RNA–Protein interactions for RNA: ENST00000335272.9

PITPNB-202, Transcript of phosphatidylinositol transfer protein beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNB, Length 2,926 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-202ENST00000335272 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
PITPNB-202ENST00000335272 CTTNBP2Q8WZ74 1663 aa23.43■■□□□ 1.34
PITPNB-202ENST00000335272 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
PITPNB-202ENST00000335272 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
PITPNB-202ENST00000335272 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
PITPNB-202ENST00000335272 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
PITPNB-202ENST00000335272 EFCAB5A4FU69 1503 aa23.35■■□□□ 1.33
PITPNB-202ENST00000335272 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
PITPNB-202ENST00000335272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
PITPNB-202ENST00000335272 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
PITPNB-202ENST00000335272 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
PITPNB-202ENST00000335272 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
PITPNB-202ENST00000335272 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
PITPNB-202ENST00000335272 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
PITPNB-202ENST00000335272 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
PITPNB-202ENST00000335272 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
PITPNB-202ENST00000335272 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
PITPNB-202ENST00000335272 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
PITPNB-202ENST00000335272 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
PITPNB-202ENST00000335272 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
PITPNB-202ENST00000335272 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
PITPNB-202ENST00000335272 FYCO1Q9BQS8 1478 aa23.18■■□□□ 1.3
PITPNB-202ENST00000335272 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
PITPNB-202ENST00000335272 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
PITPNB-202ENST00000335272 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
PITPNB-202ENST00000335272 FBLN2P98095 1184 aa23.15■■□□□ 1.3
PITPNB-202ENST00000335272 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
PITPNB-202ENST00000335272 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
PITPNB-202ENST00000335272 RRBP1Q9P2E9 1410 aaKnown RBP23.11■■□□□ 1.29
PITPNB-202ENST00000335272 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
PITPNB-202ENST00000335272 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
PITPNB-202ENST00000335272 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
PITPNB-202ENST00000335272 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
PITPNB-202ENST00000335272 UGGT2Q9NYU1 1516 aa23.04■■□□□ 1.28
PITPNB-202ENST00000335272 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
PITPNB-202ENST00000335272 ITGAEP38570 1179 aa23■■□□□ 1.27
PITPNB-202ENST00000335272 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
PITPNB-202ENST00000335272 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
PITPNB-202ENST00000335272 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
PITPNB-202ENST00000335272 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
PITPNB-202ENST00000335272 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
PITPNB-202ENST00000335272 NUP160Q12769 1436 aa22.93■■□□□ 1.26
PITPNB-202ENST00000335272 KIAA0556O60303 1618 aa22.93■■□□□ 1.26
PITPNB-202ENST00000335272 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
PITPNB-202ENST00000335272 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
PITPNB-202ENST00000335272 HECW1Q76N89 1606 aa22.89■■□□□ 1.26
PITPNB-202ENST00000335272 CCDC18Q5T9S5 1454 aa22.89■■□□□ 1.25
PITPNB-202ENST00000335272 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
PITPNB-202ENST00000335272 CARMIL2Q6F5E8 1435 aa22.83■■□□□ 1.24
PITPNB-202ENST00000335272 EHBP1L1Q8N3D4 1523 aa22.82■■□□□ 1.24
PITPNB-202ENST00000335272 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
PITPNB-202ENST00000335272 CDK13Q14004 1512 aaKnown RBP22.82■■□□□ 1.24
PITPNB-202ENST00000335272 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
PITPNB-202ENST00000335272 FGD6Q6ZV73 1430 aa22.8■■□□□ 1.24
PITPNB-202ENST00000335272 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
PITPNB-202ENST00000335272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
PITPNB-202ENST00000335272 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
PITPNB-202ENST00000335272 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
PITPNB-202ENST00000335272 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
PITPNB-202ENST00000335272 DHX57Q6P158 1386 aaKnown RBP22.74■■□□□ 1.23
PITPNB-202ENST00000335272 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
PITPNB-202ENST00000335272 CHD1O14646 1710 aa22.72■■□□□ 1.23
PITPNB-202ENST00000335272 RAB3GAP2Q9H2M9 1393 aa22.72■■□□□ 1.23
PITPNB-202ENST00000335272 SETD5Q9C0A6 1442 aa22.7■■□□□ 1.22
PITPNB-202ENST00000335272 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
PITPNB-202ENST00000335272 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
PITPNB-202ENST00000335272 PRG4Q92954 1404 aaPredicted RBP22.69■■□□□ 1.22
PITPNB-202ENST00000335272 CLSPNQ9HAW4 1339 aa22.66■■□□□ 1.22
PITPNB-202ENST00000335272 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
PITPNB-202ENST00000335272 PTPRGP23470 1445 aa22.6■■□□□ 1.21
PITPNB-202ENST00000335272 PTPRKQ15262 1439 aa22.59■■□□□ 1.21
PITPNB-202ENST00000335272 ABCA8O94911 1581 aa22.56■■□□□ 1.2
PITPNB-202ENST00000335272 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
PITPNB-202ENST00000335272 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
PITPNB-202ENST00000335272 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
PITPNB-202ENST00000335272 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
PITPNB-202ENST00000335272 SHROOM2Q13796 1616 aa22.51■■□□□ 1.19
PITPNB-202ENST00000335272 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
PITPNB-202ENST00000335272 ATP10BO94823 1461 aa22.51■■□□□ 1.19
PITPNB-202ENST00000335272 HFM1A2PYH4 1435 aa22.49■■□□□ 1.19
PITPNB-202ENST00000335272 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
PITPNB-202ENST00000335272 ZNF644Q9H582 1327 aaPredicted RBP22.46■■□□□ 1.19
PITPNB-202ENST00000335272 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
PITPNB-202ENST00000335272 NAIPQ13075 1403 aa22.45■■□□□ 1.18
PITPNB-202ENST00000335272 CFDP1Q9UEE9 299 aaPredicted RBP22.44■■□□□ 1.18
PITPNB-202ENST00000335272 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
PITPNB-202ENST00000335272 UACAQ9BZF9 1416 aa22.44■■□□□ 1.18
PITPNB-202ENST00000335272 KIF14Q15058 1648 aa22.43■■□□□ 1.18
PITPNB-202ENST00000335272 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
PITPNB-202ENST00000335272 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
PITPNB-202ENST00000335272 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
PITPNB-202ENST00000335272 GPATCH8Q9UKJ3 1502 aaKnown RBP22.4■■□□□ 1.18
PITPNB-202ENST00000335272 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
PITPNB-202ENST00000335272 DAPK1P53355 1430 aa22.37■■□□□ 1.17
PITPNB-202ENST00000335272 SIN3AQ96ST3 1273 aa22.35■■□□□ 1.17
PITPNB-202ENST00000335272 NEUROD1Q13562 356 aa22.35■■□□□ 1.17
PITPNB-202ENST00000335272 ABCC5O15440 1437 aa22.35■■□□□ 1.17
PITPNB-202ENST00000335272 ITSN2Q9NZM3 1697 aa22.34■■□□□ 1.17
PITPNB-202ENST00000335272 CAMSAP2Q08AD1 1489 aa22.33■■□□□ 1.17
PITPNB-202ENST00000335272 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms