RNA–Protein interactions for RNA: ENST00000315588.9

MED29-201, Transcript of mediator complex subunit 29, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MED29, Length 3,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED29-201ENST00000315588 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
MED29-201ENST00000315588 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
MED29-201ENST00000315588 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
MED29-201ENST00000315588 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
MED29-201ENST00000315588 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
MED29-201ENST00000315588 HRCP23327 699 aa19.72■□□□□ 0.75
MED29-201ENST00000315588 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.74
MED29-201ENST00000315588 NACADO15069 1562 aa19.64■□□□□ 0.74
MED29-201ENST00000315588 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
MED29-201ENST00000315588 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
MED29-201ENST00000315588 ABCC9O60706 1549 aa19.44■□□□□ 0.7
MED29-201ENST00000315588 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
MED29-201ENST00000315588 PELP1Q8IZL8 1130 aaKnown RBP19.35■□□□□ 0.69
MED29-201ENST00000315588 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
MED29-201ENST00000315588 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
MED29-201ENST00000315588 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
MED29-201ENST00000315588 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
MED29-201ENST00000315588 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
MED29-201ENST00000315588 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
MED29-201ENST00000315588 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
MED29-201ENST00000315588 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
MED29-201ENST00000315588 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
MED29-201ENST00000315588 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
MED29-201ENST00000315588 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
MED29-201ENST00000315588 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
MED29-201ENST00000315588 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
MED29-201ENST00000315588 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
MED29-201ENST00000315588 WIZO95785 1651 aa18.63■□□□□ 0.57
MED29-201ENST00000315588 MYT1Q01538 1121 aa18.62■□□□□ 0.57
MED29-201ENST00000315588 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.57
MED29-201ENST00000315588 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
MED29-201ENST00000315588 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
MED29-201ENST00000315588 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
MED29-201ENST00000315588 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
MED29-201ENST00000315588 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
MED29-201ENST00000315588 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
MED29-201ENST00000315588 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
MED29-201ENST00000315588 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
MED29-201ENST00000315588 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.51
MED29-201ENST00000315588 HMGXB3Q12766 1538 aa18.22■□□□□ 0.51
MED29-201ENST00000315588 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
MED29-201ENST00000315588 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
MED29-201ENST00000315588 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
MED29-201ENST00000315588 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
MED29-201ENST00000315588 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
MED29-201ENST00000315588 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
MED29-201ENST00000315588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
MED29-201ENST00000315588 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
MED29-201ENST00000315588 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
MED29-201ENST00000315588 TTBK1Q5TCY1 1321 aaPredicted RBP17.98■□□□□ 0.47
MED29-201ENST00000315588 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
MED29-201ENST00000315588 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
MED29-201ENST00000315588 TRIM41Q8WV44 630 aa17.82■□□□□ 0.44
MED29-201ENST00000315588 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
MED29-201ENST00000315588 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
MED29-201ENST00000315588 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.43
MED29-201ENST00000315588 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
MED29-201ENST00000315588 CFTRP13569 1480 aa17.73■□□□□ 0.43
MED29-201ENST00000315588 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
MED29-201ENST00000315588 KIF21BO75037 1637 aa17.64■□□□□ 0.41
MED29-201ENST00000315588 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
MED29-201ENST00000315588 EEA1Q15075 1411 aa17.6■□□□□ 0.41
MED29-201ENST00000315588 CUX1P39880 1505 aa17.54■□□□□ 0.4
MED29-201ENST00000315588 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
MED29-201ENST00000315588 MIER1Q8N108 512 aa17.53■□□□□ 0.4
MED29-201ENST00000315588 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
MED29-201ENST00000315588 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
MED29-201ENST00000315588 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
MED29-201ENST00000315588 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
MED29-201ENST00000315588 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
MED29-201ENST00000315588 SOGA1O94964 1423 aa17.41■□□□□ 0.38
MED29-201ENST00000315588 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
MED29-201ENST00000315588 BCANQ96GW7 911 aa17.36■□□□□ 0.37
MED29-201ENST00000315588 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
MED29-201ENST00000315588 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
MED29-201ENST00000315588 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
MED29-201ENST00000315588 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
MED29-201ENST00000315588 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
MED29-201ENST00000315588 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
MED29-201ENST00000315588 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.36
MED29-201ENST00000315588 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
MED29-201ENST00000315588 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
MED29-201ENST00000315588 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
MED29-201ENST00000315588 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
MED29-201ENST00000315588 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
MED29-201ENST00000315588 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
MED29-201ENST00000315588 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
MED29-201ENST00000315588 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
MED29-201ENST00000315588 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
MED29-201ENST00000315588 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
MED29-201ENST00000315588 CUL7Q14999 1698 aa17.12■□□□□ 0.33
MED29-201ENST00000315588 CEP162Q5TB80 1403 aa17.11■□□□□ 0.33
MED29-201ENST00000315588 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
MED29-201ENST00000315588 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
MED29-201ENST00000315588 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
MED29-201ENST00000315588 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
MED29-201ENST00000315588 NESP48681 1621 aa17.06■□□□□ 0.32
MED29-201ENST00000315588 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
MED29-201ENST00000315588 WDR62O43379 1518 aa17.04■□□□□ 0.32
MED29-201ENST00000315588 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms