RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
C11orf54-201ENST00000331239 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
C11orf54-201ENST00000331239 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
C11orf54-201ENST00000331239 CLASP1Q7Z460 1538 aa15.21■□□□□ 0.03
C11orf54-201ENST00000331239 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
C11orf54-201ENST00000331239 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
C11orf54-201ENST00000331239 FBLN2P98095 1184 aa15.19■□□□□ 0.02
C11orf54-201ENST00000331239 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
C11orf54-201ENST00000331239 SAMD9Q5K651 1589 aa15.16■□□□□ 0.02
C11orf54-201ENST00000331239 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
C11orf54-201ENST00000331239 CLIP1P30622 1438 aa15.14■□□□□ 0.01
C11orf54-201ENST00000331239 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
C11orf54-201ENST00000331239 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
C11orf54-201ENST00000331239 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
C11orf54-201ENST00000331239 ARHGAP35Q9NRY4 1499 aa15.09■□□□□ 0.01
C11orf54-201ENST00000331239 KIAA0556O60303 1618 aa15.08■□□□□ 0
C11orf54-201ENST00000331239 DISP1Q96F81 1524 aa15.07■□□□□ 0
C11orf54-201ENST00000331239 FMN1Q68DA7 1419 aa15.04■□□□□ -0
C11orf54-201ENST00000331239 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
C11orf54-201ENST00000331239 EHMT2Q96KQ7 1210 aa15.02□□□□□ -0.01
C11orf54-201ENST00000331239 ARAP1Q96P48 1450 aa15.02□□□□□ -0.01
C11orf54-201ENST00000331239 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
C11orf54-201ENST00000331239 CASKIN1Q8WXD9 1431 aa14.96□□□□□ -0.01
C11orf54-201ENST00000331239 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
C11orf54-201ENST00000331239 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
C11orf54-201ENST00000331239 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
C11orf54-201ENST00000331239 PTPRGP23470 1445 aa14.94□□□□□ -0.02
C11orf54-201ENST00000331239 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
C11orf54-201ENST00000331239 ABCA8O94911 1581 aa14.92□□□□□ -0.02
C11orf54-201ENST00000331239 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
C11orf54-201ENST00000331239 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
C11orf54-201ENST00000331239 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
C11orf54-201ENST00000331239 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
C11orf54-201ENST00000331239 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
C11orf54-201ENST00000331239 UACAQ9BZF9 1416 aa14.88□□□□□ -0.03
C11orf54-201ENST00000331239 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
C11orf54-201ENST00000331239 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
C11orf54-201ENST00000331239 PCF11O94913 1555 aaKnown RBP14.86□□□□□ -0.03
C11orf54-201ENST00000331239 ABCC2Q92887 1545 aa14.86□□□□□ -0.03
C11orf54-201ENST00000331239 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
C11orf54-201ENST00000331239 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
C11orf54-201ENST00000331239 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
C11orf54-201ENST00000331239 CFAP43Q8NDM7 1665 aa14.83□□□□□ -0.04
C11orf54-201ENST00000331239 APLP2Q06481 763 aa14.82□□□□□ -0.04
C11orf54-201ENST00000331239 NUP153P49790 1475 aaKnown RBP14.81□□□□□ -0.04
C11orf54-201ENST00000331239 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
C11orf54-201ENST00000331239 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
C11orf54-201ENST00000331239 PLB1Q6P1J6 1458 aa14.8□□□□□ -0.04
C11orf54-201ENST00000331239 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
C11orf54-201ENST00000331239 HRCP23327 699 aa14.79□□□□□ -0.04
C11orf54-201ENST00000331239 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
C11orf54-201ENST00000331239 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
C11orf54-201ENST00000331239 LRRIQ1Q96JM4 1722 aa14.76□□□□□ -0.05
C11orf54-201ENST00000331239 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
C11orf54-201ENST00000331239 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
C11orf54-201ENST00000331239 ATP10BO94823 1461 aa14.75□□□□□ -0.05
C11orf54-201ENST00000331239 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
C11orf54-201ENST00000331239 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
C11orf54-201ENST00000331239 ZCCHC11Q5TAX3 1644 aaKnown RBP14.71□□□□□ -0.05
C11orf54-201ENST00000331239 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
C11orf54-201ENST00000331239 TROQ12816 1431 aaPredicted RBP14.69□□□□□ -0.06
C11orf54-201ENST00000331239 MAPKBP1O60336 1514 aa14.68□□□□□ -0.06
C11orf54-201ENST00000331239 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
C11orf54-201ENST00000331239 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
C11orf54-201ENST00000331239 SUPT6HQ7KZ85 1726 aaKnown RBP14.67□□□□□ -0.06
C11orf54-201ENST00000331239 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
C11orf54-201ENST00000331239 ATP1B4Q9UN42 357 aaPredicted RBP14.66□□□□□ -0.06
C11orf54-201ENST00000331239 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
C11orf54-201ENST00000331239 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
C11orf54-201ENST00000331239 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
C11orf54-201ENST00000331239 KIF14Q15058 1648 aa14.62□□□□□ -0.07
C11orf54-201ENST00000331239 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
C11orf54-201ENST00000331239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
C11orf54-201ENST00000331239 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
C11orf54-201ENST00000331239 ASXL2Q76L83 1435 aa14.6□□□□□ -0.07
C11orf54-201ENST00000331239 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
C11orf54-201ENST00000331239 ARAP3Q8WWN8 1544 aa14.59□□□□□ -0.07
C11orf54-201ENST00000331239 GLI2P10070 1586 aa14.59□□□□□ -0.07
C11orf54-201ENST00000331239 NCOA2Q15596 1464 aa14.58□□□□□ -0.07
C11orf54-201ENST00000331239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.58□□□□□ -0.08
C11orf54-201ENST00000331239 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
C11orf54-201ENST00000331239 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
C11orf54-201ENST00000331239 MIA2Q96PC5 1412 aa14.57□□□□□ -0.08
C11orf54-201ENST00000331239 ABCA9Q8IUA7 1624 aa14.56□□□□□ -0.08
C11orf54-201ENST00000331239 TRIM26Q12899 539 aaPredicted RBP14.56□□□□□ -0.08
C11orf54-201ENST00000331239 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
C11orf54-201ENST00000331239 RRBP1Q9P2E9 1410 aaKnown RBP14.53□□□□□ -0.08
C11orf54-201ENST00000331239 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
C11orf54-201ENST00000331239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.08
C11orf54-201ENST00000331239 MYO5CQ9NQX4 1742 aa14.51□□□□□ -0.09
C11orf54-201ENST00000331239 PREX2Q70Z35 1606 aa14.5□□□□□ -0.09
C11orf54-201ENST00000331239 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
C11orf54-201ENST00000331239 CDC42BPAQ5VT25 1732 aa14.5□□□□□ -0.09
C11orf54-201ENST00000331239 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
C11orf54-201ENST00000331239 PLCH2O75038 1416 aa14.49□□□□□ -0.09
C11orf54-201ENST00000331239 ARID3CA6NKF2 412 aa14.49□□□□□ -0.09
C11orf54-201ENST00000331239 PHLDB1Q86UU1 1377 aa14.49□□□□□ -0.09
C11orf54-201ENST00000331239 CFAP74Q9C0B2 1584 aa14.48□□□□□ -0.09
C11orf54-201ENST00000331239 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
C11orf54-201ENST00000331239 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms