RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
UBE2E1-201ENST00000306627 CCDC180Q9P1Z9 1646 aa38.99■■■■□ 3.83
UBE2E1-201ENST00000306627 ABCC9O60706 1549 aa37.93■■■■□ 3.66
UBE2E1-201ENST00000306627 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
UBE2E1-201ENST00000306627 DCAF1Q9Y4B6 1507 aa36.82■■■■□ 3.48
UBE2E1-201ENST00000306627 DCAF8L2P0C7V8 631 aa36.79■■■■□ 3.48
UBE2E1-201ENST00000306627 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
UBE2E1-201ENST00000306627 NACADO15069 1562 aa36.34■■■■□ 3.41
UBE2E1-201ENST00000306627 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
UBE2E1-201ENST00000306627 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
UBE2E1-201ENST00000306627 SCRIBQ14160 1630 aa35.83■■■■□ 3.33
UBE2E1-201ENST00000306627 UNC13AQ9UPW8 1703 aa35.48■■■■□ 3.27
UBE2E1-201ENST00000306627 DNAJC5BQ9UF47 199 aa35.43■■■■□ 3.26
UBE2E1-201ENST00000306627 PABPN1Q86U42 306 aaKnown RBP eCLIP35.3■■■■□ 3.24
UBE2E1-201ENST00000306627 BICRAQ9NZM4 1560 aa35.17■■■■□ 3.22
UBE2E1-201ENST00000306627 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
UBE2E1-201ENST00000306627 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
UBE2E1-201ENST00000306627 RSF1Q96T23 1441 aaPredicted RBP34.46■■■■□ 3.11
UBE2E1-201ENST00000306627 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
UBE2E1-201ENST00000306627 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
UBE2E1-201ENST00000306627 SMARCA4P51532 1647 aa34.33■■■■□ 3.09
UBE2E1-201ENST00000306627 CC2D2AQ9P2K1 1620 aa34.31■■■■□ 3.08
UBE2E1-201ENST00000306627 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
UBE2E1-201ENST00000306627 WIZO95785 1651 aa34.16■■■■□ 3.06
UBE2E1-201ENST00000306627 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
UBE2E1-201ENST00000306627 ATAD2BQ9ULI0 1458 aa33.81■■■■□ 3
UBE2E1-201ENST00000306627 TOP2AP11388 1531 aaKnown RBP33.76■■■■□ 3
UBE2E1-201ENST00000306627 SMARCA2P51531 1590 aa33.75■■■□□ 2.99
UBE2E1-201ENST00000306627 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
UBE2E1-201ENST00000306627 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
UBE2E1-201ENST00000306627 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
UBE2E1-201ENST00000306627 CCDC88BA6NC98 1476 aa33.42■■■□□ 2.94
UBE2E1-201ENST00000306627 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
UBE2E1-201ENST00000306627 CFTRP13569 1480 aa32.73■■■□□ 2.83
UBE2E1-201ENST00000306627 ERCC6Q03468 1493 aa32.73■■■□□ 2.83
UBE2E1-201ENST00000306627 CUX2O14529 1486 aa32.66■■■□□ 2.82
UBE2E1-201ENST00000306627 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
UBE2E1-201ENST00000306627 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
UBE2E1-201ENST00000306627 NESP48681 1621 aa32.64■■■□□ 2.82
UBE2E1-201ENST00000306627 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
UBE2E1-201ENST00000306627 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
UBE2E1-201ENST00000306627 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
UBE2E1-201ENST00000306627 DNAJC5Q9H3Z4 198 aa32.44■■■□□ 2.78
UBE2E1-201ENST00000306627 WRNQ14191 1432 aaPredicted RBP eCLIP32.41■■■□□ 2.78
UBE2E1-201ENST00000306627 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
UBE2E1-201ENST00000306627 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
UBE2E1-201ENST00000306627 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
UBE2E1-201ENST00000306627 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
UBE2E1-201ENST00000306627 PDS5BQ9NTI5 1447 aa32.24■■■□□ 2.75
UBE2E1-201ENST00000306627 CUX1P39880 1505 aa32.22■■■□□ 2.75
UBE2E1-201ENST00000306627 TOP2BQ02880 1626 aa32.22■■■□□ 2.75
UBE2E1-201ENST00000306627 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
UBE2E1-201ENST00000306627 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
UBE2E1-201ENST00000306627 DNMBPQ6XZF7 1577 aa31.99■■■□□ 2.71
UBE2E1-201ENST00000306627 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
UBE2E1-201ENST00000306627 SOGA1O94964 1423 aa31.96■■■□□ 2.71
UBE2E1-201ENST00000306627 FAM9AQ8IZU1 332 aaPredicted RBP31.96■■■□□ 2.71
UBE2E1-201ENST00000306627 URB2Q14146 1524 aaKnown RBP31.96■■■□□ 2.71
UBE2E1-201ENST00000306627 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
UBE2E1-201ENST00000306627 WDR62O43379 1518 aa31.91■■■□□ 2.7
UBE2E1-201ENST00000306627 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
UBE2E1-201ENST00000306627 FGD5Q6ZNL6 1462 aa31.89■■■□□ 2.69
UBE2E1-201ENST00000306627 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
UBE2E1-201ENST00000306627 EEA1Q15075 1411 aa31.76■■■□□ 2.67
UBE2E1-201ENST00000306627 LOC105371045A0A1W2PR82 267 aa31.75■■■□□ 2.67
UBE2E1-201ENST00000306627 RAD54L2Q9Y4B4 1467 aa31.68■■■□□ 2.66
UBE2E1-201ENST00000306627 CSRNP3Q8WYN3 585 aa31.63■■■□□ 2.65
UBE2E1-201ENST00000306627 KIF27Q86VH2 1401 aa31.59■■■□□ 2.65
UBE2E1-201ENST00000306627 ABCA10Q8WWZ4 1543 aa31.58■■■□□ 2.65
UBE2E1-201ENST00000306627 WDR97A6NE52 1622 aa31.58■■■□□ 2.65
UBE2E1-201ENST00000306627 EHMT2Q96KQ7 1210 aa31.54■■■□□ 2.64
UBE2E1-201ENST00000306627 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
UBE2E1-201ENST00000306627 KIF21BO75037 1637 aa31.44■■■□□ 2.62
UBE2E1-201ENST00000306627 ABCA5Q8WWZ7 1642 aa31.39■■■□□ 2.62
UBE2E1-201ENST00000306627 IGF1RP08069 1367 aa31.37■■■□□ 2.61
UBE2E1-201ENST00000306627 TDRD9Q8NDG6 1382 aaKnown RBP31.36■■■□□ 2.61
UBE2E1-201ENST00000306627 IFT140Q96RY7 1462 aa31.36■■■□□ 2.61
UBE2E1-201ENST00000306627 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
UBE2E1-201ENST00000306627 GOLGA3Q08378 1498 aa31.35■■■□□ 2.61
UBE2E1-201ENST00000306627 RAPGEF2Q9Y4G8 1499 aa31.32■■■□□ 2.6
UBE2E1-201ENST00000306627 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
UBE2E1-201ENST00000306627 ERICH3Q5RHP9 1530 aa31.26■■■□□ 2.59
UBE2E1-201ENST00000306627 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
UBE2E1-201ENST00000306627 AQRO60306 1485 aaKnown RBP eCLIP31.23■■■□□ 2.592e-9■■■■□ 26.7
UBE2E1-201ENST00000306627 PBRM1Q86U86 1689 aa31.2■■■□□ 2.58
UBE2E1-201ENST00000306627 TNIKQ9UKE5 1360 aa31.2■■■□□ 2.58
UBE2E1-201ENST00000306627 CARMIL1Q5VZK9 1371 aa31.19■■■□□ 2.58
UBE2E1-201ENST00000306627 UBTFP17480 764 aaKnown RBP31.18■■■□□ 2.58
UBE2E1-201ENST00000306627 CUL7Q14999 1698 aa31.17■■■□□ 2.58
UBE2E1-201ENST00000306627 OSCARQ8IYS5 282 aa31.15■■■□□ 2.58
UBE2E1-201ENST00000306627 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
UBE2E1-201ENST00000306627 GRIN2BQ13224 1484 aa31.07■■■□□ 2.56
UBE2E1-201ENST00000306627 CEP162Q5TB80 1403 aa31.03■■■□□ 2.56
UBE2E1-201ENST00000306627 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
UBE2E1-201ENST00000306627 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
UBE2E1-201ENST00000306627 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
UBE2E1-201ENST00000306627 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
UBE2E1-201ENST00000306627 CLIP1P30622 1438 aa30.84■■■□□ 2.53
UBE2E1-201ENST00000306627 CTTNBP2Q8WZ74 1663 aa30.82■■■□□ 2.52
UBE2E1-201ENST00000306627 RANGAP1P46060 587 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms