RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 CEP162Q5TB80 1403 aa39.61■■■■□ 3.93
CDPF1-201ENST00000314567 CTTNBP2Q8WZ74 1663 aa39.6■■■■□ 3.93
CDPF1-201ENST00000314567 CEP170Q5SW79 1584 aa39.53■■■■□ 3.92
CDPF1-201ENST00000314567 CLIP1P30622 1438 aa39.46■■■■□ 3.91
CDPF1-201ENST00000314567 NUP160Q12769 1436 aa39.43■■■■□ 3.9
CDPF1-201ENST00000314567 IQGAP2Q13576 1575 aa39.38■■■■□ 3.89
CDPF1-201ENST00000314567 KIAA0586Q9BVV6 1533 aa39.36■■■■□ 3.89
CDPF1-201ENST00000314567 ARHGAP35Q9NRY4 1499 aa39.3■■■■□ 3.88
CDPF1-201ENST00000314567 P3H3Q8IVL6 736 aa39.27■■■■□ 3.88
CDPF1-201ENST00000314567 ARAP1Q96P48 1450 aa39.2■■■■□ 3.87
CDPF1-201ENST00000314567 UGGT2Q9NYU1 1516 aa39.14■■■■□ 3.86
CDPF1-201ENST00000314567 SAMD9Q5K651 1589 aa39.14■■■■□ 3.86
CDPF1-201ENST00000314567 JPH4Q96JJ6 628 aa39.13■■■■□ 3.86
CDPF1-201ENST00000314567 FHOD3Q2V2M9 1422 aa39.13■■■■□ 3.85
CDPF1-201ENST00000314567 EFCAB5A4FU69 1503 aa39.11■■■■□ 3.85
CDPF1-201ENST00000314567 CLASP1Q7Z460 1538 aa39.1■■■■□ 3.85
CDPF1-201ENST00000314567 DISP1Q96F81 1524 aa39.06■■■■□ 3.84
CDPF1-201ENST00000314567 OSCARQ8IYS5 282 aa39.04■■■■□ 3.84
CDPF1-201ENST00000314567 KIAA0556O60303 1618 aa39■■■■□ 3.83
CDPF1-201ENST00000314567 TRIM26Q12899 539 aaPredicted RBP38.98■■■■□ 3.83
CDPF1-201ENST00000314567 VPS8Q8N3P4 1428 aa38.98■■■■□ 3.83
CDPF1-201ENST00000314567 SHROOM2Q13796 1616 aa38.98■■■■□ 3.83
CDPF1-201ENST00000314567 PRG4Q92954 1404 aaPredicted RBP38.96■■■■□ 3.83
CDPF1-201ENST00000314567 PCGF6Q9BYE7 350 aa38.96■■■■□ 3.83
CDPF1-201ENST00000314567 TTBK1Q5TCY1 1321 aaPredicted RBP38.95■■■■□ 3.83
CDPF1-201ENST00000314567 ERCC6L2Q5T890 1561 aa38.91■■■■□ 3.82
CDPF1-201ENST00000314567 CARMIL2Q6F5E8 1435 aa38.86■■■■□ 3.81
CDPF1-201ENST00000314567 PCF11O94913 1555 aaKnown RBP38.78■■■■□ 3.8
CDPF1-201ENST00000314567 FMN1Q68DA7 1419 aa38.77■■■■□ 3.8
CDPF1-201ENST00000314567 PPARGC1BQ86YN6 1023 aaKnown RBP38.75■■■■□ 3.79
CDPF1-201ENST00000314567 ATP1B4Q9UN42 357 aaPredicted RBP38.73■■■■□ 3.79
CDPF1-201ENST00000314567 CASKIN1Q8WXD9 1431 aa38.65■■■■□ 3.78
CDPF1-201ENST00000314567 PTPRGP23470 1445 aa38.61■■■■□ 3.77
CDPF1-201ENST00000314567 PLB1Q6P1J6 1458 aa38.61■■■■□ 3.77
CDPF1-201ENST00000314567 FYCO1Q9BQS8 1478 aa38.61■■■■□ 3.77
CDPF1-201ENST00000314567 LRRIQ1Q96JM4 1722 aa38.57■■■■□ 3.76
CDPF1-201ENST00000314567 ARID3CA6NKF2 412 aa38.56■■■■□ 3.76
CDPF1-201ENST00000314567 APLP2Q06481 763 aa38.54■■■■□ 3.76
CDPF1-201ENST00000314567 RAPGEF6Q8TEU7 1601 aa38.53■■■■□ 3.76
CDPF1-201ENST00000314567 HECW1Q76N89 1606 aa38.47■■■■□ 3.75
CDPF1-201ENST00000314567 ABCA8O94911 1581 aa38.47■■■■□ 3.75
CDPF1-201ENST00000314567 NUP153P49790 1475 aaKnown RBP38.45■■■■□ 3.75
CDPF1-201ENST00000314567 KANK4Q5T7N3 995 aaPredicted RBP38.45■■■■□ 3.75
CDPF1-201ENST00000314567 ARHGEF11O15085 1522 aa38.44■■■■□ 3.74
CDPF1-201ENST00000314567 TIAM1Q13009 1591 aa38.43■■■■□ 3.74
CDPF1-201ENST00000314567 CDK13Q14004 1512 aaKnown RBP38.41■■■■□ 3.74
CDPF1-201ENST00000314567 CFAP43Q8NDM7 1665 aa38.39■■■■□ 3.74
CDPF1-201ENST00000314567 EPRSP07814 1512 aaKnown RBP38.39■■■■□ 3.74
CDPF1-201ENST00000314567 UACAQ9BZF9 1416 aa38.37■■■■□ 3.73
CDPF1-201ENST00000314567 RIMBP3CA6NJZ7 1639 aa38.33■■■■□ 3.73
CDPF1-201ENST00000314567 RIMBP3BA6NNM3 1639 aa38.33■■■■□ 3.73
CDPF1-201ENST00000314567 RIMBP3Q9UFD9 1639 aa38.33■■■■□ 3.73
CDPF1-201ENST00000314567 MAP3K1Q13233 1512 aa38.32■■■■□ 3.72
CDPF1-201ENST00000314567 CCDC18Q5T9S5 1454 aa38.29■■■■□ 3.72
CDPF1-201ENST00000314567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.27■■■■□ 3.72
CDPF1-201ENST00000314567 HNRNPUL2Q1KMD3 747 aaKnown RBP38.27■■■■□ 3.72
CDPF1-201ENST00000314567 ABCC2Q92887 1545 aa38.27■■■■□ 3.72
CDPF1-201ENST00000314567 LRRC9Q6ZRR7 1453 aa38.25■■■■□ 3.71
CDPF1-201ENST00000314567 MAGI3Q5TCQ9 1506 aa38.23■■■■□ 3.71
CDPF1-201ENST00000314567 ATP10BO94823 1461 aa38.22■■■■□ 3.71
CDPF1-201ENST00000314567 ADCY10Q96PN6 1610 aa38.21■■■■□ 3.71
CDPF1-201ENST00000314567 UHRF1BP1LA0JNW5 1464 aa38.16■■■■□ 3.7
CDPF1-201ENST00000314567 HRCP23327 699 aa38.15■■■■□ 3.7
CDPF1-201ENST00000314567 MTUS2Q5JR59 1369 aa38.15■■■■□ 3.7
CDPF1-201ENST00000314567 CYB5RLQ6IPT4 315 aa38.14■■■■□ 3.7
CDPF1-201ENST00000314567 ZCCHC11Q5TAX3 1644 aaKnown RBP38.07■■■■□ 3.69
CDPF1-201ENST00000314567 EHBP1L1Q8N3D4 1523 aa38.05■■■■□ 3.68
CDPF1-201ENST00000314567 KDM5BQ9UGL1 1544 aa38.05■■■■□ 3.68
CDPF1-201ENST00000314567 CDK11AQ9UQ88 783 aaPredicted RBP38.01■■■■□ 3.67
CDPF1-201ENST00000314567 PLEKHD1A6NEE1 506 aa37.96■■■■□ 3.67
CDPF1-201ENST00000314567 TROQ12816 1431 aaPredicted RBP37.95■■■■□ 3.67
CDPF1-201ENST00000314567 SUPT6HQ7KZ85 1726 aaKnown RBP37.94■■■■□ 3.66
CDPF1-201ENST00000314567 PHLDB1Q86UU1 1377 aa37.94■■■■□ 3.66
CDPF1-201ENST00000314567 NCOA2Q15596 1464 aa37.93■■■■□ 3.66
CDPF1-201ENST00000314567 KIF14Q15058 1648 aa37.91■■■■□ 3.66
CDPF1-201ENST00000314567 NPM1P06748 294 aaKnown RBP eCLIP37.83■■■■□ 3.65
CDPF1-201ENST00000314567 KCNH8Q96L42 1107 aa37.81■■■■□ 3.64
CDPF1-201ENST00000314567 ASXL2Q76L83 1435 aa37.77■■■■□ 3.64
CDPF1-201ENST00000314567 DNAJC5Q9H3Z4 198 aa37.74■■■■□ 3.63
CDPF1-201ENST00000314567 WDR7Q9Y4E6 1490 aa37.72■■■■□ 3.63
CDPF1-201ENST00000314567 RRBP1Q9P2E9 1410 aaKnown RBP37.71■■■■□ 3.63
CDPF1-201ENST00000314567 MYOM3Q5VTT5 1437 aa37.7■■■■□ 3.63
CDPF1-201ENST00000314567 ABCC10Q5T3U5 1492 aa37.69■■■■□ 3.62
CDPF1-201ENST00000314567 CCNB3Q8WWL7 1395 aa37.68■■■■□ 3.62
CDPF1-201ENST00000314567 TTC37Q6PGP7 1564 aa37.66■■■■□ 3.62
CDPF1-201ENST00000314567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.65■■■■□ 3.62
CDPF1-201ENST00000314567 ZEB1P37275 1124 aaPredicted RBP37.65■■■■□ 3.62
CDPF1-201ENST00000314567 FGD6Q6ZV73 1430 aa37.65■■■■□ 3.62
CDPF1-201ENST00000314567 GPATCH8Q9UKJ3 1502 aaKnown RBP37.61■■■■□ 3.61
CDPF1-201ENST00000314567 CDC42BPAQ5VT25 1732 aa37.6■■■■□ 3.61
CDPF1-201ENST00000314567 FAM50AQ14320 339 aaKnown RBP37.58■■■■□ 3.61
CDPF1-201ENST00000314567 MAPKBP1O60336 1514 aa37.56■■■■□ 3.6
CDPF1-201ENST00000314567 PTPN23Q9H3S7 1636 aa37.53■■■■□ 3.6
CDPF1-201ENST00000314567 ITSN2Q9NZM3 1697 aa37.53■■■■□ 3.6
CDPF1-201ENST00000314567 ZNF644Q9H582 1327 aaPredicted RBP37.51■■■■□ 3.59
CDPF1-201ENST00000314567 CFDP1Q9UEE9 299 aaPredicted RBP37.5■■■■□ 3.59
CDPF1-201ENST00000314567 ITGAEP38570 1179 aa37.5■■■■□ 3.59
CDPF1-201ENST00000314567 CDC42BPBQ9Y5S2 1711 aa37.48■■■■□ 3.59
CDPF1-201ENST00000314567 ZNF777Q9ULD5 760 aaPredicted RBP37.47■■■■□ 3.59
CDPF1-201ENST00000314567 MIA2Q96PC5 1412 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms