RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 CHMP7Q8WUX9 453 aaPredicted RBP17.95■□□□□ 0.46
CTDSPL-202ENST00000310189 CLIP1P30622 1438 aa17.92■□□□□ 0.46
CTDSPL-202ENST00000310189 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
CTDSPL-202ENST00000310189 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL-202ENST00000310189 CHD1O14646 1710 aa17.86■□□□□ 0.45
CTDSPL-202ENST00000310189 NUP160Q12769 1436 aa17.8■□□□□ 0.44
CTDSPL-202ENST00000310189 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
CTDSPL-202ENST00000310189 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
CTDSPL-202ENST00000310189 APLP2Q06481 763 aa17.77■□□□□ 0.44
CTDSPL-202ENST00000310189 KIAA0586Q9BVV6 1533 aa17.74■□□□□ 0.43
CTDSPL-202ENST00000310189 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
CTDSPL-202ENST00000310189 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
CTDSPL-202ENST00000310189 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
CTDSPL-202ENST00000310189 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
CTDSPL-202ENST00000310189 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
CTDSPL-202ENST00000310189 CLASP1Q7Z460 1538 aa17.68■□□□□ 0.42
CTDSPL-202ENST00000310189 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
CTDSPL-202ENST00000310189 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
CTDSPL-202ENST00000310189 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
CTDSPL-202ENST00000310189 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
CTDSPL-202ENST00000310189 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
CTDSPL-202ENST00000310189 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
CTDSPL-202ENST00000310189 P3H3Q8IVL6 736 aa17.58■□□□□ 0.41
CTDSPL-202ENST00000310189 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
CTDSPL-202ENST00000310189 CARMIL2Q6F5E8 1435 aa17.57■□□□□ 0.4
CTDSPL-202ENST00000310189 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
CTDSPL-202ENST00000310189 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
CTDSPL-202ENST00000310189 SAMD9Q5K651 1589 aa17.56■□□□□ 0.4
CTDSPL-202ENST00000310189 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
CTDSPL-202ENST00000310189 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
CTDSPL-202ENST00000310189 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
CTDSPL-202ENST00000310189 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
CTDSPL-202ENST00000310189 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
CTDSPL-202ENST00000310189 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
CTDSPL-202ENST00000310189 FYCO1Q9BQS8 1478 aa17.47■□□□□ 0.39
CTDSPL-202ENST00000310189 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
CTDSPL-202ENST00000310189 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
CTDSPL-202ENST00000310189 ARHGEF11O15085 1522 aa17.43■□□□□ 0.38
CTDSPL-202ENST00000310189 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
CTDSPL-202ENST00000310189 PTPRGP23470 1445 aa17.43■□□□□ 0.38
CTDSPL-202ENST00000310189 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
CTDSPL-202ENST00000310189 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
CTDSPL-202ENST00000310189 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
CTDSPL-202ENST00000310189 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
CTDSPL-202ENST00000310189 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
CTDSPL-202ENST00000310189 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
CTDSPL-202ENST00000310189 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
CTDSPL-202ENST00000310189 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
CTDSPL-202ENST00000310189 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.37
CTDSPL-202ENST00000310189 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
CTDSPL-202ENST00000310189 UACAQ9BZF9 1416 aa17.32■□□□□ 0.36
CTDSPL-202ENST00000310189 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
CTDSPL-202ENST00000310189 ABCA8O94911 1581 aa17.31■□□□□ 0.36
CTDSPL-202ENST00000310189 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
CTDSPL-202ENST00000310189 DNAJC5Q9H3Z4 198 aa17.28■□□□□ 0.36
CTDSPL-202ENST00000310189 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
CTDSPL-202ENST00000310189 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.36
CTDSPL-202ENST00000310189 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
CTDSPL-202ENST00000310189 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
CTDSPL-202ENST00000310189 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
CTDSPL-202ENST00000310189 UHRF1BP1LA0JNW5 1464 aa17.25■□□□□ 0.35
CTDSPL-202ENST00000310189 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
CTDSPL-202ENST00000310189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
CTDSPL-202ENST00000310189 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
CTDSPL-202ENST00000310189 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
CTDSPL-202ENST00000310189 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
CTDSPL-202ENST00000310189 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
CTDSPL-202ENST00000310189 LRRIQ1Q96JM4 1722 aa17.19■□□□□ 0.34
CTDSPL-202ENST00000310189 SUPT6HQ7KZ85 1726 aaKnown RBP17.19■□□□□ 0.34
CTDSPL-202ENST00000310189 ATP10BO94823 1461 aa17.18■□□□□ 0.34
CTDSPL-202ENST00000310189 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
CTDSPL-202ENST00000310189 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
CTDSPL-202ENST00000310189 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
CTDSPL-202ENST00000310189 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
CTDSPL-202ENST00000310189 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
CTDSPL-202ENST00000310189 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
CTDSPL-202ENST00000310189 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
CTDSPL-202ENST00000310189 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
CTDSPL-202ENST00000310189 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
CTDSPL-202ENST00000310189 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.32
CTDSPL-202ENST00000310189 HRCP23327 699 aa17.07■□□□□ 0.32
CTDSPL-202ENST00000310189 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
CTDSPL-202ENST00000310189 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
CTDSPL-202ENST00000310189 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
CTDSPL-202ENST00000310189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.322e-7■■■■■ 32.5
CTDSPL-202ENST00000310189 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
CTDSPL-202ENST00000310189 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
CTDSPL-202ENST00000310189 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
CTDSPL-202ENST00000310189 ITGAEP38570 1179 aa17.04■□□□□ 0.32
CTDSPL-202ENST00000310189 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
CTDSPL-202ENST00000310189 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
CTDSPL-202ENST00000310189 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
CTDSPL-202ENST00000310189 KIF14Q15058 1648 aa17■□□□□ 0.31
CTDSPL-202ENST00000310189 KCNH8Q96L42 1107 aa17■□□□□ 0.31
CTDSPL-202ENST00000310189 FOXD1Q16676 465 aa16.99■□□□□ 0.31
CTDSPL-202ENST00000310189 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
CTDSPL-202ENST00000310189 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
CTDSPL-202ENST00000310189 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
CTDSPL-202ENST00000310189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTDSPL-202ENST00000310189 TCOF1Q13428 1488 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms