RNA–Protein interactions for RNA: ENST00000315588.9

MED29-201, Transcript of mediator complex subunit 29, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MED29, Length 3,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED29-201ENST00000315588 FKBP8Q14318 412 aa17.02■□□□□ 0.32
MED29-201ENST00000315588 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.31
MED29-201ENST00000315588 KIF27Q86VH2 1401 aa17■□□□□ 0.31
MED29-201ENST00000315588 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
MED29-201ENST00000315588 ARAP1Q96P48 1450 aa17■□□□□ 0.31
MED29-201ENST00000315588 ITGAEP38570 1179 aa16.99■□□□□ 0.31
MED29-201ENST00000315588 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
MED29-201ENST00000315588 PRKCSHP14314 528 aaPredicted RBP16.97■□□□□ 0.31
MED29-201ENST00000315588 IGF1RP08069 1367 aa16.97■□□□□ 0.31
MED29-201ENST00000315588 NEFLP07196 543 aa16.96■□□□□ 0.31
MED29-201ENST00000315588 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
MED29-201ENST00000315588 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
MED29-201ENST00000315588 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
MED29-201ENST00000315588 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
MED29-201ENST00000315588 CFAP43Q8NDM7 1665 aa16.9■□□□□ 0.3
MED29-201ENST00000315588 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
MED29-201ENST00000315588 APLP2Q06481 763 aa16.89■□□□□ 0.29
MED29-201ENST00000315588 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
MED29-201ENST00000315588 CUX2O14529 1486 aa16.88■□□□□ 0.29
MED29-201ENST00000315588 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
MED29-201ENST00000315588 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
MED29-201ENST00000315588 CLIP1P30622 1438 aa16.85■□□□□ 0.29
MED29-201ENST00000315588 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
MED29-201ENST00000315588 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
MED29-201ENST00000315588 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
MED29-201ENST00000315588 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.29
MED29-201ENST00000315588 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
MED29-201ENST00000315588 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
MED29-201ENST00000315588 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.282e-8■■■■□ 22.2
MED29-201ENST00000315588 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
MED29-201ENST00000315588 SNAPC4Q5SXM2 1469 aa16.7■□□□□ 0.26
MED29-201ENST00000315588 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
MED29-201ENST00000315588 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
MED29-201ENST00000315588 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
MED29-201ENST00000315588 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
MED29-201ENST00000315588 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
MED29-201ENST00000315588 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
MED29-201ENST00000315588 MSH5O43196 834 aa16.66■□□□□ 0.26
MED29-201ENST00000315588 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
MED29-201ENST00000315588 PCF11O94913 1555 aaKnown RBP16.65■□□□□ 0.26
MED29-201ENST00000315588 NBR1Q14596 966 aa16.65■□□□□ 0.26
MED29-201ENST00000315588 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
MED29-201ENST00000315588 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
MED29-201ENST00000315588 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
MED29-201ENST00000315588 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
MED29-201ENST00000315588 CDK11AQ9UQ88 783 aaPredicted RBP16.63■□□□□ 0.25
MED29-201ENST00000315588 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
MED29-201ENST00000315588 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
MED29-201ENST00000315588 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
MED29-201ENST00000315588 HIRIP3Q9BW71 556 aaPredicted RBP16.58■□□□□ 0.24
MED29-201ENST00000315588 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
MED29-201ENST00000315588 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
MED29-201ENST00000315588 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
MED29-201ENST00000315588 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
MED29-201ENST00000315588 IQGAP2Q13576 1575 aa16.53■□□□□ 0.24
MED29-201ENST00000315588 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
MED29-201ENST00000315588 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
MED29-201ENST00000315588 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
MED29-201ENST00000315588 LRRC9Q6ZRR7 1453 aa16.49■□□□□ 0.23
MED29-201ENST00000315588 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
MED29-201ENST00000315588 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
MED29-201ENST00000315588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.47■□□□□ 0.23
MED29-201ENST00000315588 DISP1Q96F81 1524 aa16.46■□□□□ 0.22
MED29-201ENST00000315588 NUP160Q12769 1436 aa16.45■□□□□ 0.22
MED29-201ENST00000315588 ADCY10Q96PN6 1610 aa16.44■□□□□ 0.22
MED29-201ENST00000315588 ANP32CO43423 234 aa16.43■□□□□ 0.22
MED29-201ENST00000315588 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
MED29-201ENST00000315588 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
MED29-201ENST00000315588 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
MED29-201ENST00000315588 RTL5Q5HYW3 569 aaPredicted RBP16.42■□□□□ 0.22
MED29-201ENST00000315588 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
MED29-201ENST00000315588 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
MED29-201ENST00000315588 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
MED29-201ENST00000315588 HECW1Q76N89 1606 aa16.38■□□□□ 0.21
MED29-201ENST00000315588 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
MED29-201ENST00000315588 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
MED29-201ENST00000315588 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
MED29-201ENST00000315588 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
MED29-201ENST00000315588 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
MED29-201ENST00000315588 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
MED29-201ENST00000315588 TCOF1Q13428 1488 aaKnown RBP16.34■□□□□ 0.21
MED29-201ENST00000315588 EIF5BO60841 1220 aaKnown RBP16.34■□□□□ 0.21
MED29-201ENST00000315588 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
MED29-201ENST00000315588 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
MED29-201ENST00000315588 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
MED29-201ENST00000315588 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
MED29-201ENST00000315588 FHOD3Q2V2M9 1422 aa16.3■□□□□ 0.2
MED29-201ENST00000315588 ABCA8O94911 1581 aa16.3■□□□□ 0.2
MED29-201ENST00000315588 RAPGEF6Q8TEU7 1601 aa16.29■□□□□ 0.2
MED29-201ENST00000315588 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
MED29-201ENST00000315588 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
MED29-201ENST00000315588 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
MED29-201ENST00000315588 CHD1O14646 1710 aa16.28■□□□□ 0.2
MED29-201ENST00000315588 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
MED29-201ENST00000315588 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
MED29-201ENST00000315588 IL27Q8NEV9 243 aa16.27■□□□□ 0.19
MED29-201ENST00000315588 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
MED29-201ENST00000315588 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
MED29-201ENST00000315588 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
MED29-201ENST00000315588 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms