RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 CHMP7Q8WUX9 453 aaPredicted RBP7.91□□□□□ -1.14
PDE4B-201ENST00000329654 PBRM1Q86U86 1689 aa7.9□□□□□ -1.15
PDE4B-201ENST00000329654 UBE2Q2Q8WVN8 375 aa7.89□□□□□ -1.15
PDE4B-201ENST00000329654 IGF1RP08069 1367 aa7.89□□□□□ -1.15
PDE4B-201ENST00000329654 TNIKQ9UKE5 1360 aa7.89□□□□□ -1.15
PDE4B-201ENST00000329654 RAPGEF2Q9Y4G8 1499 aa7.87□□□□□ -1.15
PDE4B-201ENST00000329654 GAPVD1Q14C86 1478 aa7.86□□□□□ -1.15
PDE4B-201ENST00000329654 ANP32EQ9BTT0 268 aa7.86□□□□□ -1.15
PDE4B-201ENST00000329654 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
PDE4B-201ENST00000329654 TRIM26Q12899 539 aaPredicted RBP7.84□□□□□ -1.15
PDE4B-201ENST00000329654 ADAMTS12P58397 1594 aa7.83□□□□□ -1.16
PDE4B-201ENST00000329654 CARMIL1Q5VZK9 1371 aa7.83□□□□□ -1.16
PDE4B-201ENST00000329654 CTTNBP2Q8WZ74 1663 aa7.83□□□□□ -1.16
PDE4B-201ENST00000329654 GRIN2BQ13224 1484 aa7.82□□□□□ -1.16
PDE4B-201ENST00000329654 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
PDE4B-201ENST00000329654 PODXL2Q9NZ53 605 aa7.81□□□□□ -1.16
PDE4B-201ENST00000329654 TDRD9Q8NDG6 1382 aaKnown RBP7.81□□□□□ -1.16
PDE4B-201ENST00000329654 CEP162Q5TB80 1403 aa7.81□□□□□ -1.16
PDE4B-201ENST00000329654 FHAD1B1AJZ9 1412 aa7.8□□□□□ -1.16
PDE4B-201ENST00000329654 ARXQ96QS3 562 aa7.79□□□□□ -1.16
PDE4B-201ENST00000329654 AQRO60306 1485 aaKnown RBP eCLIP7.79□□□□□ -1.16
PDE4B-201ENST00000329654 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
PDE4B-201ENST00000329654 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
PDE4B-201ENST00000329654 TRHP20396 242 aaPredicted RBP7.78□□□□□ -1.16
PDE4B-201ENST00000329654 CYB5RLQ6IPT4 315 aa7.78□□□□□ -1.16
PDE4B-201ENST00000329654 NPM1P06748 294 aaKnown RBP eCLIP7.77□□□□□ -1.17
PDE4B-201ENST00000329654 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
PDE4B-201ENST00000329654 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
PDE4B-201ENST00000329654 CLIP1P30622 1438 aa7.75□□□□□ -1.17
PDE4B-201ENST00000329654 EFCAB5A4FU69 1503 aa7.75□□□□□ -1.17
PDE4B-201ENST00000329654 RANGAP1P46060 587 aaPredicted RBP7.75□□□□□ -1.17
PDE4B-201ENST00000329654 SAMD9Q5K651 1589 aa7.74□□□□□ -1.17
PDE4B-201ENST00000329654 SYNJ2O15056 1496 aa7.74□□□□□ -1.17
PDE4B-201ENST00000329654 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
PDE4B-201ENST00000329654 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
PDE4B-201ENST00000329654 ARHGAP35Q9NRY4 1499 aa7.73□□□□□ -1.17
PDE4B-201ENST00000329654 ZEB1P37275 1124 aaPredicted RBP7.73□□□□□ -1.17
PDE4B-201ENST00000329654 ANO8Q9HCE9 1232 aaPredicted RBP7.73□□□□□ -1.17
PDE4B-201ENST00000329654 IQGAP2Q13576 1575 aa7.71□□□□□ -1.17
PDE4B-201ENST00000329654 VPS8Q8N3P4 1428 aa7.71□□□□□ -1.17
PDE4B-201ENST00000329654 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
PDE4B-201ENST00000329654 NUP160Q12769 1436 aa7.71□□□□□ -1.18
PDE4B-201ENST00000329654 UGGT2Q9NYU1 1516 aa7.7□□□□□ -1.18
PDE4B-201ENST00000329654 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
PDE4B-201ENST00000329654 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
PDE4B-201ENST00000329654 PKNOX2Q96KN3 472 aa7.7□□□□□ -1.18
PDE4B-201ENST00000329654 CHD1O14646 1710 aa7.69□□□□□ -1.18
PDE4B-201ENST00000329654 KLHL34Q8N239 644 aa7.69□□□□□ -1.18
PDE4B-201ENST00000329654 MAP3K1Q13233 1512 aa7.67□□□□□ -1.18
PDE4B-201ENST00000329654 NEUROD1Q13562 356 aa7.66□□□□□ -1.18
PDE4B-201ENST00000329654 SHROOM2Q13796 1616 aa7.66□□□□□ -1.18
PDE4B-201ENST00000329654 KIAA0556O60303 1618 aa7.65□□□□□ -1.19
PDE4B-201ENST00000329654 RTN4Q9NQC3 1192 aaKnown RBP7.64□□□□□ -1.19
PDE4B-201ENST00000329654 PLPPR3Q6T4P5 718 aa7.64□□□□□ -1.19
PDE4B-201ENST00000329654 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
PDE4B-201ENST00000329654 CFAP43Q8NDM7 1665 aa7.64□□□□□ -1.19
PDE4B-201ENST00000329654 DISP1Q96F81 1524 aa7.64□□□□□ -1.19
PDE4B-201ENST00000329654 CCER1Q8TC90 406 aaPredicted RBP7.64□□□□□ -1.19
PDE4B-201ENST00000329654 CLASP1Q7Z460 1538 aa7.63□□□□□ -1.19
PDE4B-201ENST00000329654 FYCO1Q9BQS8 1478 aa7.63□□□□□ -1.19
PDE4B-201ENST00000329654 PCF11O94913 1555 aaKnown RBP7.63□□□□□ -1.19
PDE4B-201ENST00000329654 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
PDE4B-201ENST00000329654 FMN1Q68DA7 1419 aa7.62□□□□□ -1.19
PDE4B-201ENST00000329654 CASKIN1Q8WXD9 1431 aa7.62□□□□□ -1.19
PDE4B-201ENST00000329654 LRRIQ1Q96JM4 1722 aa7.62□□□□□ -1.19
PDE4B-201ENST00000329654 ARHGEF11O15085 1522 aa7.61□□□□□ -1.19
PDE4B-201ENST00000329654 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
PDE4B-201ENST00000329654 TIAM1Q13009 1591 aa7.61□□□□□ -1.19
PDE4B-201ENST00000329654 FHOD3Q2V2M9 1422 aa7.61□□□□□ -1.19
PDE4B-201ENST00000329654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.61□□□□□ -1.19
PDE4B-201ENST00000329654 HECW1Q76N89 1606 aa7.58□□□□□ -1.2
PDE4B-201ENST00000329654 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
PDE4B-201ENST00000329654 NEFLP07196 543 aa7.57□□□□□ -1.2
PDE4B-201ENST00000329654 RAPGEF6Q8TEU7 1601 aa7.57□□□□□ -1.2
PDE4B-201ENST00000329654 CCDC18Q5T9S5 1454 aa7.56□□□□□ -1.2
PDE4B-201ENST00000329654 PRG4Q92954 1404 aaPredicted RBP7.55□□□□□ -1.2
PDE4B-201ENST00000329654 ABCA8O94911 1581 aa7.55□□□□□ -1.2
PDE4B-201ENST00000329654 ADRA2BP18089 450 aa7.55□□□□□ -1.2
PDE4B-201ENST00000329654 HNRNPUL2Q1KMD3 747 aaKnown RBP7.55□□□□□ -1.2
PDE4B-201ENST00000329654 LRRC9Q6ZRR7 1453 aa7.55□□□□□ -1.2
PDE4B-201ENST00000329654 RIMBP3CA6NJZ7 1639 aa7.54□□□□□ -1.2
PDE4B-201ENST00000329654 RIMBP3BA6NNM3 1639 aa7.54□□□□□ -1.2
PDE4B-201ENST00000329654 RIMBP3Q9UFD9 1639 aa7.54□□□□□ -1.2
PDE4B-201ENST00000329654 PTPRGP23470 1445 aa7.54□□□□□ -1.2
PDE4B-201ENST00000329654 PDE4CQ08493 712 aa7.53□□□□□ -1.2
PDE4B-201ENST00000329654 ERICH6BQ5W0A0 696 aa7.53□□□□□ -1.2
PDE4B-201ENST00000329654 EPRSP07814 1512 aaKnown RBP7.52□□□□□ -1.21
PDE4B-201ENST00000329654 NUP153P49790 1475 aaKnown RBP7.52□□□□□ -1.21
PDE4B-201ENST00000329654 EHBP1L1Q8N3D4 1523 aa7.52□□□□□ -1.21
PDE4B-201ENST00000329654 FAM69CQ0P6D2 419 aa7.52□□□□□ -1.21
PDE4B-201ENST00000329654 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
PDE4B-201ENST00000329654 SALL2Q9Y467 1007 aaPredicted RBP7.52□□□□□ -1.21
PDE4B-201ENST00000329654 ADCY10Q96PN6 1610 aa7.5□□□□□ -1.21
PDE4B-201ENST00000329654 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
PDE4B-201ENST00000329654 ERCC6L2Q5T890 1561 aa7.5□□□□□ -1.21
PDE4B-201ENST00000329654 KANK4Q5T7N3 995 aaPredicted RBP7.5□□□□□ -1.21
PDE4B-201ENST00000329654 HOMEZQ8IX15 550 aa7.5□□□□□ -1.21
PDE4B-201ENST00000329654 SUPT6HQ7KZ85 1726 aaKnown RBP7.5□□□□□ -1.21
PDE4B-201ENST00000329654 MAGI3Q5TCQ9 1506 aa7.5□□□□□ -1.21
PDE4B-201ENST00000329654 UHRF1BP1LA0JNW5 1464 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms