RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 GRIN2AQ12879 1464 aa35.54■■■■□ 3.28
IRF3-201ENST00000309877 FBLN2P98095 1184 aa35.52■■■■□ 3.28
IRF3-201ENST00000309877 ARHGAP35Q9NRY4 1499 aa35.47■■■■□ 3.27
IRF3-201ENST00000309877 ARAP1Q96P48 1450 aa35.42■■■■□ 3.26
IRF3-201ENST00000309877 VPS8Q8N3P4 1428 aa35.41■■■■□ 3.26
IRF3-201ENST00000309877 IQGAP2Q13576 1575 aa35.35■■■■□ 3.25
IRF3-201ENST00000309877 EFCAB5A4FU69 1503 aa35.35■■■■□ 3.25
IRF3-201ENST00000309877 KIAA0586Q9BVV6 1533 aa35.34■■■■□ 3.25
IRF3-201ENST00000309877 P3H3Q8IVL6 736 aa35.3■■■■□ 3.24
IRF3-201ENST00000309877 NUP160Q12769 1436 aa35.29■■■■□ 3.24
IRF3-201ENST00000309877 CEP170Q5SW79 1584 aa35.28■■■■□ 3.24
IRF3-201ENST00000309877 FHOD3Q2V2M9 1422 aa35.21■■■■□ 3.23
IRF3-201ENST00000309877 SAMD9Q5K651 1589 aa35.21■■■■□ 3.23
IRF3-201ENST00000309877 CHD1O14646 1710 aa35.2■■■■□ 3.23
IRF3-201ENST00000309877 APLP2Q06481 763 aa35.17■■■■□ 3.22
IRF3-201ENST00000309877 UGGT2Q9NYU1 1516 aa35.17■■■■□ 3.22
IRF3-201ENST00000309877 PPARGC1BQ86YN6 1023 aaKnown RBP35.14■■■■□ 3.22
IRF3-201ENST00000309877 FMN1Q68DA7 1419 aa35.07■■■■□ 3.2
IRF3-201ENST00000309877 JPH4Q96JJ6 628 aa35.07■■■■□ 3.2
IRF3-201ENST00000309877 DISP1Q96F81 1524 aa35.01■■■■□ 3.19
IRF3-201ENST00000309877 KIAA0556O60303 1618 aa34.98■■■■□ 3.19
IRF3-201ENST00000309877 TRIM26Q12899 539 aaPredicted RBP34.96■■■■□ 3.19
IRF3-201ENST00000309877 CARMIL2Q6F5E8 1435 aa34.96■■■■□ 3.19
IRF3-201ENST00000309877 ATP1B4Q9UN42 357 aaPredicted RBP34.95■■■■□ 3.18
IRF3-201ENST00000309877 CASKIN1Q8WXD9 1431 aa34.95■■■■□ 3.18
IRF3-201ENST00000309877 PCF11O94913 1555 aaKnown RBP34.94■■■■□ 3.18
IRF3-201ENST00000309877 TTBK1Q5TCY1 1321 aaPredicted RBP34.94■■■■□ 3.18
IRF3-201ENST00000309877 FYCO1Q9BQS8 1478 aa34.92■■■■□ 3.18
IRF3-201ENST00000309877 PCGF6Q9BYE7 350 aa34.86■■■■□ 3.17
IRF3-201ENST00000309877 PRG4Q92954 1404 aaPredicted RBP34.84■■■■□ 3.17
IRF3-201ENST00000309877 MAP3K1Q13233 1512 aa34.82■■■■□ 3.16
IRF3-201ENST00000309877 CLASP1Q7Z460 1538 aa34.82■■■■□ 3.16
IRF3-201ENST00000309877 SHROOM2Q13796 1616 aa34.78■■■■□ 3.16
IRF3-201ENST00000309877 TIAM1Q13009 1591 aa34.78■■■■□ 3.16
IRF3-201ENST00000309877 KANK4Q5T7N3 995 aaPredicted RBP34.77■■■■□ 3.16
IRF3-201ENST00000309877 OSCARQ8IYS5 282 aa34.72■■■■□ 3.15
IRF3-201ENST00000309877 CFAP43Q8NDM7 1665 aa34.69■■■■□ 3.14
IRF3-201ENST00000309877 HECW1Q76N89 1606 aa34.69■■■■□ 3.14
IRF3-201ENST00000309877 LRRC9Q6ZRR7 1453 aa34.64■■■■□ 3.14
IRF3-201ENST00000309877 CCDC18Q5T9S5 1454 aa34.63■■■■□ 3.13
IRF3-201ENST00000309877 PTPRGP23470 1445 aa34.63■■■■□ 3.13
IRF3-201ENST00000309877 RAPGEF6Q8TEU7 1601 aa34.62■■■■□ 3.13
IRF3-201ENST00000309877 PLB1Q6P1J6 1458 aa34.58■■■■□ 3.13
IRF3-201ENST00000309877 LRRIQ1Q96JM4 1722 aa34.57■■■■□ 3.13
IRF3-201ENST00000309877 EPRSP07814 1512 aaKnown RBP34.57■■■■□ 3.12
IRF3-201ENST00000309877 ERCC6L2Q5T890 1561 aa34.56■■■■□ 3.12
IRF3-201ENST00000309877 NUP153P49790 1475 aaKnown RBP34.53■■■■□ 3.12
IRF3-201ENST00000309877 ARID3CA6NKF2 412 aa34.53■■■■□ 3.12
IRF3-201ENST00000309877 MTUS2Q5JR59 1369 aa34.52■■■■□ 3.12
IRF3-201ENST00000309877 ABCA8O94911 1581 aa34.5■■■■□ 3.11
IRF3-201ENST00000309877 CDK13Q14004 1512 aaKnown RBP34.49■■■■□ 3.11
IRF3-201ENST00000309877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.45■■■■□ 3.11
IRF3-201ENST00000309877 HNRNPUL2Q1KMD3 747 aaKnown RBP34.45■■■■□ 3.11
IRF3-201ENST00000309877 UACAQ9BZF9 1416 aa34.41■■■■□ 3.1
IRF3-201ENST00000309877 EHBP1L1Q8N3D4 1523 aa34.4■■■■□ 3.1
IRF3-201ENST00000309877 CDK11AQ9UQ88 783 aaPredicted RBP34.39■■■■□ 3.1
IRF3-201ENST00000309877 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
IRF3-201ENST00000309877 PHLDB1Q86UU1 1377 aa34.31■■■■□ 3.08
IRF3-201ENST00000309877 ATP10BO94823 1461 aa34.29■■■■□ 3.08
IRF3-201ENST00000309877 RRBP1Q9P2E9 1410 aaKnown RBP34.29■■■■□ 3.08
IRF3-201ENST00000309877 SUPT6HQ7KZ85 1726 aaKnown RBP34.29■■■■□ 3.08
IRF3-201ENST00000309877 ABCC2Q92887 1545 aa34.27■■■■□ 3.08
IRF3-201ENST00000309877 NCOA2Q15596 1464 aa34.27■■■■□ 3.08
IRF3-201ENST00000309877 CCNB3Q8WWL7 1395 aa34.24■■■■□ 3.07
IRF3-201ENST00000309877 PLEKHD1A6NEE1 506 aa34.22■■■■□ 3.07
IRF3-201ENST00000309877 TROQ12816 1431 aaPredicted RBP34.21■■■■□ 3.07
IRF3-201ENST00000309877 UHRF1BP1LA0JNW5 1464 aa34.21■■■■□ 3.07
IRF3-201ENST00000309877 ARHGEF11O15085 1522 aa34.17■■■■□ 3.06
IRF3-201ENST00000309877 MYOM3Q5VTT5 1437 aa34.13■■■■□ 3.05
IRF3-201ENST00000309877 FGD6Q6ZV73 1430 aa34.09■■■■□ 3.05
IRF3-201ENST00000309877 FAM50AQ14320 339 aaKnown RBP34.09■■■■□ 3.05
IRF3-201ENST00000309877 KDM5BQ9UGL1 1544 aa34.06■■■■□ 3.04
IRF3-201ENST00000309877 ADCY10Q96PN6 1610 aa34.03■■■■□ 3.04
IRF3-201ENST00000309877 ZCCHC11Q5TAX3 1644 aaKnown RBP34.01■■■■□ 3.04
IRF3-201ENST00000309877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.01■■■■□ 3.034e-6■□□□□ 10.9
IRF3-201ENST00000309877 KIF14Q15058 1648 aa34■■■■□ 3.03
IRF3-201ENST00000309877 ITGAEP38570 1179 aa33.98■■■■□ 3.03
IRF3-201ENST00000309877 MIA2Q96PC5 1412 aa33.96■■■■□ 3.03
IRF3-201ENST00000309877 PTPN23Q9H3S7 1636 aa33.92■■■■□ 3.02
IRF3-201ENST00000309877 NPM1P06748 294 aaKnown RBP eCLIP33.9■■■■□ 3.02
IRF3-201ENST00000309877 ABCC10Q5T3U5 1492 aa33.89■■■■□ 3.02
IRF3-201ENST00000309877 RIMBP3CA6NJZ7 1639 aa33.88■■■■□ 3.01
IRF3-201ENST00000309877 RIMBP3BA6NNM3 1639 aa33.88■■■■□ 3.01
IRF3-201ENST00000309877 RIMBP3Q9UFD9 1639 aa33.88■■■■□ 3.01
IRF3-201ENST00000309877 GPATCH8Q9UKJ3 1502 aaKnown RBP33.87■■■■□ 3.01
IRF3-201ENST00000309877 TCOF1Q13428 1488 aaKnown RBP33.87■■■■□ 3.01
IRF3-201ENST00000309877 KCNH8Q96L42 1107 aa33.86■■■■□ 3.01
IRF3-201ENST00000309877 CFDP1Q9UEE9 299 aaPredicted RBP33.86■■■■□ 3.01
IRF3-201ENST00000309877 ITSN2Q9NZM3 1697 aa33.85■■■■□ 3.01
IRF3-201ENST00000309877 CYB5RLQ6IPT4 315 aa33.82■■■■□ 3
IRF3-201ENST00000309877 WDR7Q9Y4E6 1490 aa33.77■■■■□ 3
IRF3-201ENST00000309877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.75■■■□□ 2.993e-7■□□□□ 11.1
IRF3-201ENST00000309877 ZNF777Q9ULD5 760 aaPredicted RBP33.74■■■□□ 2.99
IRF3-201ENST00000309877 CDC42BPAQ5VT25 1732 aa33.74■■■□□ 2.99
IRF3-201ENST00000309877 ASXL2Q76L83 1435 aa33.74■■■□□ 2.99
IRF3-201ENST00000309877 ZNF644Q9H582 1327 aaPredicted RBP33.73■■■□□ 2.99
IRF3-201ENST00000309877 TTC37Q6PGP7 1564 aa33.71■■■□□ 2.99
IRF3-201ENST00000309877 CAMSAP2Q08AD1 1489 aa33.69■■■□□ 2.98
IRF3-201ENST00000309877 PTPRKQ15262 1439 aa33.66■■■□□ 2.98
IRF3-201ENST00000309877 PREX2Q70Z35 1606 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms