RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SHROOM2Q13796 1616 aa30.69■■■□□ 2.5
SPSB3-201ENST00000301717 JPH4Q96JJ6 628 aa30.67■■■□□ 2.5
SPSB3-201ENST00000301717 RAPGEF2Q9Y4G8 1499 aa30.66■■■□□ 2.5
SPSB3-201ENST00000301717 KIAA0586Q9BVV6 1533 aa30.64■■■□□ 2.5
SPSB3-201ENST00000301717 PRG4Q92954 1404 aaPredicted RBP30.64■■■□□ 2.5
SPSB3-201ENST00000301717 FAM9AQ8IZU1 332 aaPredicted RBP30.62■■■□□ 2.49
SPSB3-201ENST00000301717 PRXQ9BXM0 1461 aa30.57■■■□□ 2.48
SPSB3-201ENST00000301717 CSRNP3Q8WYN3 585 aa30.55■■■□□ 2.48
SPSB3-201ENST00000301717 IQGAP2Q13576 1575 aa30.48■■■□□ 2.47
SPSB3-201ENST00000301717 EEA1Q15075 1411 aa30.46■■■□□ 2.47
SPSB3-201ENST00000301717 TTBK1Q5TCY1 1321 aaPredicted RBP30.38■■■□□ 2.45
SPSB3-201ENST00000301717 DISP1Q96F81 1524 aa30.33■■■□□ 2.45
SPSB3-201ENST00000301717 CTTNBP2Q8WZ74 1663 aa30.32■■■□□ 2.44
SPSB3-201ENST00000301717 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
SPSB3-201ENST00000301717 UGGT2Q9NYU1 1516 aa30.3■■■□□ 2.44
SPSB3-201ENST00000301717 CARMIL2Q6F5E8 1435 aa30.29■■■□□ 2.44
SPSB3-201ENST00000301717 TNIKQ9UKE5 1360 aa30.24■■■□□ 2.43
SPSB3-201ENST00000301717 PTPRGP23470 1445 aa30.24■■■□□ 2.43
SPSB3-201ENST00000301717 KIAA0556O60303 1618 aa30.2■■■□□ 2.43
SPSB3-201ENST00000301717 KIF21BO75037 1637 aa30.2■■■□□ 2.43
SPSB3-201ENST00000301717 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
SPSB3-201ENST00000301717 ADCY10Q96PN6 1610 aa30.16■■■□□ 2.42
SPSB3-201ENST00000301717 RANGAP1P46060 587 aaPredicted RBP30.15■■■□□ 2.42
SPSB3-201ENST00000301717 P3H3Q8IVL6 736 aa30.11■■■□□ 2.41
SPSB3-201ENST00000301717 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
SPSB3-201ENST00000301717 UBTFP17480 764 aaKnown RBP30.05■■■□□ 2.4
SPSB3-201ENST00000301717 UACAQ9BZF9 1416 aa30.02■■■□□ 2.4
SPSB3-201ENST00000301717 NPM1P06748 294 aaKnown RBP eCLIP30.01■■■□□ 2.39
SPSB3-201ENST00000301717 SAMD9Q5K651 1589 aa29.98■■■□□ 2.39
SPSB3-201ENST00000301717 PLB1Q6P1J6 1458 aa29.98■■■□□ 2.39
SPSB3-201ENST00000301717 ABCC2Q92887 1545 aa29.96■■■□□ 2.39
SPSB3-201ENST00000301717 UHRF1BP1LA0JNW5 1464 aa29.95■■■□□ 2.38
SPSB3-201ENST00000301717 FHOD3Q2V2M9 1422 aa29.92■■■□□ 2.38
SPSB3-201ENST00000301717 MAPKBP1O60336 1514 aa29.9■■■□□ 2.38
SPSB3-201ENST00000301717 ABCA8O94911 1581 aa29.87■■■□□ 2.37
SPSB3-201ENST00000301717 ARID3CA6NKF2 412 aa29.84■■■□□ 2.37
SPSB3-201ENST00000301717 KDM5BQ9UGL1 1544 aa29.83■■■□□ 2.37
SPSB3-201ENST00000301717 ABCC10Q5T3U5 1492 aa29.81■■■□□ 2.36
SPSB3-201ENST00000301717 ASXL2Q76L83 1435 aa29.8■■■□□ 2.36
SPSB3-201ENST00000301717 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
SPSB3-201ENST00000301717 ZCCHC11Q5TAX3 1644 aaKnown RBP29.8■■■□□ 2.36
SPSB3-201ENST00000301717 EFCAB5A4FU69 1503 aa29.79■■■□□ 2.36
SPSB3-201ENST00000301717 KIF13AQ9H1H9 1805 aa29.79■■■□□ 2.36
SPSB3-201ENST00000301717 DIP2BQ9P265 1576 aa29.78■■■□□ 2.36
SPSB3-201ENST00000301717 ARHGAP35Q9NRY4 1499 aa29.76■■■□□ 2.35
SPSB3-201ENST00000301717 RAPGEF6Q8TEU7 1601 aa29.7■■■□□ 2.34
SPSB3-201ENST00000301717 ATP10BO94823 1461 aa29.66■■■□□ 2.34
SPSB3-201ENST00000301717 NUP153P49790 1475 aaKnown RBP29.65■■■□□ 2.34
SPSB3-201ENST00000301717 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
SPSB3-201ENST00000301717 EPRSP07814 1512 aaKnown RBP29.62■■■□□ 2.33
SPSB3-201ENST00000301717 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
SPSB3-201ENST00000301717 KCNH8Q96L42 1107 aa29.58■■■□□ 2.33
SPSB3-201ENST00000301717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.57■■■□□ 2.32
SPSB3-201ENST00000301717 HNRNPUL2Q1KMD3 747 aaKnown RBP29.57■■■□□ 2.32
SPSB3-201ENST00000301717 CLIP1P30622 1438 aa29.56■■■□□ 2.32
SPSB3-201ENST00000301717 TSPOAP1O95153 1857 aa29.54■■■□□ 2.32
SPSB3-201ENST00000301717 GLI2P10070 1586 aa29.54■■■□□ 2.32
SPSB3-201ENST00000301717 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
SPSB3-201ENST00000301717 FMN1Q68DA7 1419 aa29.52■■■□□ 2.32
SPSB3-201ENST00000301717 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
SPSB3-201ENST00000301717 CEP162Q5TB80 1403 aa29.44■■■□□ 2.3
SPSB3-201ENST00000301717 PPRC1Q5VV67 1664 aaKnown RBP29.44■■■□□ 2.3
SPSB3-201ENST00000301717 MAP3K4Q9Y6R4 1608 aa29.43■■■□□ 2.3
SPSB3-201ENST00000301717 HECW1Q76N89 1606 aa29.41■■■□□ 2.3
SPSB3-201ENST00000301717 PCF11O94913 1555 aaKnown RBP29.4■■■□□ 2.3
SPSB3-201ENST00000301717 PLEKHD1A6NEE1 506 aa29.36■■■□□ 2.29
SPSB3-201ENST00000301717 CD109Q6YHK3 1445 aa29.36■■■□□ 2.29
SPSB3-201ENST00000301717 CASKIN1Q8WXD9 1431 aa29.34■■■□□ 2.29
SPSB3-201ENST00000301717 LRRIQ1Q96JM4 1722 aa29.32■■■□□ 2.28
SPSB3-201ENST00000301717 CFAP43Q8NDM7 1665 aa29.3■■■□□ 2.28
SPSB3-201ENST00000301717 KDM6BO15054 1643 aa29.29■■■□□ 2.28
SPSB3-201ENST00000301717 ABCA9Q8IUA7 1624 aa29.27■■■□□ 2.28
SPSB3-201ENST00000301717 TEX14Q8IWB6 1497 aa29.26■■■□□ 2.27
SPSB3-201ENST00000301717 MAGI3Q5TCQ9 1506 aa29.26■■■□□ 2.27
SPSB3-201ENST00000301717 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
SPSB3-201ENST00000301717 COL17A1Q9UMD9 1497 aaPredicted RBP29.25■■■□□ 2.27
SPSB3-201ENST00000301717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.2■■■□□ 2.27
SPSB3-201ENST00000301717 TTC37Q6PGP7 1564 aa29.19■■■□□ 2.26
SPSB3-201ENST00000301717 CCDC18Q5T9S5 1454 aa29.17■■■□□ 2.26
SPSB3-201ENST00000301717 CDK11AQ9UQ88 783 aaPredicted RBP29.17■■■□□ 2.26
SPSB3-201ENST00000301717 TROQ12816 1431 aaPredicted RBP29.16■■■□□ 2.26
SPSB3-201ENST00000301717 KIF14Q15058 1648 aa29.16■■■□□ 2.26
SPSB3-201ENST00000301717 VPS8Q8N3P4 1428 aa29.04■■■□□ 2.24
SPSB3-201ENST00000301717 FANCAO15360 1455 aa29.02■■■□□ 2.24
SPSB3-201ENST00000301717 NEO1Q92859 1461 aa29.01■■■□□ 2.23
SPSB3-201ENST00000301717 PLCH2O75038 1416 aa29■■■□□ 2.23
SPSB3-201ENST00000301717 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
SPSB3-201ENST00000301717 RAPGEF3O95398 923 aa28.99■■■□□ 2.23
SPSB3-201ENST00000301717 AKNAQ7Z591 1439 aa28.97■■■□□ 2.23
SPSB3-201ENST00000301717 MTUS2Q5JR59 1369 aa28.95■■■□□ 2.22
SPSB3-201ENST00000301717 PHLDB1Q86UU1 1377 aa28.94■■■□□ 2.22
SPSB3-201ENST00000301717 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
SPSB3-201ENST00000301717 FRMPD1Q5SYB0 1578 aa28.9■■■□□ 2.22
SPSB3-201ENST00000301717 ARHGAP5Q13017 1502 aa28.9■■■□□ 2.22
SPSB3-201ENST00000301717 CFAP74Q9C0B2 1584 aa28.89■■■□□ 2.21
SPSB3-201ENST00000301717 EFCAB2Q5VUJ9 269 aa28.88■■■□□ 2.21
SPSB3-201ENST00000301717 ADGRL1O94910 1474 aa28.87■■■□□ 2.21
SPSB3-201ENST00000301717 TIAM1Q13009 1591 aa28.86■■■□□ 2.21
SPSB3-201ENST00000301717 DENND4BO75064 1496 aaPredicted RBP28.86■■■□□ 2.21
SPSB3-201ENST00000301717 EHBP1L1Q8N3D4 1523 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms