201ENST00000339485 TIAM1Q13009 1591 aa27.78■■■□□ 2.04
VMAC-201ENST00000339485 ATP1B4Q9UN42 357 aaPredicted RBP27.77■■■□□ 2.04
VMAC-201ENST00000339485 KANK4Q5T7N3 995 aaPredicted RBP27.76■■■□□ 2.03
VMAC-201ENST00000339485 CFAP43Q8NDM7 1665 aa27.74■■■□□ 2.03
VMAC-201ENST00000339485 ZNF316A6NFI3 1004 aaPredicted RBP27.74■■■□□ 2.03
VMAC-201ENST00000339485 MAP3K1Q13233 1512 aa27.72■■■□□ 2.03
VMAC-201ENST00000339485 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
VMAC-201ENST00000339485 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
VMAC-201ENST00000339485 CARMIL2Q6F5E8 1435 aa27.64■■■□□ 2.02
VMAC-201ENST00000339485 LRRC9Q6ZRR7 1453 aa27.63■■■□□ 2.01
VMAC-201ENST00000339485 HECW1Q76N89 1606 aa27.61■■■□□ 2.01
VMAC-201ENST00000339485 SHROOM2Q13796 1616 aa27.58■■■□□ 2.01
VMAC-201ENST00000339485 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
VMAC-201ENST00000339485 CLASP1Q7Z460 1538 aa27.56■■■□□ 2
VMAC-201ENST00000339485 RAPGEF6Q8TEU7 1601 aa27.54■■■□□ 2
VMAC-201ENST00000339485 CCDC18Q5T9S5 1454 aa27.52■■■□□ 2
VMAC-201ENST00000339485 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
VMAC-201ENST00000339485 MYT1Q01538 1121 aa27.48■■□□□ 1.99
VMAC-201ENST00000339485 CDK13Q14004 1512 aaKnown RBP27.48■■□□□ 1.99
VMAC-201ENST00000339485 PLB1Q6P1J6 1458 aa27.48■■□□□ 1.99
VMAC-201ENST00000339485 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
VMAC-201ENST00000339485 NUP153P49790 1475 aaKnown RBP27.46■■□□□ 1.99
VMAC-201ENST00000339485 MTUS2Q5JR59 1369 aa27.45■■□□□ 1.98
VMAC-201ENST00000339485 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
VMAC-201ENST00000339485 MIER1Q8N108 512 aa27.43■■□□□ 1.98
VMAC-201ENST00000339485 YTHDC1Q96MU7 727 aaKnown RBP27.43■■□□□ 1.98
VMAC-201ENST00000339485 MAGI3Q5TCQ9 1506 aa27.42■■□□□ 1.98
VMAC-201ENST00000339485 EHBP1L1Q8N3D4 1523 aa27.41■■□□□ 1.98
VMAC-201ENST00000339485 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
VMAC-201ENST00000339485 RRBP1Q9P2E9 1410 aaKnown RBP27.39■■□□□ 1.98
VMAC-201ENST00000339485 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.98
VMAC-201ENST00000339485 ABCA8O94911 1581 aa27.39■■□□□ 1.98
VMAC-201ENST00000339485 PTPRGP23470 1445 aa27.38■■□□□ 1.97
VMAC-201ENST00000339485 SUPT6HQ7KZ85 1726 aaKnown RBP27.35■■□□□ 1.97
VMAC-201ENST00000339485 CCNB3Q8WWL7 1395 aa27.33■■□□□ 1.97
VMAC-201ENST00000339485 NCOA2Q15596 1464 aa27.31■■□□□ 1.96
VMAC-201ENST00000339485 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
VMAC-201ENST00000339485 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
VMAC-201ENST00000339485 UACAQ9BZF9 1416 aa27.22■■□□□ 1.95
VMAC-201ENST00000339485 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.95
VMAC-201ENST00000339485 ATP10BO94823 1461 aa27.2■■□□□ 1.95
VMAC-201ENST00000339485 FGD6Q6ZV73 1430 aa27.18■■□□□ 1.94
VMAC-201ENST00000339485 MYOM3Q5VTT5 1437 aa27.18■■□□□ 1.94
VMAC-201ENST00000339485 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
VMAC-201ENST00000339485 FAM50AQ14320 339 aaKnown RBP27.16■■□□□ 1.94
VMAC-201ENST00000339485 TROQ12816 1431 aaPredicted RBP27.16■■□□□ 1.94
VMAC-201ENST00000339485 ITGAEP38570 1179 aa27.13■■□□□ 1.93
VMAC-201ENST00000339485 KIF14Q15058 1648 aa27.11■■□□□ 1.93
VMAC-201ENST00000339485 ADCY10Q96PN6 1610 aa27.1■■□□□ 1.93
VMAC-201ENST00000339485 CLSPNQ9HAW4 1339 aa27.09■■□□□ 1.93
VMAC-201ENST00000339485 PTPN23Q9H3S7 1636 aa27.07■■□□□ 1.92
VMAC-201ENST00000339485 PLEKHD1A6NEE1 506 aa27.06■■□□□ 1.92
VMAC-201ENST00000339485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.06■■□□□ 1.92
VMAC-201ENST00000339485 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
VMAC-201ENST00000339485 DHX57Q6P158 1386 aaKnown RBP27.03■■□□□ 1.92
VMAC-201ENST00000339485 ZCCHC11Q5TAX3 1644 aaKnown RBP27.02■■□□□ 1.92
VMAC-201ENST00000339485 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
VMAC-201ENST00000339485 TCOF1Q13428 1488 aaKnown RBP26.98■■□□□ 1.91
VMAC-201ENST00000339485 ITSN2Q9NZM3 1697 aa26.98■■□□□ 1.91
VMAC-201ENST00000339485 KDM5BQ9UGL1 1544 aa26.97■■□□□ 1.91
VMAC-201ENST00000339485 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
VMAC-201ENST00000339485 CDC42BPAQ5VT25 1732 aa26.93■■□□□ 1.9
VMAC-201ENST00000339485 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms