RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
TEFM-201ENST00000306049 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
TEFM-201ENST00000306049 ABCC9O60706 1549 aa22.35■■□□□ 1.17
TEFM-201ENST00000306049 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
TEFM-201ENST00000306049 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
TEFM-201ENST00000306049 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
TEFM-201ENST00000306049 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
TEFM-201ENST00000306049 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
TEFM-201ENST00000306049 NACADO15069 1562 aa20.68■□□□□ 0.9
TEFM-201ENST00000306049 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
TEFM-201ENST00000306049 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
TEFM-201ENST00000306049 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
TEFM-201ENST00000306049 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
TEFM-201ENST00000306049 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
TEFM-201ENST00000306049 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
TEFM-201ENST00000306049 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
TEFM-201ENST00000306049 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
TEFM-201ENST00000306049 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
TEFM-201ENST00000306049 EIF4G1Q04637 1599 aaKnown RBP19.94■□□□□ 0.78
TEFM-201ENST00000306049 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
TEFM-201ENST00000306049 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
TEFM-201ENST00000306049 CUX2O14529 1486 aa19.52■□□□□ 0.72
TEFM-201ENST00000306049 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
TEFM-201ENST00000306049 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
TEFM-201ENST00000306049 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
TEFM-201ENST00000306049 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
TEFM-201ENST00000306049 NESP48681 1621 aa19■□□□□ 0.63
TEFM-201ENST00000306049 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
TEFM-201ENST00000306049 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
TEFM-201ENST00000306049 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
TEFM-201ENST00000306049 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
TEFM-201ENST00000306049 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
TEFM-201ENST00000306049 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
TEFM-201ENST00000306049 BAZ1BQ9UIG0 1483 aaKnown RBP18.78■□□□□ 0.6
TEFM-201ENST00000306049 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
TEFM-201ENST00000306049 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
TEFM-201ENST00000306049 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
TEFM-201ENST00000306049 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
TEFM-201ENST00000306049 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
TEFM-201ENST00000306049 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
TEFM-201ENST00000306049 OSCARQ8IYS5 282 aa18.57■□□□□ 0.56
TEFM-201ENST00000306049 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
TEFM-201ENST00000306049 WDR62O43379 1518 aa18.52■□□□□ 0.56
TEFM-201ENST00000306049 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
TEFM-201ENST00000306049 WIZO95785 1651 aa18.42■□□□□ 0.54
TEFM-201ENST00000306049 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
TEFM-201ENST00000306049 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
TEFM-201ENST00000306049 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
TEFM-201ENST00000306049 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
TEFM-201ENST00000306049 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
TEFM-201ENST00000306049 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
TEFM-201ENST00000306049 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
TEFM-201ENST00000306049 CFTRP13569 1480 aa18.2■□□□□ 0.5
TEFM-201ENST00000306049 CYB5RLQ6IPT4 315 aa18.18■□□□□ 0.5
TEFM-201ENST00000306049 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
TEFM-201ENST00000306049 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
TEFM-201ENST00000306049 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
TEFM-201ENST00000306049 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
TEFM-201ENST00000306049 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
TEFM-201ENST00000306049 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
TEFM-201ENST00000306049 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
TEFM-201ENST00000306049 CHD1O14646 1710 aa17.93■□□□□ 0.46
TEFM-201ENST00000306049 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
TEFM-201ENST00000306049 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
TEFM-201ENST00000306049 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
TEFM-201ENST00000306049 FBLN2P98095 1184 aa17.9■□□□□ 0.46
TEFM-201ENST00000306049 FOXD1Q16676 465 aa17.85■□□□□ 0.45
TEFM-201ENST00000306049 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
TEFM-201ENST00000306049 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.45
TEFM-201ENST00000306049 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
TEFM-201ENST00000306049 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
TEFM-201ENST00000306049 POLA1P09884 1462 aaPredicted RBP17.7■□□□□ 0.42
TEFM-201ENST00000306049 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
TEFM-201ENST00000306049 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
TEFM-201ENST00000306049 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
TEFM-201ENST00000306049 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
TEFM-201ENST00000306049 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
TEFM-201ENST00000306049 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
TEFM-201ENST00000306049 SOGA1O94964 1423 aa17.6■□□□□ 0.41
TEFM-201ENST00000306049 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
TEFM-201ENST00000306049 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
TEFM-201ENST00000306049 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
TEFM-201ENST00000306049 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
TEFM-201ENST00000306049 CUX1P39880 1505 aa17.51■□□□□ 0.39
TEFM-201ENST00000306049 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
TEFM-201ENST00000306049 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
TEFM-201ENST00000306049 GRIN2BQ13224 1484 aa17.49■□□□□ 0.39
TEFM-201ENST00000306049 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
TEFM-201ENST00000306049 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
TEFM-201ENST00000306049 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
TEFM-201ENST00000306049 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
TEFM-201ENST00000306049 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
TEFM-201ENST00000306049 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
TEFM-201ENST00000306049 GRIN2AQ12879 1464 aa17.27■□□□□ 0.36
TEFM-201ENST00000306049 KDM4FA0A1W2PPD8 638 aa17.26■□□□□ 0.35
TEFM-201ENST00000306049 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
TEFM-201ENST00000306049 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
TEFM-201ENST00000306049 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
TEFM-201ENST00000306049 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
TEFM-201ENST00000306049 NUP160Q12769 1436 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms