RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 NISCHQ9Y2I1 1504 aa11.27□□□□□ -0.61
PDE4B-201ENST00000329654 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
PDE4B-201ENST00000329654 ABCC9O60706 1549 aa9.49□□□□□ -0.89
PDE4B-201ENST00000329654 ZCCHC6Q5VYS8 1495 aaKnown RBP9.48□□□□□ -0.89
PDE4B-201ENST00000329654 DCAF1Q9Y4B6 1507 aa9.41□□□□□ -0.9
PDE4B-201ENST00000329654 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
PDE4B-201ENST00000329654 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
PDE4B-201ENST00000329654 MYO15BQ96JP2 1530 aa9.33□□□□□ -0.92
PDE4B-201ENST00000329654 MYT1Q01538 1121 aa9.32□□□□□ -0.92
PDE4B-201ENST00000329654 NACADO15069 1562 aa9.22□□□□□ -0.93
PDE4B-201ENST00000329654 AEBP2Q6ZN18 517 aaPredicted RBP9.14□□□□□ -0.95
PDE4B-201ENST00000329654 RB1CC1Q8TDY2 1594 aa9.12□□□□□ -0.95
PDE4B-201ENST00000329654 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
PDE4B-201ENST00000329654 CHIC1Q5VXU3 224 aa9.06□□□□□ -0.96
PDE4B-201ENST00000329654 UNC13AQ9UPW8 1703 aa8.99□□□□□ -0.97
PDE4B-201ENST00000329654 SCRIBQ14160 1630 aa8.98□□□□□ -0.97
PDE4B-201ENST00000329654 SLC24A1O60721 1099 aa8.96□□□□□ -0.98
PDE4B-201ENST00000329654 SHROOM4Q9ULL8 1493 aa8.95□□□□□ -0.98
PDE4B-201ENST00000329654 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDE4B-201ENST00000329654 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
PDE4B-201ENST00000329654 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
PDE4B-201ENST00000329654 APLP2Q06481 763 aa8.71□□□□□ -1.02
PDE4B-201ENST00000329654 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.02
PDE4B-201ENST00000329654 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
PDE4B-201ENST00000329654 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
PDE4B-201ENST00000329654 RSF1Q96T23 1441 aaPredicted RBP8.69□□□□□ -1.02
PDE4B-201ENST00000329654 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
PDE4B-201ENST00000329654 DNAJC5BQ9UF47 199 aa8.67□□□□□ -1.02
PDE4B-201ENST00000329654 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
PDE4B-201ENST00000329654 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.03
PDE4B-201ENST00000329654 WIZO95785 1651 aa8.6□□□□□ -1.03
PDE4B-201ENST00000329654 SUPT5HO00267 1087 aaKnown RBP8.57□□□□□ -1.04
PDE4B-201ENST00000329654 EIF4G1Q04637 1599 aaKnown RBP8.57□□□□□ -1.04
PDE4B-201ENST00000329654 TOP2AP11388 1531 aaKnown RBP8.55□□□□□ -1.04
PDE4B-201ENST00000329654 SMARCA2P51531 1590 aa8.54□□□□□ -1.04
PDE4B-201ENST00000329654 ATAD2BQ9ULI0 1458 aa8.52□□□□□ -1.05
PDE4B-201ENST00000329654 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
PDE4B-201ENST00000329654 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
PDE4B-201ENST00000329654 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
PDE4B-201ENST00000329654 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
PDE4B-201ENST00000329654 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
PDE4B-201ENST00000329654 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
PDE4B-201ENST00000329654 BCL11AQ9H165 835 aa8.4□□□□□ -1.06
PDE4B-201ENST00000329654 ERCC6Q03468 1493 aa8.34□□□□□ -1.07
PDE4B-201ENST00000329654 PRDM2Q13029 1718 aa8.33□□□□□ -1.08
PDE4B-201ENST00000329654 CFTRP13569 1480 aa8.27□□□□□ -1.09
PDE4B-201ENST00000329654 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
PDE4B-201ENST00000329654 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
PDE4B-201ENST00000329654 PHF23Q9BUL5 403 aaPredicted RBP8.24□□□□□ -1.09
PDE4B-201ENST00000329654 HRCP23327 699 aa8.23□□□□□ -1.09
PDE4B-201ENST00000329654 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
PDE4B-201ENST00000329654 CADPSQ9ULU8 1353 aa8.21□□□□□ -1.09
PDE4B-201ENST00000329654 SCAF1Q9H7N4 1312 aaKnown RBP8.21□□□□□ -1.1
PDE4B-201ENST00000329654 BIVM-ERCC5R4GMW8 1640 aa8.19□□□□□ -1.1
PDE4B-201ENST00000329654 ABCC8Q09428 1581 aa8.19□□□□□ -1.1
PDE4B-201ENST00000329654 TOP2BQ02880 1626 aa8.17□□□□□ -1.1
PDE4B-201ENST00000329654 EIF5BO60841 1220 aaKnown RBP8.17□□□□□ -1.1
PDE4B-201ENST00000329654 SYNJ1O43426 1573 aa8.16□□□□□ -1.1
PDE4B-201ENST00000329654 CUX2O14529 1486 aa8.16□□□□□ -1.1
PDE4B-201ENST00000329654 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
PDE4B-201ENST00000329654 PCGF6Q9BYE7 350 aa8.14□□□□□ -1.11
PDE4B-201ENST00000329654 TRIM41Q8WV44 630 aa8.12□□□□□ -1.11
PDE4B-201ENST00000329654 CUX1P39880 1505 aa8.12□□□□□ -1.11
PDE4B-201ENST00000329654 NESP48681 1621 aa8.11□□□□□ -1.11
PDE4B-201ENST00000329654 FANCD2Q9BXW9 1451 aa8.11□□□□□ -1.11
PDE4B-201ENST00000329654 KIF21AQ7Z4S6 1674 aa8.1□□□□□ -1.11
PDE4B-201ENST00000329654 DNMBPQ6XZF7 1577 aa8.09□□□□□ -1.11
PDE4B-201ENST00000329654 DNAJC5Q9H3Z4 198 aa8.08□□□□□ -1.12
PDE4B-201ENST00000329654 EEA1Q15075 1411 aa8.07□□□□□ -1.12
PDE4B-201ENST00000329654 CEP164Q9UPV0 1460 aa8.07□□□□□ -1.12
PDE4B-201ENST00000329654 TOPBP1Q92547 1522 aa8.04□□□□□ -1.12
PDE4B-201ENST00000329654 CENPBP07199 599 aaPredicted RBP8.04□□□□□ -1.12
PDE4B-201ENST00000329654 MRC2Q9UBG0 1479 aa8.04□□□□□ -1.12
PDE4B-201ENST00000329654 URB2Q14146 1524 aaKnown RBP8.03□□□□□ -1.12
PDE4B-201ENST00000329654 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
PDE4B-201ENST00000329654 FGD5Q6ZNL6 1462 aa8.01□□□□□ -1.13
PDE4B-201ENST00000329654 WDR62O43379 1518 aa8.01□□□□□ -1.13
PDE4B-201ENST00000329654 SOGA1O94964 1423 aa8.01□□□□□ -1.13
PDE4B-201ENST00000329654 THOC2Q8NI27 1593 aaKnown RBP8□□□□□ -1.13
PDE4B-201ENST00000329654 PPARGC1BQ86YN6 1023 aaKnown RBP8□□□□□ -1.13
PDE4B-201ENST00000329654 KIF21BO75037 1637 aa8□□□□□ -1.13
PDE4B-201ENST00000329654 OSCARQ8IYS5 282 aa7.99□□□□□ -1.13
PDE4B-201ENST00000329654 POLA1P09884 1462 aaPredicted RBP7.99□□□□□ -1.13
PDE4B-201ENST00000329654 RUSC2Q8N2Y8 1516 aa7.99□□□□□ -1.13
PDE4B-201ENST00000329654 ABCA10Q8WWZ4 1543 aa7.99□□□□□ -1.13
PDE4B-201ENST00000329654 TARBP1Q13395 1621 aaKnown RBP7.98□□□□□ -1.13
PDE4B-201ENST00000329654 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
PDE4B-201ENST00000329654 FBLN2P98095 1184 aa7.97□□□□□ -1.13
PDE4B-201ENST00000329654 KIF27Q86VH2 1401 aa7.96□□□□□ -1.14
PDE4B-201ENST00000329654 ABCA5Q8WWZ7 1642 aa7.96□□□□□ -1.14
PDE4B-201ENST00000329654 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
PDE4B-201ENST00000329654 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
PDE4B-201ENST00000329654 NCBP3Q53F19 620 aaKnown RBP7.94□□□□□ -1.14
PDE4B-201ENST00000329654 PRXQ9BXM0 1461 aa7.94□□□□□ -1.14
PDE4B-201ENST00000329654 CSRNP3Q8WYN3 585 aa7.94□□□□□ -1.14
PDE4B-201ENST00000329654 PLEKHG5O94827 1062 aa7.93□□□□□ -1.14
PDE4B-201ENST00000329654 RAD54L2Q9Y4B4 1467 aa7.92□□□□□ -1.14
PDE4B-201ENST00000329654 CUL7Q14999 1698 aa7.92□□□□□ -1.14
PDE4B-201ENST00000329654 GOLGA3Q08378 1498 aa7.92□□□□□ -1.14
PDE4B-201ENST00000329654 IFT140Q96RY7 1462 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms