RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 WDR62O43379 1518 aa24.94■■□□□ 1.58
LCK-201ENST00000333070 APLP2Q06481 763 aa24.91■■□□□ 1.58
LCK-201ENST00000333070 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
LCK-201ENST00000333070 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
LCK-201ENST00000333070 CTTNBP2Q8WZ74 1663 aa24.84■■□□□ 1.57
LCK-201ENST00000333070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
LCK-201ENST00000333070 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
LCK-201ENST00000333070 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
LCK-201ENST00000333070 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
LCK-201ENST00000333070 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
LCK-201ENST00000333070 THOC2Q8NI27 1593 aaKnown RBP24.78■■□□□ 1.56
LCK-201ENST00000333070 EFCAB5A4FU69 1503 aa24.76■■□□□ 1.55
LCK-201ENST00000333070 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
LCK-201ENST00000333070 FHAD1B1AJZ9 1412 aa24.73■■□□□ 1.55
LCK-201ENST00000333070 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
LCK-201ENST00000333070 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
LCK-201ENST00000333070 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
LCK-201ENST00000333070 MAP3K1Q13233 1512 aa24.69■■□□□ 1.54
LCK-201ENST00000333070 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
LCK-201ENST00000333070 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
LCK-201ENST00000333070 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
LCK-201ENST00000333070 TIAM1Q13009 1591 aa24.62■■□□□ 1.53
LCK-201ENST00000333070 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
LCK-201ENST00000333070 PCF11O94913 1555 aaKnown RBP24.61■■□□□ 1.53
LCK-201ENST00000333070 CASKIN1Q8WXD9 1431 aa24.56■■□□□ 1.52
LCK-201ENST00000333070 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
LCK-201ENST00000333070 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
LCK-201ENST00000333070 CFAP43Q8NDM7 1665 aa24.54■■□□□ 1.52
LCK-201ENST00000333070 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
LCK-201ENST00000333070 RRBP1Q9P2E9 1410 aaKnown RBP24.53■■□□□ 1.52
LCK-201ENST00000333070 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
LCK-201ENST00000333070 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
LCK-201ENST00000333070 ZNF316A6NFI3 1004 aaPredicted RBP24.5■■□□□ 1.51
LCK-201ENST00000333070 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
LCK-201ENST00000333070 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
LCK-201ENST00000333070 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
LCK-201ENST00000333070 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
LCK-201ENST00000333070 KIAA0586Q9BVV6 1533 aa24.42■■□□□ 1.5
LCK-201ENST00000333070 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
LCK-201ENST00000333070 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
LCK-201ENST00000333070 SYNJ2O15056 1496 aa24.39■■□□□ 1.49
LCK-201ENST00000333070 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
LCK-201ENST00000333070 PHLDB1Q86UU1 1377 aa24.34■■□□□ 1.49
LCK-201ENST00000333070 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
LCK-201ENST00000333070 YTHDC1Q96MU7 727 aaKnown RBP24.31■■□□□ 1.48
LCK-201ENST00000333070 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
LCK-201ENST00000333070 DISP1Q96F81 1524 aa24.28■■□□□ 1.48
LCK-201ENST00000333070 NUP160Q12769 1436 aa24.26■■□□□ 1.47
LCK-201ENST00000333070 KIAA0556O60303 1618 aa24.26■■□□□ 1.47
LCK-201ENST00000333070 MIER1Q8N108 512 aa24.23■■□□□ 1.47
LCK-201ENST00000333070 CCDC18Q5T9S5 1454 aa24.23■■□□□ 1.47
LCK-201ENST00000333070 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
LCK-201ENST00000333070 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
LCK-201ENST00000333070 FBLN2P98095 1184 aa24.2■■□□□ 1.47
LCK-201ENST00000333070 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
LCK-201ENST00000333070 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
LCK-201ENST00000333070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.17■■□□□ 1.46
LCK-201ENST00000333070 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
LCK-201ENST00000333070 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
LCK-201ENST00000333070 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
LCK-201ENST00000333070 CLSPNQ9HAW4 1339 aa24.13■■□□□ 1.45
LCK-201ENST00000333070 ITGAEP38570 1179 aa24.12■■□□□ 1.45
LCK-201ENST00000333070 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
LCK-201ENST00000333070 JPH4Q96JJ6 628 aa24.11■■□□□ 1.45
LCK-201ENST00000333070 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
LCK-201ENST00000333070 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
LCK-201ENST00000333070 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
LCK-201ENST00000333070 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
LCK-201ENST00000333070 RAPGEF6Q8TEU7 1601 aa24.08■■□□□ 1.45
LCK-201ENST00000333070 MYOM3Q5VTT5 1437 aa24.06■■□□□ 1.44
LCK-201ENST00000333070 CARMIL2Q6F5E8 1435 aa24.06■■□□□ 1.44
LCK-201ENST00000333070 NUP153P49790 1475 aaKnown RBP24.05■■□□□ 1.44
LCK-201ENST00000333070 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
LCK-201ENST00000333070 RAB3GAP2Q9H2M9 1393 aa24.01■■□□□ 1.43
LCK-201ENST00000333070 CHD1O14646 1710 aa24.01■■□□□ 1.43
LCK-201ENST00000333070 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
LCK-201ENST00000333070 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
LCK-201ENST00000333070 PTPN23Q9H3S7 1636 aa23.94■■□□□ 1.42
LCK-201ENST00000333070 TCOF1Q13428 1488 aaKnown RBP23.92■■□□□ 1.42
LCK-201ENST00000333070 ABCA8O94911 1581 aa23.9■■□□□ 1.42
LCK-201ENST00000333070 PTPRKQ15262 1439 aa23.9■■□□□ 1.42
LCK-201ENST00000333070 SUPT16HQ9Y5B9 1047 aaKnown RBP23.9■■□□□ 1.42
LCK-201ENST00000333070 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
LCK-201ENST00000333070 MIA2Q96PC5 1412 aa23.9■■□□□ 1.42
LCK-201ENST00000333070 CDK11AQ9UQ88 783 aaPredicted RBP23.89■■□□□ 1.41
LCK-201ENST00000333070 SHROOM2Q13796 1616 aa23.87■■□□□ 1.41
LCK-201ENST00000333070 ANP32EQ9BTT0 268 aa23.85■■□□□ 1.41
LCK-201ENST00000333070 TROQ12816 1431 aaPredicted RBP23.85■■□□□ 1.41
LCK-201ENST00000333070 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
LCK-201ENST00000333070 MAPKBP1O60336 1514 aa23.81■■□□□ 1.4
LCK-201ENST00000333070 PTPRGP23470 1445 aa23.8■■□□□ 1.4
LCK-201ENST00000333070 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
LCK-201ENST00000333070 TSHZ2Q9NRE2 1034 aa23.79■■□□□ 1.4
LCK-201ENST00000333070 ATP10BO94823 1461 aa23.78■■□□□ 1.4
LCK-201ENST00000333070 NAIPQ13075 1403 aa23.77■■□□□ 1.39
LCK-201ENST00000333070 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
LCK-201ENST00000333070 KIF14Q15058 1648 aa23.72■■□□□ 1.39
LCK-201ENST00000333070 AKNAQ7Z591 1439 aa23.71■■□□□ 1.39
LCK-201ENST00000333070 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
LCK-201ENST00000333070 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms