RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 FBLN2P98095 1184 aa26.21■■□□□ 1.79
PDCD1-201ENST00000334409 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.79
PDCD1-201ENST00000334409 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
PDCD1-201ENST00000334409 CEP162Q5TB80 1403 aa26.15■■□□□ 1.78
PDCD1-201ENST00000334409 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
PDCD1-201ENST00000334409 MAGI1Q96QZ7 1491 aaPredicted RBP26.12■■□□□ 1.77
PDCD1-201ENST00000334409 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
PDCD1-201ENST00000334409 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
PDCD1-201ENST00000334409 CLIP1P30622 1438 aa26.03■■□□□ 1.76
PDCD1-201ENST00000334409 CTTNBP2Q8WZ74 1663 aa25.97■■□□□ 1.75
PDCD1-201ENST00000334409 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
PDCD1-201ENST00000334409 CHD1O14646 1710 aa25.93■■□□□ 1.74
PDCD1-201ENST00000334409 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
PDCD1-201ENST00000334409 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
PDCD1-201ENST00000334409 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
PDCD1-201ENST00000334409 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
PDCD1-201ENST00000334409 NUP160Q12769 1436 aa25.83■■□□□ 1.73
PDCD1-201ENST00000334409 KIAA0586Q9BVV6 1533 aa25.83■■□□□ 1.73
PDCD1-201ENST00000334409 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
PDCD1-201ENST00000334409 FHOD3Q2V2M9 1422 aa25.77■■□□□ 1.72
PDCD1-201ENST00000334409 TTBK1Q5TCY1 1321 aaPredicted RBP25.75■■□□□ 1.71
PDCD1-201ENST00000334409 JPH4Q96JJ6 628 aa25.75■■□□□ 1.71
PDCD1-201ENST00000334409 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.71
PDCD1-201ENST00000334409 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
PDCD1-201ENST00000334409 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
PDCD1-201ENST00000334409 UGGT2Q9NYU1 1516 aa25.67■■□□□ 1.7
PDCD1-201ENST00000334409 CENPBP07199 599 aaPredicted RBP25.64■■□□□ 1.7
PDCD1-201ENST00000334409 DISP1Q96F81 1524 aa25.64■■□□□ 1.69
PDCD1-201ENST00000334409 ATP1B4Q9UN42 357 aaPredicted RBP25.64■■□□□ 1.69
PDCD1-201ENST00000334409 OSCARQ8IYS5 282 aa25.6■■□□□ 1.69
PDCD1-201ENST00000334409 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
PDCD1-201ENST00000334409 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
PDCD1-201ENST00000334409 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
PDCD1-201ENST00000334409 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
PDCD1-201ENST00000334409 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
PDCD1-201ENST00000334409 APLP2Q06481 763 aa25.52■■□□□ 1.68
PDCD1-201ENST00000334409 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
PDCD1-201ENST00000334409 FMN1Q68DA7 1419 aa25.51■■□□□ 1.67
PDCD1-201ENST00000334409 PCF11O94913 1555 aaKnown RBP25.5■■□□□ 1.67
PDCD1-201ENST00000334409 GTF3C3Q9Y5Q9 886 aa25.49■■□□□ 1.67
PDCD1-201ENST00000334409 SHROOM2Q13796 1616 aa25.49■■□□□ 1.67
PDCD1-201ENST00000334409 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
PDCD1-201ENST00000334409 CASKIN1Q8WXD9 1431 aa25.43■■□□□ 1.66
PDCD1-201ENST00000334409 KANK4Q5T7N3 995 aaPredicted RBP25.42■■□□□ 1.66
PDCD1-201ENST00000334409 FYCO1Q9BQS8 1478 aa25.38■■□□□ 1.65
PDCD1-201ENST00000334409 PLB1Q6P1J6 1458 aa25.38■■□□□ 1.65
PDCD1-201ENST00000334409 PTPRGP23470 1445 aa25.38■■□□□ 1.65
PDCD1-201ENST00000334409 LRRIQ1Q96JM4 1722 aa25.33■■□□□ 1.64
PDCD1-201ENST00000334409 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
PDCD1-201ENST00000334409 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
PDCD1-201ENST00000334409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.28■■□□□ 1.64
PDCD1-201ENST00000334409 HNRNPUL2Q1KMD3 747 aaKnown RBP25.28■■□□□ 1.64
PDCD1-201ENST00000334409 HECW1Q76N89 1606 aa25.27■■□□□ 1.64
PDCD1-201ENST00000334409 CDK13Q14004 1512 aaKnown RBP25.27■■□□□ 1.64
PDCD1-201ENST00000334409 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
PDCD1-201ENST00000334409 EPRSP07814 1512 aaKnown RBP25.24■■□□□ 1.63
PDCD1-201ENST00000334409 ABCA8O94911 1581 aa25.22■■□□□ 1.63
PDCD1-201ENST00000334409 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
PDCD1-201ENST00000334409 CFAP43Q8NDM7 1665 aa25.22■■□□□ 1.63
PDCD1-201ENST00000334409 LRRC9Q6ZRR7 1453 aa25.21■■□□□ 1.63
PDCD1-201ENST00000334409 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
PDCD1-201ENST00000334409 MAP3K1Q13233 1512 aa25.2■■□□□ 1.62
PDCD1-201ENST00000334409 UACAQ9BZF9 1416 aa25.19■■□□□ 1.62
PDCD1-201ENST00000334409 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
PDCD1-201ENST00000334409 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
PDCD1-201ENST00000334409 MAGI3Q5TCQ9 1506 aa25.14■■□□□ 1.62
PDCD1-201ENST00000334409 ARHGEF11O15085 1522 aa25.13■■□□□ 1.61
PDCD1-201ENST00000334409 ATP10BO94823 1461 aa25.12■■□□□ 1.61
PDCD1-201ENST00000334409 ABCC2Q92887 1545 aa25.09■■□□□ 1.61
PDCD1-201ENST00000334409 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
PDCD1-201ENST00000334409 CDK11AQ9UQ88 783 aaPredicted RBP25.04■■□□□ 1.6
PDCD1-201ENST00000334409 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
PDCD1-201ENST00000334409 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
PDCD1-201ENST00000334409 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
PDCD1-201ENST00000334409 PHLDB1Q86UU1 1377 aa25.03■■□□□ 1.6
PDCD1-201ENST00000334409 ADCY10Q96PN6 1610 aa25.02■■□□□ 1.6
PDCD1-201ENST00000334409 PLEKHD1A6NEE1 506 aa25.02■■□□□ 1.6
PDCD1-201ENST00000334409 EHBP1L1Q8N3D4 1523 aa25.01■■□□□ 1.59
PDCD1-201ENST00000334409 UHRF1BP1LA0JNW5 1464 aa24.99■■□□□ 1.59
PDCD1-201ENST00000334409 NCOA2Q15596 1464 aa24.98■■□□□ 1.59
PDCD1-201ENST00000334409 ZCCHC11Q5TAX3 1644 aaKnown RBP24.96■■□□□ 1.59
PDCD1-201ENST00000334409 TROQ12816 1431 aaPredicted RBP24.95■■□□□ 1.59
PDCD1-201ENST00000334409 SUPT6HQ7KZ85 1726 aaKnown RBP24.95■■□□□ 1.58
PDCD1-201ENST00000334409 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
PDCD1-201ENST00000334409 KDM5BQ9UGL1 1544 aa24.93■■□□□ 1.58
PDCD1-201ENST00000334409 KIF14Q15058 1648 aa24.91■■□□□ 1.58
PDCD1-201ENST00000334409 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
PDCD1-201ENST00000334409 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
PDCD1-201ENST00000334409 ITGAEP38570 1179 aa24.87■■□□□ 1.57
PDCD1-201ENST00000334409 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
PDCD1-201ENST00000334409 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
PDCD1-201ENST00000334409 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
PDCD1-201ENST00000334409 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.57
PDCD1-201ENST00000334409 FGD6Q6ZV73 1430 aa24.81■■□□□ 1.56
PDCD1-201ENST00000334409 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
PDCD1-201ENST00000334409 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
PDCD1-201ENST00000334409 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
PDCD1-201ENST00000334409 ZNF316A6NFI3 1004 aaPredicted RBP24.76■■□□□ 1.55
PDCD1-201ENST00000334409 ABCC10Q5T3U5 1492 aa24.75■■□□□ 1.55
PDCD1-201ENST00000334409 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms