RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 JPH4Q96JJ6 628 aa31.64■■■□□ 2.66
MRPL54-201ENST00000330133 EEA1Q15075 1411 aa31.62■■■□□ 2.65
MRPL54-201ENST00000330133 KIAA0586Q9BVV6 1533 aa31.61■■■□□ 2.65
MRPL54-201ENST00000330133 ARAP1Q96P48 1450 aa31.58■■■□□ 2.65
MRPL54-201ENST00000330133 FAM9AQ8IZU1 332 aaPredicted RBP31.56■■■□□ 2.64
MRPL54-201ENST00000330133 PRXQ9BXM0 1461 aa31.54■■■□□ 2.64
MRPL54-201ENST00000330133 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
MRPL54-201ENST00000330133 PRG4Q92954 1404 aaPredicted RBP31.52■■■□□ 2.64
MRPL54-201ENST00000330133 ERCC6L2Q5T890 1561 aa31.47■■■□□ 2.63
MRPL54-201ENST00000330133 IQGAP2Q13576 1575 aa31.39■■■□□ 2.61
MRPL54-201ENST00000330133 CARMIL2Q6F5E8 1435 aa31.32■■■□□ 2.6
MRPL54-201ENST00000330133 UGGT2Q9NYU1 1516 aa31.24■■■□□ 2.59
MRPL54-201ENST00000330133 CTTNBP2Q8WZ74 1663 aa31.22■■■□□ 2.59
MRPL54-201ENST00000330133 TNIKQ9UKE5 1360 aa31.2■■■□□ 2.59
MRPL54-201ENST00000330133 KIF21BO75037 1637 aa31.2■■■□□ 2.58
MRPL54-201ENST00000330133 PTPRGP23470 1445 aa31.19■■■□□ 2.58
MRPL54-201ENST00000330133 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
MRPL54-201ENST00000330133 DISP1Q96F81 1524 aa31.17■■■□□ 2.58
MRPL54-201ENST00000330133 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
MRPL54-201ENST00000330133 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
MRPL54-201ENST00000330133 UBTFP17480 764 aaKnown RBP31.12■■■□□ 2.57
MRPL54-201ENST00000330133 KIAA0556O60303 1618 aa31.07■■■□□ 2.56
MRPL54-201ENST00000330133 NPM1P06748 294 aaKnown RBP eCLIP31.06■■■□□ 2.56
MRPL54-201ENST00000330133 RANGAP1P46060 587 aaPredicted RBP31.03■■■□□ 2.56
MRPL54-201ENST00000330133 TRHP20396 242 aaPredicted RBP31.01■■■□□ 2.55
MRPL54-201ENST00000330133 P3H3Q8IVL6 736 aa31■■■□□ 2.55
MRPL54-201ENST00000330133 UACAQ9BZF9 1416 aa30.95■■■□□ 2.54
MRPL54-201ENST00000330133 ADCY10Q96PN6 1610 aa30.93■■■□□ 2.54
MRPL54-201ENST00000330133 UHRF1BP1LA0JNW5 1464 aa30.89■■■□□ 2.53
MRPL54-201ENST00000330133 SAMD9Q5K651 1589 aa30.87■■■□□ 2.53
MRPL54-201ENST00000330133 ABCC2Q92887 1545 aa30.83■■■□□ 2.53
MRPL54-201ENST00000330133 PLB1Q6P1J6 1458 aa30.81■■■□□ 2.52
MRPL54-201ENST00000330133 EFCAB5A4FU69 1503 aa30.8■■■□□ 2.52
MRPL54-201ENST00000330133 FHOD3Q2V2M9 1422 aa30.78■■■□□ 2.52
MRPL54-201ENST00000330133 MAPKBP1O60336 1514 aa30.75■■■□□ 2.51
MRPL54-201ENST00000330133 ABCA8O94911 1581 aa30.75■■■□□ 2.51
MRPL54-201ENST00000330133 KDM5BQ9UGL1 1544 aa30.73■■■□□ 2.51
MRPL54-201ENST00000330133 FAM69CQ0P6D2 419 aa30.67■■■□□ 2.5
MRPL54-201ENST00000330133 ARHGAP35Q9NRY4 1499 aa30.66■■■□□ 2.5
MRPL54-201ENST00000330133 ASXL2Q76L83 1435 aa30.65■■■□□ 2.5
MRPL54-201ENST00000330133 ABCC10Q5T3U5 1492 aa30.64■■■□□ 2.5
MRPL54-201ENST00000330133 ARID3CA6NKF2 412 aa30.62■■■□□ 2.49
MRPL54-201ENST00000330133 ZCCHC11Q5TAX3 1644 aaKnown RBP30.61■■■□□ 2.49
MRPL54-201ENST00000330133 RAPGEF6Q8TEU7 1601 aa30.59■■■□□ 2.49
MRPL54-201ENST00000330133 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
MRPL54-201ENST00000330133 FMN1Q68DA7 1419 aa30.57■■■□□ 2.48
MRPL54-201ENST00000330133 CLIP1P30622 1438 aa30.56■■■□□ 2.48
MRPL54-201ENST00000330133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.55■■■□□ 2.48
MRPL54-201ENST00000330133 HNRNPUL2Q1KMD3 747 aaKnown RBP30.55■■■□□ 2.48
MRPL54-201ENST00000330133 ATP10BO94823 1461 aa30.55■■■□□ 2.48
MRPL54-201ENST00000330133 DIP2BQ9P265 1576 aa30.53■■■□□ 2.48
MRPL54-201ENST00000330133 ATP1B4Q9UN42 357 aaPredicted RBP30.51■■■□□ 2.47
MRPL54-201ENST00000330133 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
MRPL54-201ENST00000330133 WDR7Q9Y4E6 1490 aa30.5■■■□□ 2.47
MRPL54-201ENST00000330133 KIF13AQ9H1H9 1805 aa30.49■■■□□ 2.47
MRPL54-201ENST00000330133 KCNH8Q96L42 1107 aa30.46■■■□□ 2.47
MRPL54-201ENST00000330133 EPRSP07814 1512 aaKnown RBP30.46■■■□□ 2.47
MRPL54-201ENST00000330133 GLI2P10070 1586 aa30.41■■■□□ 2.46
MRPL54-201ENST00000330133 CEP162Q5TB80 1403 aa30.41■■■□□ 2.46
MRPL54-201ENST00000330133 PLEKHD1A6NEE1 506 aa30.39■■■□□ 2.46
MRPL54-201ENST00000330133 HECW1Q76N89 1606 aa30.35■■■□□ 2.45
MRPL54-201ENST00000330133 CASKIN1Q8WXD9 1431 aa30.32■■■□□ 2.44
MRPL54-201ENST00000330133 CDK11AQ9UQ88 783 aaPredicted RBP30.3■■■□□ 2.44
MRPL54-201ENST00000330133 CDK13Q14004 1512 aaKnown RBP30.29■■■□□ 2.44
MRPL54-201ENST00000330133 CD109Q6YHK3 1445 aa30.25■■■□□ 2.43
MRPL54-201ENST00000330133 TSPOAP1O95153 1857 aa30.25■■■□□ 2.43
MRPL54-201ENST00000330133 PCF11O94913 1555 aaKnown RBP30.24■■■□□ 2.43
MRPL54-201ENST00000330133 FYCO1Q9BQS8 1478 aa30.23■■■□□ 2.43
MRPL54-201ENST00000330133 MAP3K4Q9Y6R4 1608 aa30.22■■■□□ 2.43
MRPL54-201ENST00000330133 TEX14Q8IWB6 1497 aa30.19■■■□□ 2.42
MRPL54-201ENST00000330133 CCDC18Q5T9S5 1454 aa30.19■■■□□ 2.42
MRPL54-201ENST00000330133 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
MRPL54-201ENST00000330133 MAGI3Q5TCQ9 1506 aa30.14■■■□□ 2.42
MRPL54-201ENST00000330133 PPRC1Q5VV67 1664 aaKnown RBP30.13■■■□□ 2.41
MRPL54-201ENST00000330133 ABCA9Q8IUA7 1624 aa30.12■■■□□ 2.41
MRPL54-201ENST00000330133 TROQ12816 1431 aaPredicted RBP30.1■■■□□ 2.41
MRPL54-201ENST00000330133 LRRIQ1Q96JM4 1722 aa30.07■■■□□ 2.4
MRPL54-201ENST00000330133 KDM6BO15054 1643 aa30.05■■■□□ 2.4
MRPL54-201ENST00000330133 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
MRPL54-201ENST00000330133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.04■■■□□ 2.4
MRPL54-201ENST00000330133 PHLDB1Q86UU1 1377 aa29.99■■■□□ 2.39
MRPL54-201ENST00000330133 KIF14Q15058 1648 aa29.97■■■□□ 2.39
MRPL54-201ENST00000330133 TTC37Q6PGP7 1564 aa29.95■■■□□ 2.39
MRPL54-201ENST00000330133 COL17A1Q9UMD9 1497 aaPredicted RBP29.95■■■□□ 2.39
MRPL54-201ENST00000330133 NEO1Q92859 1461 aa29.94■■■□□ 2.38
MRPL54-201ENST00000330133 MTUS2Q5JR59 1369 aa29.94■■■□□ 2.38
MRPL54-201ENST00000330133 PLCH2O75038 1416 aa29.93■■■□□ 2.38
MRPL54-201ENST00000330133 FANCAO15360 1455 aa29.89■■■□□ 2.38
MRPL54-201ENST00000330133 EFCAB2Q5VUJ9 269 aa29.89■■■□□ 2.38
MRPL54-201ENST00000330133 ARAP3Q8WWN8 1544 aa29.88■■■□□ 2.37
MRPL54-201ENST00000330133 AKNAQ7Z591 1439 aa29.86■■■□□ 2.37
MRPL54-201ENST00000330133 APLP2Q06481 763 aa29.84■■■□□ 2.37
MRPL54-201ENST00000330133 CFAP74Q9C0B2 1584 aa29.82■■■□□ 2.36
MRPL54-201ENST00000330133 RAPGEF3O95398 923 aa29.8■■■□□ 2.36
MRPL54-201ENST00000330133 EHBP1L1Q8N3D4 1523 aa29.8■■■□□ 2.36
MRPL54-201ENST00000330133 MYO5CQ9NQX4 1742 aa29.79■■■□□ 2.36
MRPL54-201ENST00000330133 TIAM1Q13009 1591 aa29.79■■■□□ 2.36
MRPL54-201ENST00000330133 ARHGAP5Q13017 1502 aa29.78■■■□□ 2.36
MRPL54-201ENST00000330133 DENND4BO75064 1496 aaPredicted RBP29.76■■■□□ 2.35
MRPL54-201ENST00000330133 CCNB3Q8WWL7 1395 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms