RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 CARMIL1Q5VZK9 1371 aa27.83■■■□□ 2.05
CCDC107-201ENST00000327351 EHMT2Q96KQ7 1210 aa27.72■■■□□ 2.03
CCDC107-201ENST00000327351 CYB5RLQ6IPT4 315 aa27.71■■■□□ 2.03
CCDC107-201ENST00000327351 KIF21BO75037 1637 aa27.7■■■□□ 2.02
CCDC107-201ENST00000327351 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
CCDC107-201ENST00000327351 PRXQ9BXM0 1461 aa27.68■■■□□ 2.02
CCDC107-201ENST00000327351 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
CCDC107-201ENST00000327351 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
CCDC107-201ENST00000327351 KIAA0586Q9BVV6 1533 aa27.65■■■□□ 2.02
CCDC107-201ENST00000327351 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
CCDC107-201ENST00000327351 JPH4Q96JJ6 628 aa27.64■■■□□ 2.02
CCDC107-201ENST00000327351 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
CCDC107-201ENST00000327351 ERCC6L2Q5T890 1561 aa27.55■■■□□ 2
CCDC107-201ENST00000327351 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
CCDC107-201ENST00000327351 TNIKQ9UKE5 1360 aa27.54■■■□□ 2
CCDC107-201ENST00000327351 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
CCDC107-201ENST00000327351 CARMIL2Q6F5E8 1435 aa27.41■■□□□ 1.98
CCDC107-201ENST00000327351 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
CCDC107-201ENST00000327351 UGGT2Q9NYU1 1516 aa27.32■■□□□ 1.96
CCDC107-201ENST00000327351 CEP162Q5TB80 1403 aa27.32■■□□□ 1.96
CCDC107-201ENST00000327351 PTPRGP23470 1445 aa27.27■■□□□ 1.96
CCDC107-201ENST00000327351 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
CCDC107-201ENST00000327351 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
CCDC107-201ENST00000327351 KIAA0556O60303 1618 aa27.2■■□□□ 1.95
CCDC107-201ENST00000327351 TRHP20396 242 aaPredicted RBP27.2■■□□□ 1.94
CCDC107-201ENST00000327351 CLIP1P30622 1438 aa27.19■■□□□ 1.94
CCDC107-201ENST00000327351 NPM1P06748 294 aaKnown RBP eCLIP27.19■■□□□ 1.94
CCDC107-201ENST00000327351 RANGAP1P46060 587 aaPredicted RBP27.14■■□□□ 1.94
CCDC107-201ENST00000327351 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
CCDC107-201ENST00000327351 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
CCDC107-201ENST00000327351 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
CCDC107-201ENST00000327351 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
CCDC107-201ENST00000327351 ARHGAP35Q9NRY4 1499 aa27.02■■□□□ 1.92
CCDC107-201ENST00000327351 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
CCDC107-201ENST00000327351 ABCC2Q92887 1545 aa27.01■■□□□ 1.91
CCDC107-201ENST00000327351 MAPKBP1O60336 1514 aa26.97■■□□□ 1.91
CCDC107-201ENST00000327351 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
CCDC107-201ENST00000327351 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
CCDC107-201ENST00000327351 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
CCDC107-201ENST00000327351 ABCA8O94911 1581 aa26.9■■□□□ 1.9
CCDC107-201ENST00000327351 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
CCDC107-201ENST00000327351 FHOD3Q2V2M9 1422 aa26.88■■□□□ 1.89
CCDC107-201ENST00000327351 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
CCDC107-201ENST00000327351 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
CCDC107-201ENST00000327351 ZCCHC11Q5TAX3 1644 aaKnown RBP26.83■■□□□ 1.89
CCDC107-201ENST00000327351 ASXL2Q76L83 1435 aa26.83■■□□□ 1.89
CCDC107-201ENST00000327351 KIF13AQ9H1H9 1805 aa26.8■■□□□ 1.88
CCDC107-201ENST00000327351 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
CCDC107-201ENST00000327351 RAPGEF6Q8TEU7 1601 aa26.79■■□□□ 1.88
CCDC107-201ENST00000327351 ARID3CA6NKF2 412 aa26.72■■□□□ 1.87
CCDC107-201ENST00000327351 FMN1Q68DA7 1419 aa26.72■■□□□ 1.87
CCDC107-201ENST00000327351 WDR7Q9Y4E6 1490 aa26.7■■□□□ 1.87
CCDC107-201ENST00000327351 ATP10BO94823 1461 aa26.69■■□□□ 1.86
CCDC107-201ENST00000327351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.69■■□□□ 1.86
CCDC107-201ENST00000327351 HNRNPUL2Q1KMD3 747 aaKnown RBP26.69■■□□□ 1.86
CCDC107-201ENST00000327351 NUP153P49790 1475 aaKnown RBP26.67■■□□□ 1.86
CCDC107-201ENST00000327351 GLI2P10070 1586 aa26.67■■□□□ 1.86
CCDC107-201ENST00000327351 EPRSP07814 1512 aaKnown RBP26.66■■□□□ 1.86
CCDC107-201ENST00000327351 APLP2Q06481 763 aa26.63■■□□□ 1.85
CCDC107-201ENST00000327351 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
CCDC107-201ENST00000327351 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
CCDC107-201ENST00000327351 ATP1B4Q9UN42 357 aaPredicted RBP26.62■■□□□ 1.85
CCDC107-201ENST00000327351 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
CCDC107-201ENST00000327351 PCF11O94913 1555 aaKnown RBP26.59■■□□□ 1.85
CCDC107-201ENST00000327351 FYCO1Q9BQS8 1478 aa26.57■■□□□ 1.84
CCDC107-201ENST00000327351 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
CCDC107-201ENST00000327351 TSPOAP1O95153 1857 aa26.56■■□□□ 1.84
CCDC107-201ENST00000327351 PLEKHD1A6NEE1 506 aa26.54■■□□□ 1.84
CCDC107-201ENST00000327351 MAP3K1Q13233 1512 aa26.52■■□□□ 1.84
CCDC107-201ENST00000327351 MAP3K4Q9Y6R4 1608 aa26.52■■□□□ 1.84
CCDC107-201ENST00000327351 CDK13Q14004 1512 aaKnown RBP26.48■■□□□ 1.83
CCDC107-201ENST00000327351 TEX14Q8IWB6 1497 aa26.48■■□□□ 1.83
CCDC107-201ENST00000327351 CD109Q6YHK3 1445 aa26.48■■□□□ 1.83
CCDC107-201ENST00000327351 CFAP43Q8NDM7 1665 aa26.47■■□□□ 1.83
CCDC107-201ENST00000327351 CDK11AQ9UQ88 783 aaPredicted RBP26.47■■□□□ 1.83
CCDC107-201ENST00000327351 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
CCDC107-201ENST00000327351 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
CCDC107-201ENST00000327351 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
CCDC107-201ENST00000327351 TRIM26Q12899 539 aaPredicted RBP26.42■■□□□ 1.82
CCDC107-201ENST00000327351 MAGI3Q5TCQ9 1506 aa26.4■■□□□ 1.82
CCDC107-201ENST00000327351 KDM6BO15054 1643 aa26.4■■□□□ 1.82
CCDC107-201ENST00000327351 CCDC18Q5T9S5 1454 aa26.4■■□□□ 1.82
CCDC107-201ENST00000327351 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.82
CCDC107-201ENST00000327351 LRRIQ1Q96JM4 1722 aa26.38■■□□□ 1.81
CCDC107-201ENST00000327351 LRRC9Q6ZRR7 1453 aa26.36■■□□□ 1.81
CCDC107-201ENST00000327351 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
CCDC107-201ENST00000327351 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
CCDC107-201ENST00000327351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
CCDC107-201ENST00000327351 PHLDB1Q86UU1 1377 aa26.26■■□□□ 1.79
CCDC107-201ENST00000327351 KIF14Q15058 1648 aa26.25■■□□□ 1.79
CCDC107-201ENST00000327351 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
CCDC107-201ENST00000327351 NEO1Q92859 1461 aa26.23■■□□□ 1.79
CCDC107-201ENST00000327351 MTUS2Q5JR59 1369 aa26.22■■□□□ 1.79
CCDC107-201ENST00000327351 COL17A1Q9UMD9 1497 aaPredicted RBP26.2■■□□□ 1.78
CCDC107-201ENST00000327351 EHBP1L1Q8N3D4 1523 aa26.18■■□□□ 1.78
CCDC107-201ENST00000327351 CFAP74Q9C0B2 1584 aa26.17■■□□□ 1.78
CCDC107-201ENST00000327351 ARAP3Q8WWN8 1544 aa26.17■■□□□ 1.78
CCDC107-201ENST00000327351 FANCAO15360 1455 aa26.17■■□□□ 1.78
CCDC107-201ENST00000327351 PLCH2O75038 1416 aa26.16■■□□□ 1.78
CCDC107-201ENST00000327351 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms