RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.59■□□□□ 0.734e-7■■■■■ 420.8
SPSB3-201ENST00000301717 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.04■■□□□ 1.122e-17■■■■■ 95.5
SPSB3-201ENST00000301717 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.692e-8■■■■■ 44.6
SPSB3-201ENST00000301717 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.29■■□□□ 18e-12■■■■■ 36
SPSB3-201ENST00000301717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.31■□□□□ 0.042e-8■■■■■ 31.8
SPSB3-201ENST00000301717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.35■□□□□ 0.053e-10■■■■■ 30.2
SPSB3-201ENST00000301717 DDX6P26196 483 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■■□ 26.3
SPSB3-201ENST00000301717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.21■□□□□ 0.351e-10■■■■□ 24.5
SPSB3-201ENST00000301717 EFTUD2Q15029 972 aaKnown RBP eCLIP17.57■□□□□ 0.48e-9■■■■□ 20.6
SPSB3-201ENST00000301717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.13■■□□□ 1.131e-7■■■□□ 19
SPSB3-201ENST00000301717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.84■■■□□ 2.051e-6■■■□□ 17.1
SPSB3-201ENST00000301717 SF3B4Q15427 424 aaKnown RBP eCLIP16.36■□□□□ 0.211e-6■■□□□ 13.7
SPSB3-201ENST00000301717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.84■■■□□ 2.052e-6■■□□□ 13.2
SPSB3-201ENST00000301717 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.892e-25■■□□□ 13
SPSB3-201ENST00000301717 PPIGQ13427 754 aaKnown RBP eCLIP20.6■□□□□ 0.896e-7■■□□□ 11.8
SPSB3-201ENST00000301717 RBM15Q96T37 977 aaKnown RBP eCLIP18.31■□□□□ 0.528e-6■□□□□ 11.1
SPSB3-201ENST00000301717 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■□□□□ 10.8
SPSB3-201ENST00000301717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■□□□□ 9.8
SPSB3-201ENST00000301717 ZNF622Q969S3 477 aaKnown RBP eCLIP23.46■■□□□ 1.353e-9■□□□□ 9
Retrieved 19 of 19 RNA–protein pairs in 8.6 ms