RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 CHD1O14646 1710 aa30.77■■■□□ 2.52
UBE2E1-201ENST00000306627 RIMBP3CA6NJZ7 1639 aa30.77■■■□□ 2.52
UBE2E1-201ENST00000306627 RIMBP3BA6NNM3 1639 aa30.77■■■□□ 2.52
UBE2E1-201ENST00000306627 RIMBP3Q9UFD9 1639 aa30.77■■■□□ 2.52
UBE2E1-201ENST00000306627 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
UBE2E1-201ENST00000306627 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
UBE2E1-201ENST00000306627 ARHGEF11O15085 1522 aa30.69■■■□□ 2.5
UBE2E1-201ENST00000306627 ARHGAP35Q9NRY4 1499 aa30.66■■■□□ 2.5
UBE2E1-201ENST00000306627 ARAP1Q96P48 1450 aa30.64■■■□□ 2.49
UBE2E1-201ENST00000306627 CHMP7Q8WUX9 453 aaPredicted RBP30.62■■■□□ 2.49
UBE2E1-201ENST00000306627 FBLN2P98095 1184 aa30.6■■■□□ 2.49
UBE2E1-201ENST00000306627 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
UBE2E1-201ENST00000306627 IQGAP2Q13576 1575 aa30.56■■■□□ 2.48
UBE2E1-201ENST00000306627 VPS8Q8N3P4 1428 aa30.53■■■□□ 2.48
UBE2E1-201ENST00000306627 NUP160Q12769 1436 aa30.51■■■□□ 2.48
UBE2E1-201ENST00000306627 EFCAB5A4FU69 1503 aa30.5■■■□□ 2.47
UBE2E1-201ENST00000306627 KIAA0586Q9BVV6 1533 aa30.5■■■□□ 2.47
UBE2E1-201ENST00000306627 SAMD9Q5K651 1589 aa30.48■■■□□ 2.47
UBE2E1-201ENST00000306627 P3H3Q8IVL6 736 aa30.42■■■□□ 2.46
UBE2E1-201ENST00000306627 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
UBE2E1-201ENST00000306627 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
UBE2E1-201ENST00000306627 UGGT2Q9NYU1 1516 aa30.41■■■□□ 2.46
UBE2E1-201ENST00000306627 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
UBE2E1-201ENST00000306627 DISP1Q96F81 1524 aa30.29■■■□□ 2.44
UBE2E1-201ENST00000306627 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
UBE2E1-201ENST00000306627 KIAA0556O60303 1618 aa30.27■■■□□ 2.44
UBE2E1-201ENST00000306627 PCF11O94913 1555 aaKnown RBP30.25■■■□□ 2.43
UBE2E1-201ENST00000306627 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
UBE2E1-201ENST00000306627 FMN1Q68DA7 1419 aa30.19■■■□□ 2.42
UBE2E1-201ENST00000306627 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
UBE2E1-201ENST00000306627 CASKIN1Q8WXD9 1431 aa30.14■■■□□ 2.42
UBE2E1-201ENST00000306627 FYCO1Q9BQS8 1478 aa30.13■■■□□ 2.41
UBE2E1-201ENST00000306627 APLP2Q06481 763 aa30.1■■■□□ 2.41
UBE2E1-201ENST00000306627 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
UBE2E1-201ENST00000306627 CARMIL2Q6F5E8 1435 aa30.09■■■□□ 2.41
UBE2E1-201ENST00000306627 PRG4Q92954 1404 aaPredicted RBP30.08■■■□□ 2.41
UBE2E1-201ENST00000306627 LRRIQ1Q96JM4 1722 aa30.06■■■□□ 2.4
UBE2E1-201ENST00000306627 TIAM1Q13009 1591 aa30.05■■■□□ 2.4
UBE2E1-201ENST00000306627 CFAP43Q8NDM7 1665 aa30.04■■■□□ 2.4
UBE2E1-201ENST00000306627 MAP3K1Q13233 1512 aa30.03■■■□□ 2.4
UBE2E1-201ENST00000306627 KANK4Q5T7N3 995 aaPredicted RBP30.01■■■□□ 2.4
UBE2E1-201ENST00000306627 ATP1B4Q9UN42 357 aaPredicted RBP30.01■■■□□ 2.4
UBE2E1-201ENST00000306627 ERCC6L2Q5T890 1561 aa30■■■□□ 2.39
UBE2E1-201ENST00000306627 TRIM26Q12899 539 aaPredicted RBP30■■■□□ 2.39
UBE2E1-201ENST00000306627 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
UBE2E1-201ENST00000306627 HECW1Q76N89 1606 aa29.96■■■□□ 2.39
UBE2E1-201ENST00000306627 PCGF6Q9BYE7 350 aa29.95■■■□□ 2.38
UBE2E1-201ENST00000306627 RAPGEF6Q8TEU7 1601 aa29.94■■■□□ 2.38
UBE2E1-201ENST00000306627 PLB1Q6P1J6 1458 aa29.9■■■□□ 2.38
UBE2E1-201ENST00000306627 LRRC9Q6ZRR7 1453 aa29.9■■■□□ 2.38
UBE2E1-201ENST00000306627 NUP153P49790 1475 aaKnown RBP29.86■■■□□ 2.37
UBE2E1-201ENST00000306627 EPRSP07814 1512 aaKnown RBP29.86■■■□□ 2.37
UBE2E1-201ENST00000306627 ABCA8O94911 1581 aa29.85■■■□□ 2.37
UBE2E1-201ENST00000306627 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
UBE2E1-201ENST00000306627 PTPRGP23470 1445 aa29.84■■■□□ 2.37
UBE2E1-201ENST00000306627 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
UBE2E1-201ENST00000306627 ARID3CA6NKF2 412 aa29.77■■■□□ 2.36
UBE2E1-201ENST00000306627 MAGI3Q5TCQ9 1506 aa29.77■■■□□ 2.36
UBE2E1-201ENST00000306627 EHBP1L1Q8N3D4 1523 aa29.7■■■□□ 2.35
UBE2E1-201ENST00000306627 MTUS2Q5JR59 1369 aa29.7■■■□□ 2.35
UBE2E1-201ENST00000306627 UACAQ9BZF9 1416 aa29.68■■■□□ 2.34
UBE2E1-201ENST00000306627 ATP10BO94823 1461 aa29.63■■■□□ 2.33
UBE2E1-201ENST00000306627 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
UBE2E1-201ENST00000306627 ABCC2Q92887 1545 aa29.62■■■□□ 2.33
UBE2E1-201ENST00000306627 SUPT6HQ7KZ85 1726 aaKnown RBP29.61■■■□□ 2.33
UBE2E1-201ENST00000306627 RRBP1Q9P2E9 1410 aaKnown RBP29.59■■■□□ 2.33
UBE2E1-201ENST00000306627 NCOA2Q15596 1464 aa29.58■■■□□ 2.33
UBE2E1-201ENST00000306627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.58■■■□□ 2.33
UBE2E1-201ENST00000306627 HNRNPUL2Q1KMD3 747 aaKnown RBP29.58■■■□□ 2.33
UBE2E1-201ENST00000306627 UHRF1BP1LA0JNW5 1464 aa29.54■■■□□ 2.32
UBE2E1-201ENST00000306627 TROQ12816 1431 aaPredicted RBP29.5■■■□□ 2.31
UBE2E1-201ENST00000306627 ADCY10Q96PN6 1610 aa29.5■■■□□ 2.31
UBE2E1-201ENST00000306627 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
UBE2E1-201ENST00000306627 CCNB3Q8WWL7 1395 aa29.48■■■□□ 2.31
UBE2E1-201ENST00000306627 KIF14Q15058 1648 aa29.45■■■□□ 2.31
UBE2E1-201ENST00000306627 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.31
UBE2E1-201ENST00000306627 KDM5BQ9UGL1 1544 aa29.44■■■□□ 2.3
UBE2E1-201ENST00000306627 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
UBE2E1-201ENST00000306627 MYOM3Q5VTT5 1437 aa29.43■■■□□ 2.3
UBE2E1-201ENST00000306627 FGD6Q6ZV73 1430 aa29.41■■■□□ 2.3
UBE2E1-201ENST00000306627 PLEKHD1A6NEE1 506 aa29.4■■■□□ 2.3
UBE2E1-201ENST00000306627 MAPKBP1O60336 1514 aa29.34■■■□□ 2.29
UBE2E1-201ENST00000306627 NPM1P06748 294 aaKnown RBP eCLIP29.32■■■□□ 2.28
UBE2E1-201ENST00000306627 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
UBE2E1-201ENST00000306627 PTPN23Q9H3S7 1636 aa29.31■■■□□ 2.28
UBE2E1-201ENST00000306627 FAM50AQ14320 339 aaKnown RBP29.3■■■□□ 2.28
UBE2E1-201ENST00000306627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.28■■■□□ 2.28
UBE2E1-201ENST00000306627 MIA2Q96PC5 1412 aa29.26■■■□□ 2.27
UBE2E1-201ENST00000306627 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
UBE2E1-201ENST00000306627 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
UBE2E1-201ENST00000306627 GPATCH8Q9UKJ3 1502 aaKnown RBP29.25■■■□□ 2.27
UBE2E1-201ENST00000306627 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
UBE2E1-201ENST00000306627 DIP2BQ9P265 1576 aa29.23■■■□□ 2.27
UBE2E1-201ENST00000306627 ITGAEP38570 1179 aa29.22■■■□□ 2.27
UBE2E1-201ENST00000306627 FAM69CQ0P6D2 419 aa29.2■■■□□ 2.27
UBE2E1-201ENST00000306627 TTC37Q6PGP7 1564 aa29.2■■■□□ 2.26
UBE2E1-201ENST00000306627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.2■■■□□ 2.261e-6■■■□□ 18.8
UBE2E1-201ENST00000306627 WDR7Q9Y4E6 1490 aa29.16■■■□□ 2.26
UBE2E1-201ENST00000306627 KCNH8Q96L42 1107 aa29.15■■■□□ 2.26
UBE2E1-201ENST00000306627 ASXL2Q76L83 1435 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms