RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 AQRO60306 1485 aaKnown RBP eCLIP36.1■■■■□ 3.372e-6■■■■■ 27.5
CLPTM1L-201ENST00000320895 SCAF1Q9H7N4 1312 aaKnown RBP36.09■■■■□ 3.37
CLPTM1L-201ENST00000320895 P3H3Q8IVL6 736 aa36.09■■■■□ 3.37
CLPTM1L-201ENST00000320895 ITGAEP38570 1179 aa36.08■■■■□ 3.37
CLPTM1L-201ENST00000320895 ABCA5Q8WWZ7 1642 aa36.07■■■■□ 3.37
CLPTM1L-201ENST00000320895 ZNF316A6NFI3 1004 aaPredicted RBP36.06■■■■□ 3.36
CLPTM1L-201ENST00000320895 ZNF608Q9ULD9 1512 aaPredicted RBP36.04■■■■□ 3.36
CLPTM1L-201ENST00000320895 ATP1B4Q9UN42 357 aaPredicted RBP35.95■■■■□ 3.35
CLPTM1L-201ENST00000320895 IFT140Q96RY7 1462 aa35.93■■■■□ 3.34
CLPTM1L-201ENST00000320895 CUL7Q14999 1698 aa35.89■■■■□ 3.34
CLPTM1L-201ENST00000320895 NEUROD1Q13562 356 aa35.88■■■■□ 3.33
CLPTM1L-201ENST00000320895 PBRM1Q86U86 1689 aa35.87■■■■□ 3.33
CLPTM1L-201ENST00000320895 DHX57Q6P158 1386 aaKnown RBP35.79■■■■□ 3.32
CLPTM1L-201ENST00000320895 CCNB3Q8WWL7 1395 aa35.76■■■■□ 3.32
CLPTM1L-201ENST00000320895 RRBP1Q9P2E9 1410 aaKnown RBP35.76■■■■□ 3.31
CLPTM1L-201ENST00000320895 EIF4G3O43432 1585 aaKnown RBP35.76■■■■□ 3.31
CLPTM1L-201ENST00000320895 ACIN1Q9UKV3 1341 aaKnown RBP35.75■■■■□ 3.31
CLPTM1L-201ENST00000320895 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
CLPTM1L-201ENST00000320895 YTHDC1Q96MU7 727 aaKnown RBP35.72■■■■□ 3.31
CLPTM1L-201ENST00000320895 MIER1Q8N108 512 aa35.67■■■■□ 3.3
CLPTM1L-201ENST00000320895 FHOD3Q2V2M9 1422 aa35.66■■■■□ 3.3
CLPTM1L-201ENST00000320895 SNAPC4Q5SXM2 1469 aa35.65■■■■□ 3.3
CLPTM1L-201ENST00000320895 ADAMTS12P58397 1594 aa35.64■■■■□ 3.3
CLPTM1L-201ENST00000320895 FHAD1B1AJZ9 1412 aa35.62■■■■□ 3.29
CLPTM1L-201ENST00000320895 CTTNBP2Q8WZ74 1663 aa35.61■■■■□ 3.29
CLPTM1L-201ENST00000320895 FAM50AQ14320 339 aaKnown RBP35.6■■■■□ 3.29
CLPTM1L-201ENST00000320895 TIAM1Q13009 1591 aa35.6■■■■□ 3.29
CLPTM1L-201ENST00000320895 FBLN2P98095 1184 aa35.58■■■■□ 3.29
CLPTM1L-201ENST00000320895 PHLDB1Q86UU1 1377 aa35.57■■■■□ 3.28
CLPTM1L-201ENST00000320895 LRRC9Q6ZRR7 1453 aa35.53■■■■□ 3.28
CLPTM1L-201ENST00000320895 CENPBP07199 599 aaPredicted RBP35.51■■■■□ 3.27
CLPTM1L-201ENST00000320895 PCF11O94913 1555 aaKnown RBP35.49■■■■□ 3.27
CLPTM1L-201ENST00000320895 GTF3C3Q9Y5Q9 886 aa35.47■■■■□ 3.27
CLPTM1L-201ENST00000320895 RAB3GAP2Q9H2M9 1393 aa35.46■■■■□ 3.27
CLPTM1L-201ENST00000320895 CHMP7Q8WUX9 453 aaPredicted RBP35.44■■■■□ 3.26
CLPTM1L-201ENST00000320895 CLSPNQ9HAW4 1339 aa35.42■■■■□ 3.26
CLPTM1L-201ENST00000320895 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
CLPTM1L-201ENST00000320895 MAP3K1Q13233 1512 aa35.34■■■■□ 3.25
CLPTM1L-201ENST00000320895 MAGI1Q96QZ7 1491 aaPredicted RBP35.34■■■■□ 3.25
CLPTM1L-201ENST00000320895 SYNJ2O15056 1496 aa35.29■■■■□ 3.24
CLPTM1L-201ENST00000320895 IQGAP2Q13576 1575 aa35.28■■■■□ 3.24
CLPTM1L-201ENST00000320895 EFCAB5A4FU69 1503 aa35.27■■■■□ 3.24
CLPTM1L-201ENST00000320895 SIN3AQ96ST3 1273 aa35.25■■■■□ 3.23
CLPTM1L-201ENST00000320895 SETD5Q9C0A6 1442 aa35.24■■■■□ 3.23
CLPTM1L-201ENST00000320895 CASKIN1Q8WXD9 1431 aa35.23■■■■□ 3.23
CLPTM1L-201ENST00000320895 CFAP43Q8NDM7 1665 aa35.21■■■■□ 3.23
CLPTM1L-201ENST00000320895 SAMD9Q5K651 1589 aa35.2■■■■□ 3.23
CLPTM1L-201ENST00000320895 FYCO1Q9BQS8 1478 aa35.2■■■■□ 3.23
CLPTM1L-201ENST00000320895 CEP170Q5SW79 1584 aa35.19■■■■□ 3.22
CLPTM1L-201ENST00000320895 MAPKBP1O60336 1514 aa35.16■■■■□ 3.22
CLPTM1L-201ENST00000320895 ARID3CA6NKF2 412 aa35.13■■■■□ 3.21
CLPTM1L-201ENST00000320895 KIAA0586Q9BVV6 1533 aa35.13■■■■□ 3.21
CLPTM1L-201ENST00000320895 FMN1Q68DA7 1419 aa35.12■■■■□ 3.21
CLPTM1L-201ENST00000320895 MTUS2Q5JR59 1369 aa35.11■■■■□ 3.21
CLPTM1L-201ENST00000320895 CHD1O14646 1710 aa35.02■■■■□ 3.2
CLPTM1L-201ENST00000320895 UGGT2Q9NYU1 1516 aa35.01■■■■□ 3.19
CLPTM1L-201ENST00000320895 NUP160Q12769 1436 aa35■■■■□ 3.19
CLPTM1L-201ENST00000320895 FGD6Q6ZV73 1430 aa34.97■■■■□ 3.19
CLPTM1L-201ENST00000320895 DISP1Q96F81 1524 aa34.97■■■■□ 3.19
CLPTM1L-201ENST00000320895 JPH4Q96JJ6 628 aa34.96■■■■□ 3.19
CLPTM1L-201ENST00000320895 HIRIP3Q9BW71 556 aaPredicted RBP34.95■■■■□ 3.19
CLPTM1L-201ENST00000320895 LRRIQ1Q96JM4 1722 aa34.93■■■■□ 3.18
CLPTM1L-201ENST00000320895 KIAA0556O60303 1618 aa34.92■■■■□ 3.18
CLPTM1L-201ENST00000320895 PTPRKQ15262 1439 aa34.92■■■■□ 3.18
CLPTM1L-201ENST00000320895 NCOA2Q15596 1464 aa34.87■■■■□ 3.17
CLPTM1L-201ENST00000320895 CHIC2Q9UKJ5 165 aa34.85■■■■□ 3.17
CLPTM1L-201ENST00000320895 KCNH8Q96L42 1107 aa34.79■■■■□ 3.16
CLPTM1L-201ENST00000320895 MAGI3Q5TCQ9 1506 aa34.78■■■■□ 3.16
CLPTM1L-201ENST00000320895 RRP7BPQ9NSQ0 103 aa34.78■■■■□ 3.16
CLPTM1L-201ENST00000320895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.76■■■■□ 3.156e-11■□□□□ 8.5
CLPTM1L-201ENST00000320895 MYOM3Q5VTT5 1437 aa34.75■■■■□ 3.15
CLPTM1L-201ENST00000320895 DDX10Q13206 875 aaKnown RBP34.75■■■■□ 3.15
CLPTM1L-201ENST00000320895 CDK13Q14004 1512 aaKnown RBP34.73■■■■□ 3.15
CLPTM1L-201ENST00000320895 CCDC18Q5T9S5 1454 aa34.72■■■■□ 3.15
CLPTM1L-201ENST00000320895 CARMIL2Q6F5E8 1435 aa34.72■■■■□ 3.15
CLPTM1L-201ENST00000320895 PRG4Q92954 1404 aaPredicted RBP34.71■■■■□ 3.15
CLPTM1L-201ENST00000320895 HECW1Q76N89 1606 aa34.68■■■■□ 3.14
CLPTM1L-201ENST00000320895 PLB1Q6P1J6 1458 aa34.68■■■■□ 3.14
CLPTM1L-201ENST00000320895 PPP1R15AO75807 674 aaPredicted RBP34.66■■■■□ 3.14
CLPTM1L-201ENST00000320895 EPRSP07814 1512 aaKnown RBP34.65■■■■□ 3.14
CLPTM1L-201ENST00000320895 SUPT6HQ7KZ85 1726 aaKnown RBP34.63■■■■□ 3.13
CLPTM1L-201ENST00000320895 HFM1A2PYH4 1435 aa34.63■■■■□ 3.13
CLPTM1L-201ENST00000320895 NAIPQ13075 1403 aa34.63■■■■□ 3.13
CLPTM1L-201ENST00000320895 EHBP1L1Q8N3D4 1523 aa34.62■■■■□ 3.13
CLPTM1L-201ENST00000320895 RAPGEF6Q8TEU7 1601 aa34.6■■■■□ 3.13
CLPTM1L-201ENST00000320895 ERCC6L2Q5T890 1561 aa34.59■■■■□ 3.13
CLPTM1L-201ENST00000320895 PTPN23Q9H3S7 1636 aa34.58■■■■□ 3.13
CLPTM1L-201ENST00000320895 NUP153P49790 1475 aaKnown RBP34.58■■■■□ 3.13
CLPTM1L-201ENST00000320895 TONSLQ96HA7 1378 aa34.56■■■■□ 3.12
CLPTM1L-201ENST00000320895 TRIM52Q96A61 297 aa34.56■■■■□ 3.12
CLPTM1L-201ENST00000320895 UACAQ9BZF9 1416 aa34.53■■■■□ 3.12
CLPTM1L-201ENST00000320895 TIMELESSQ9UNS1 1208 aa34.48■■■■□ 3.11
CLPTM1L-201ENST00000320895 PTPRGP23470 1445 aa34.47■■■■□ 3.11
CLPTM1L-201ENST00000320895 FOXD1Q16676 465 aa34.47■■■■□ 3.11
CLPTM1L-201ENST00000320895 ARHGEF11O15085 1522 aa34.47■■■■□ 3.11
CLPTM1L-201ENST00000320895 ZNF644Q9H582 1327 aaPredicted RBP34.46■■■■□ 3.11
CLPTM1L-201ENST00000320895 SHROOM2Q13796 1616 aa34.45■■■■□ 3.11
CLPTM1L-201ENST00000320895 CLASP1Q7Z460 1538 aa34.44■■■■□ 3.1
CLPTM1L-201ENST00000320895 PELP1Q8IZL8 1130 aaKnown RBP34.44■■■■□ 3.1
CLPTM1L-201ENST00000320895 KDM6BO15054 1643 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms