RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 GRIN2AQ12879 1464 aa23.39■■□□□ 1.33
CDK5RAP3-201ENST00000338399 FBLN2P98095 1184 aa23.37■■□□□ 1.33
CDK5RAP3-201ENST00000338399 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
CDK5RAP3-201ENST00000338399 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
CDK5RAP3-201ENST00000338399 IQGAP2Q13576 1575 aa23.26■■□□□ 1.31
CDK5RAP3-201ENST00000338399 CHD1O14646 1710 aa23.26■■□□□ 1.31
CDK5RAP3-201ENST00000338399 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
CDK5RAP3-201ENST00000338399 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
CDK5RAP3-201ENST00000338399 KIAA0586Q9BVV6 1533 aa23.24■■□□□ 1.31
CDK5RAP3-201ENST00000338399 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
CDK5RAP3-201ENST00000338399 NUP160Q12769 1436 aa23.22■■□□□ 1.31
CDK5RAP3-201ENST00000338399 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
CDK5RAP3-201ENST00000338399 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
CDK5RAP3-201ENST00000338399 FHOD3Q2V2M9 1422 aa23.15■■□□□ 1.3
CDK5RAP3-201ENST00000338399 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.29
CDK5RAP3-201ENST00000338399 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
CDK5RAP3-201ENST00000338399 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
CDK5RAP3-201ENST00000338399 DISP1Q96F81 1524 aa23.04■■□□□ 1.28
CDK5RAP3-201ENST00000338399 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
CDK5RAP3-201ENST00000338399 APLP2Q06481 763 aa23.02■■□□□ 1.28
CDK5RAP3-201ENST00000338399 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
CDK5RAP3-201ENST00000338399 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
CDK5RAP3-201ENST00000338399 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
CDK5RAP3-201ENST00000338399 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.27
CDK5RAP3-201ENST00000338399 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
CDK5RAP3-201ENST00000338399 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.26
CDK5RAP3-201ENST00000338399 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
CDK5RAP3-201ENST00000338399 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
CDK5RAP3-201ENST00000338399 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
CDK5RAP3-201ENST00000338399 PRG4Q92954 1404 aaPredicted RBP22.93■■□□□ 1.26
CDK5RAP3-201ENST00000338399 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
CDK5RAP3-201ENST00000338399 TIAM1Q13009 1591 aa22.86■■□□□ 1.25
CDK5RAP3-201ENST00000338399 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
CDK5RAP3-201ENST00000338399 KANK4Q5T7N3 995 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-201ENST00000338399 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
CDK5RAP3-201ENST00000338399 LRRIQ1Q96JM4 1722 aa22.84■■□□□ 1.25
CDK5RAP3-201ENST00000338399 CFAP43Q8NDM7 1665 aa22.83■■□□□ 1.25
CDK5RAP3-201ENST00000338399 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.24
CDK5RAP3-201ENST00000338399 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
CDK5RAP3-201ENST00000338399 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
CDK5RAP3-201ENST00000338399 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
CDK5RAP3-201ENST00000338399 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
CDK5RAP3-201ENST00000338399 PTPRGP23470 1445 aa22.75■■□□□ 1.23
CDK5RAP3-201ENST00000338399 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CDK5RAP3-201ENST00000338399 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
CDK5RAP3-201ENST00000338399 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
CDK5RAP3-201ENST00000338399 ARID3CA6NKF2 412 aa22.72■■□□□ 1.23
CDK5RAP3-201ENST00000338399 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
CDK5RAP3-201ENST00000338399 ABCA8O94911 1581 aa22.71■■□□□ 1.23
CDK5RAP3-201ENST00000338399 CDK13Q14004 1512 aaKnown RBP22.7■■□□□ 1.22
CDK5RAP3-201ENST00000338399 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
CDK5RAP3-201ENST00000338399 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
CDK5RAP3-201ENST00000338399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
CDK5RAP3-201ENST00000338399 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-201ENST00000338399 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
CDK5RAP3-201ENST00000338399 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
CDK5RAP3-201ENST00000338399 ATP10BO94823 1461 aa22.56■■□□□ 1.2
CDK5RAP3-201ENST00000338399 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
CDK5RAP3-201ENST00000338399 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-201ENST00000338399 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
CDK5RAP3-201ENST00000338399 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
CDK5RAP3-201ENST00000338399 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
CDK5RAP3-201ENST00000338399 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
CDK5RAP3-201ENST00000338399 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
CDK5RAP3-201ENST00000338399 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
CDK5RAP3-201ENST00000338399 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
CDK5RAP3-201ENST00000338399 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
CDK5RAP3-201ENST00000338399 CCNB3Q8WWL7 1395 aa22.45■■□□□ 1.19
CDK5RAP3-201ENST00000338399 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
CDK5RAP3-201ENST00000338399 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
CDK5RAP3-201ENST00000338399 KDM5BQ9UGL1 1544 aa22.42■■□□□ 1.18
CDK5RAP3-201ENST00000338399 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
CDK5RAP3-201ENST00000338399 KIF14Q15058 1648 aa22.4■■□□□ 1.18
CDK5RAP3-201ENST00000338399 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
CDK5RAP3-201ENST00000338399 RIMBP3CA6NJZ7 1639 aa22.38■■□□□ 1.17
CDK5RAP3-201ENST00000338399 RIMBP3BA6NNM3 1639 aa22.38■■□□□ 1.17
CDK5RAP3-201ENST00000338399 RIMBP3Q9UFD9 1639 aa22.38■■□□□ 1.17
CDK5RAP3-201ENST00000338399 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
CDK5RAP3-201ENST00000338399 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
CDK5RAP3-201ENST00000338399 ITGAEP38570 1179 aa22.3■■□□□ 1.16
CDK5RAP3-201ENST00000338399 ABCC10Q5T3U5 1492 aa22.3■■□□□ 1.16
CDK5RAP3-201ENST00000338399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
CDK5RAP3-201ENST00000338399 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
CDK5RAP3-201ENST00000338399 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
CDK5RAP3-201ENST00000338399 ITSN2Q9NZM3 1697 aa22.28■■□□□ 1.16
CDK5RAP3-201ENST00000338399 GPATCH8Q9UKJ3 1502 aaKnown RBP22.27■■□□□ 1.16
CDK5RAP3-201ENST00000338399 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDK5RAP3-201ENST00000338399 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
CDK5RAP3-201ENST00000338399 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
CDK5RAP3-201ENST00000338399 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-201ENST00000338399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.153e-9■■□□□ 12.3
CDK5RAP3-201ENST00000338399 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
CDK5RAP3-201ENST00000338399 WDR7Q9Y4E6 1490 aa22.21■■□□□ 1.15
CDK5RAP3-201ENST00000338399 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
CDK5RAP3-201ENST00000338399 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
CDK5RAP3-201ENST00000338399 ZNF644Q9H582 1327 aaPredicted RBP22.18■■□□□ 1.14
CDK5RAP3-201ENST00000338399 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
CDK5RAP3-201ENST00000338399 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
CDK5RAP3-201ENST00000338399 PREX2Q70Z35 1606 aa22.16■■□□□ 1.14
CDK5RAP3-201ENST00000338399 MYO5CQ9NQX4 1742 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms