RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 NISCHQ9Y2I1 1504 aa45.64■■■■■ 4.9
MRPL54-201ENST00000330133 CCDC180Q9P1Z9 1646 aa40.45■■■■■ 4.07
MRPL54-201ENST00000330133 ABCC9O60706 1549 aa39.63■■■■□ 3.93
MRPL54-201ENST00000330133 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
MRPL54-201ENST00000330133 RB1CC1Q8TDY2 1594 aa38.12■■■■□ 3.69
MRPL54-201ENST00000330133 NACADO15069 1562 aa38.1■■■■□ 3.69
MRPL54-201ENST00000330133 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
MRPL54-201ENST00000330133 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
MRPL54-201ENST00000330133 DCAF1Q9Y4B6 1507 aa37.75■■■■□ 3.63
MRPL54-201ENST00000330133 PABPN1Q86U42 306 aaKnown RBP eCLIP37.12■■■■□ 3.53
MRPL54-201ENST00000330133 UNC13AQ9UPW8 1703 aa37.09■■■■□ 3.53
MRPL54-201ENST00000330133 SCRIBQ14160 1630 aa36.97■■■■□ 3.51
MRPL54-201ENST00000330133 BICRAQ9NZM4 1560 aa36.9■■■■□ 3.5
MRPL54-201ENST00000330133 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
MRPL54-201ENST00000330133 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
MRPL54-201ENST00000330133 EIF4G1Q04637 1599 aaKnown RBP35.95■■■■□ 3.35
MRPL54-201ENST00000330133 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
MRPL54-201ENST00000330133 CECR2Q9BXF3 1484 aa35.6■■■■□ 3.29
MRPL54-201ENST00000330133 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
MRPL54-201ENST00000330133 SMARCA4P51532 1647 aa35.35■■■■□ 3.25
MRPL54-201ENST00000330133 ATAD2BQ9ULI0 1458 aa35.21■■■■□ 3.23
MRPL54-201ENST00000330133 NCAPD3P42695 1498 aa35.18■■■■□ 3.22
MRPL54-201ENST00000330133 MROH2BQ7Z745 1585 aa35.17■■■■□ 3.22
MRPL54-201ENST00000330133 SMARCA2P51531 1590 aa35.15■■■■□ 3.22
MRPL54-201ENST00000330133 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
MRPL54-201ENST00000330133 HMGXB3Q12766 1538 aa34.96■■■■□ 3.19
MRPL54-201ENST00000330133 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
MRPL54-201ENST00000330133 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
MRPL54-201ENST00000330133 WIZO95785 1651 aa34.76■■■■□ 3.15
MRPL54-201ENST00000330133 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
MRPL54-201ENST00000330133 NESP48681 1621 aa34.28■■■■□ 3.08
MRPL54-201ENST00000330133 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.07
MRPL54-201ENST00000330133 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
MRPL54-201ENST00000330133 ERCC6Q03468 1493 aa34.18■■■■□ 3.06
MRPL54-201ENST00000330133 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
MRPL54-201ENST00000330133 CCDC88BA6NC98 1476 aa34.07■■■■□ 3.04
MRPL54-201ENST00000330133 PDS5BQ9NTI5 1447 aa34.05■■■■□ 3.04
MRPL54-201ENST00000330133 CFTRP13569 1480 aa33.96■■■■□ 3.03
MRPL54-201ENST00000330133 KIF21AQ7Z4S6 1674 aa33.79■■■■□ 3
MRPL54-201ENST00000330133 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
MRPL54-201ENST00000330133 CUX2O14529 1486 aa33.76■■■□□ 2.99
MRPL54-201ENST00000330133 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
MRPL54-201ENST00000330133 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
MRPL54-201ENST00000330133 MRC2Q9UBG0 1479 aa33.65■■■□□ 2.98
MRPL54-201ENST00000330133 PRDM2Q13029 1718 aa33.55■■■□□ 2.96
MRPL54-201ENST00000330133 WDR62O43379 1518 aa33.48■■■□□ 2.95
MRPL54-201ENST00000330133 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
MRPL54-201ENST00000330133 ABCC8Q09428 1581 aa33.26■■■□□ 2.92
MRPL54-201ENST00000330133 TOPBP1Q92547 1522 aa33.22■■■□□ 2.91
MRPL54-201ENST00000330133 DNMBPQ6XZF7 1577 aa33.17■■■□□ 2.9
MRPL54-201ENST00000330133 IFT140Q96RY7 1462 aa33.02■■■□□ 2.88
MRPL54-201ENST00000330133 CUX1P39880 1505 aa32.98■■■□□ 2.87
MRPL54-201ENST00000330133 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
MRPL54-201ENST00000330133 FGD5Q6ZNL6 1462 aa32.88■■■□□ 2.85
MRPL54-201ENST00000330133 SOGA1O94964 1423 aa32.88■■■□□ 2.85
MRPL54-201ENST00000330133 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
MRPL54-201ENST00000330133 ZNF608Q9ULD9 1512 aaPredicted RBP32.83■■■□□ 2.85
MRPL54-201ENST00000330133 RAD54L2Q9Y4B4 1467 aa32.82■■■□□ 2.84
MRPL54-201ENST00000330133 TARBP1Q13395 1621 aaKnown RBP32.79■■■□□ 2.84
MRPL54-201ENST00000330133 TOP2BQ02880 1626 aa32.7■■■□□ 2.83
MRPL54-201ENST00000330133 AQRO60306 1485 aaKnown RBP eCLIP32.7■■■□□ 2.83
MRPL54-201ENST00000330133 DNAJC5Q9H3Z4 198 aa32.69■■■□□ 2.82
MRPL54-201ENST00000330133 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
MRPL54-201ENST00000330133 TDRD9Q8NDG6 1382 aaKnown RBP32.68■■■□□ 2.82
MRPL54-201ENST00000330133 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
MRPL54-201ENST00000330133 EIF4G3O43432 1585 aaKnown RBP32.65■■■□□ 2.82
MRPL54-201ENST00000330133 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
MRPL54-201ENST00000330133 WDR97A6NE52 1622 aa32.55■■■□□ 2.8
MRPL54-201ENST00000330133 OSCARQ8IYS5 282 aa32.47■■■□□ 2.79
MRPL54-201ENST00000330133 GAPVD1Q14C86 1478 aa32.47■■■□□ 2.79
MRPL54-201ENST00000330133 GRIN2BQ13224 1484 aa32.45■■■□□ 2.79
MRPL54-201ENST00000330133 FBLN2P98095 1184 aa32.39■■■□□ 2.78
MRPL54-201ENST00000330133 SNAPC4Q5SXM2 1469 aa32.37■■■□□ 2.77
MRPL54-201ENST00000330133 ABCA5Q8WWZ7 1642 aa32.36■■■□□ 2.77
MRPL54-201ENST00000330133 MAGI1Q96QZ7 1491 aaPredicted RBP32.33■■■□□ 2.77
MRPL54-201ENST00000330133 CHMP7Q8WUX9 453 aaPredicted RBP32.3■■■□□ 2.76
MRPL54-201ENST00000330133 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
MRPL54-201ENST00000330133 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
MRPL54-201ENST00000330133 SYNJ2O15056 1496 aa32.22■■■□□ 2.75
MRPL54-201ENST00000330133 CHD1O14646 1710 aa32.19■■■□□ 2.74
MRPL54-201ENST00000330133 KIF27Q86VH2 1401 aa32.18■■■□□ 2.74
MRPL54-201ENST00000330133 ERICH3Q5RHP9 1530 aa32.17■■■□□ 2.74
MRPL54-201ENST00000330133 FHAD1B1AJZ9 1412 aa32.11■■■□□ 2.73
MRPL54-201ENST00000330133 ADAMTS12P58397 1594 aa32.07■■■□□ 2.72
MRPL54-201ENST00000330133 IGF1RP08069 1367 aa32.06■■■□□ 2.72
MRPL54-201ENST00000330133 GRIN2AQ12879 1464 aa32■■■□□ 2.71
MRPL54-201ENST00000330133 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
MRPL54-201ENST00000330133 CARMIL1Q5VZK9 1371 aa31.88■■■□□ 2.69
MRPL54-201ENST00000330133 RUSC2Q8N2Y8 1516 aa31.87■■■□□ 2.69
MRPL54-201ENST00000330133 CHIC1Q5VXU3 224 aa31.87■■■□□ 2.69
MRPL54-201ENST00000330133 NUP160Q12769 1436 aa31.86■■■□□ 2.69
MRPL54-201ENST00000330133 CUL7Q14999 1698 aa31.86■■■□□ 2.69
MRPL54-201ENST00000330133 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
MRPL54-201ENST00000330133 CEP170Q5SW79 1584 aa31.8■■■□□ 2.68
MRPL54-201ENST00000330133 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
MRPL54-201ENST00000330133 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
MRPL54-201ENST00000330133 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
MRPL54-201ENST00000330133 RAPGEF2Q9Y4G8 1499 aa31.67■■■□□ 2.66
MRPL54-201ENST00000330133 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
MRPL54-201ENST00000330133 CSRNP3Q8WYN3 585 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms