RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
TEFM-201ENST00000306049 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
TEFM-201ENST00000306049 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
TEFM-201ENST00000306049 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
TEFM-201ENST00000306049 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
TEFM-201ENST00000306049 FHAD1B1AJZ9 1412 aa17.15■□□□□ 0.34
TEFM-201ENST00000306049 KDM6BO15054 1643 aa17.15■□□□□ 0.34
TEFM-201ENST00000306049 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
TEFM-201ENST00000306049 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
TEFM-201ENST00000306049 DIP2BQ9P265 1576 aa17.1■□□□□ 0.33
TEFM-201ENST00000306049 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
TEFM-201ENST00000306049 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
TEFM-201ENST00000306049 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
TEFM-201ENST00000306049 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
TEFM-201ENST00000306049 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
TEFM-201ENST00000306049 ADCY10Q96PN6 1610 aa17■□□□□ 0.31
TEFM-201ENST00000306049 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
TEFM-201ENST00000306049 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
TEFM-201ENST00000306049 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
TEFM-201ENST00000306049 CUL7Q14999 1698 aa16.86■□□□□ 0.29
TEFM-201ENST00000306049 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
TEFM-201ENST00000306049 PPRC1Q5VV67 1664 aaKnown RBP16.81■□□□□ 0.28
TEFM-201ENST00000306049 IGF1RP08069 1367 aa16.8■□□□□ 0.28
TEFM-201ENST00000306049 MSH5O43196 834 aa16.8■□□□□ 0.28
TEFM-201ENST00000306049 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
TEFM-201ENST00000306049 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
TEFM-201ENST00000306049 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
TEFM-201ENST00000306049 PTPRGP23470 1445 aa16.78■□□□□ 0.28
TEFM-201ENST00000306049 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
TEFM-201ENST00000306049 GLI2P10070 1586 aa16.77■□□□□ 0.28
TEFM-201ENST00000306049 PLB1Q6P1J6 1458 aa16.77■□□□□ 0.28
TEFM-201ENST00000306049 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
TEFM-201ENST00000306049 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
TEFM-201ENST00000306049 ADRA2BP18089 450 aa16.72■□□□□ 0.27
TEFM-201ENST00000306049 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
TEFM-201ENST00000306049 TEX14Q8IWB6 1497 aa16.7■□□□□ 0.26
TEFM-201ENST00000306049 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
TEFM-201ENST00000306049 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
TEFM-201ENST00000306049 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
TEFM-201ENST00000306049 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
TEFM-201ENST00000306049 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
TEFM-201ENST00000306049 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
TEFM-201ENST00000306049 UHRF1BP1LA0JNW5 1464 aa16.65■□□□□ 0.26
TEFM-201ENST00000306049 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
TEFM-201ENST00000306049 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
TEFM-201ENST00000306049 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
TEFM-201ENST00000306049 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
TEFM-201ENST00000306049 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
TEFM-201ENST00000306049 UGGT2Q9NYU1 1516 aa16.56■□□□□ 0.24
TEFM-201ENST00000306049 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
TEFM-201ENST00000306049 KIF21BO75037 1637 aa16.53■□□□□ 0.24
TEFM-201ENST00000306049 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.23
TEFM-201ENST00000306049 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
TEFM-201ENST00000306049 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
TEFM-201ENST00000306049 CD109Q6YHK3 1445 aa16.48■□□□□ 0.23
TEFM-201ENST00000306049 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
TEFM-201ENST00000306049 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
TEFM-201ENST00000306049 PTPRMP28827 1452 aa16.47■□□□□ 0.23
TEFM-201ENST00000306049 KCNH8Q96L42 1107 aa16.46■□□□□ 0.23
TEFM-201ENST00000306049 SOCS7O14512 581 aa16.42■□□□□ 0.22
TEFM-201ENST00000306049 ABCA8O94911 1581 aa16.42■□□□□ 0.22
TEFM-201ENST00000306049 ADAMTSL3P82987 1691 aa16.41■□□□□ 0.22
TEFM-201ENST00000306049 PCF11O94913 1555 aaKnown RBP16.41■□□□□ 0.22
TEFM-201ENST00000306049 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
TEFM-201ENST00000306049 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
TEFM-201ENST00000306049 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
TEFM-201ENST00000306049 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
TEFM-201ENST00000306049 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
TEFM-201ENST00000306049 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
TEFM-201ENST00000306049 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.2
TEFM-201ENST00000306049 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
TEFM-201ENST00000306049 HSPA2P54652 639 aa16.3■□□□□ 0.2
TEFM-201ENST00000306049 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
TEFM-201ENST00000306049 RAPGEF3O95398 923 aa16.28■□□□□ 0.2
TEFM-201ENST00000306049 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
TEFM-201ENST00000306049 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.19
TEFM-201ENST00000306049 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.19
TEFM-201ENST00000306049 ATP10BO94823 1461 aa16.24■□□□□ 0.19
TEFM-201ENST00000306049 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
TEFM-201ENST00000306049 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
TEFM-201ENST00000306049 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
TEFM-201ENST00000306049 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
TEFM-201ENST00000306049 SAMD9Q5K651 1589 aa16.2■□□□□ 0.18
TEFM-201ENST00000306049 NEO1Q92859 1461 aa16.19■□□□□ 0.18
TEFM-201ENST00000306049 FRMPD1Q5SYB0 1578 aa16.18■□□□□ 0.18
TEFM-201ENST00000306049 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
TEFM-201ENST00000306049 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
TEFM-201ENST00000306049 POGZQ7Z3K3 1410 aa16.14■□□□□ 0.17
TEFM-201ENST00000306049 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
TEFM-201ENST00000306049 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
TEFM-201ENST00000306049 FANCAO15360 1455 aa16.11■□□□□ 0.17
TEFM-201ENST00000306049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
TEFM-201ENST00000306049 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
TEFM-201ENST00000306049 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
TEFM-201ENST00000306049 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
TEFM-201ENST00000306049 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
TEFM-201ENST00000306049 MLECQ14165 292 aa16.08■□□□□ 0.16
TEFM-201ENST00000306049 AKNAQ7Z591 1439 aa16.08■□□□□ 0.16
TEFM-201ENST00000306049 CFAP74Q9C0B2 1584 aa16.08■□□□□ 0.16
TEFM-201ENST00000306049 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms