RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 APLP2Q06481 763 aa39.64■■■■□ 3.94
SDCCAG3-201ENST00000298537 CTTNBP2Q8WZ74 1663 aa39.59■■■■□ 3.93
SDCCAG3-201ENST00000298537 GRIN2BQ13224 1484 aa39.58■■■■□ 3.93
SDCCAG3-201ENST00000298537 FHAD1B1AJZ9 1412 aa39.53■■■■□ 3.92
SDCCAG3-201ENST00000298537 ADAMTS12P58397 1594 aa39.53■■■■□ 3.92
SDCCAG3-201ENST00000298537 KANK4Q5T7N3 995 aaPredicted RBP39.52■■■■□ 3.92
SDCCAG3-201ENST00000298537 EIF4G3O43432 1585 aaKnown RBP39.51■■■■□ 3.92
SDCCAG3-201ENST00000298537 FHOD3Q2V2M9 1422 aa39.5■■■■□ 3.91
SDCCAG3-201ENST00000298537 SNAPC4Q5SXM2 1469 aa39.42■■■■□ 3.9
SDCCAG3-201ENST00000298537 EFCAB5A4FU69 1503 aa39.34■■■■□ 3.89
SDCCAG3-201ENST00000298537 PCF11O94913 1555 aaKnown RBP39.28■■■■□ 3.88
SDCCAG3-201ENST00000298537 ATP1B4Q9UN42 357 aaPredicted RBP39.26■■■■□ 3.88
SDCCAG3-201ENST00000298537 SAMD9Q5K651 1589 aa39.24■■■■□ 3.87
SDCCAG3-201ENST00000298537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.18■■■■□ 3.86
SDCCAG3-201ENST00000298537 TIAM1Q13009 1591 aa39.17■■■■□ 3.86
SDCCAG3-201ENST00000298537 GRIN2AQ12879 1464 aa39.17■■■■□ 3.86
SDCCAG3-201ENST00000298537 IQGAP2Q13576 1575 aa39.17■■■■□ 3.86
SDCCAG3-201ENST00000298537 HNRNPUL2Q1KMD3 747 aaKnown RBP39.14■■■■□ 3.86
SDCCAG3-201ENST00000298537 FBLN2P98095 1184 aa39.13■■■■□ 3.86
SDCCAG3-201ENST00000298537 MAGI1Q96QZ7 1491 aaPredicted RBP39.13■■■■□ 3.85
SDCCAG3-201ENST00000298537 CHMP7Q8WUX9 453 aaPredicted RBP39.1■■■■□ 3.85
SDCCAG3-201ENST00000298537 CASKIN1Q8WXD9 1431 aa39.09■■■■□ 3.85
SDCCAG3-201ENST00000298537 FMN1Q68DA7 1419 aa39.07■■■■□ 3.84
SDCCAG3-201ENST00000298537 SYNJ2O15056 1496 aa39.06■■■■□ 3.84
SDCCAG3-201ENST00000298537 FYCO1Q9BQS8 1478 aa39.06■■■■□ 3.84
SDCCAG3-201ENST00000298537 MAP3K1Q13233 1512 aa39.04■■■■□ 3.84
SDCCAG3-201ENST00000298537 LRRC9Q6ZRR7 1453 aa39.03■■■■□ 3.84
SDCCAG3-201ENST00000298537 KIAA0586Q9BVV6 1533 aa39■■■■□ 3.83
SDCCAG3-201ENST00000298537 CFAP43Q8NDM7 1665 aa38.98■■■■□ 3.83
SDCCAG3-201ENST00000298537 CEP170Q5SW79 1584 aa38.98■■■■□ 3.83
SDCCAG3-201ENST00000298537 UGGT2Q9NYU1 1516 aa38.94■■■■□ 3.82
SDCCAG3-201ENST00000298537 CCER1Q8TC90 406 aaPredicted RBP38.91■■■■□ 3.82
SDCCAG3-201ENST00000298537 LRRIQ1Q96JM4 1722 aa38.9■■■■□ 3.82
SDCCAG3-201ENST00000298537 RRBP1Q9P2E9 1410 aaKnown RBP38.88■■■■□ 3.81
SDCCAG3-201ENST00000298537 DISP1Q96F81 1524 aa38.87■■■■□ 3.81
SDCCAG3-201ENST00000298537 PHLDB1Q86UU1 1377 aa38.85■■■■□ 3.81
SDCCAG3-201ENST00000298537 NUP160Q12769 1436 aa38.82■■■■□ 3.8
SDCCAG3-201ENST00000298537 ZEB1P37275 1124 aaPredicted RBP38.8■■■■□ 3.8
SDCCAG3-201ENST00000298537 KIAA0556O60303 1618 aa38.79■■■■□ 3.8
SDCCAG3-201ENST00000298537 CCNB3Q8WWL7 1395 aa38.79■■■■□ 3.8
SDCCAG3-201ENST00000298537 ARID3CA6NKF2 412 aa38.75■■■■□ 3.79
SDCCAG3-201ENST00000298537 ITGAEP38570 1179 aa38.7■■■■□ 3.79
SDCCAG3-201ENST00000298537 JPH4Q96JJ6 628 aa38.69■■■■□ 3.78
SDCCAG3-201ENST00000298537 MTUS2Q5JR59 1369 aa38.67■■■■□ 3.78
SDCCAG3-201ENST00000298537 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.77
SDCCAG3-201ENST00000298537 CDK13Q14004 1512 aaKnown RBP38.61■■■■□ 3.77
SDCCAG3-201ENST00000298537 HECW1Q76N89 1606 aa38.61■■■■□ 3.77
SDCCAG3-201ENST00000298537 CHD1O14646 1710 aa38.59■■■■□ 3.77
SDCCAG3-201ENST00000298537 EPRSP07814 1512 aaKnown RBP38.59■■■■□ 3.77
SDCCAG3-201ENST00000298537 FAM50AQ14320 339 aaKnown RBP38.56■■■■□ 3.76
SDCCAG3-201ENST00000298537 CCDC18Q5T9S5 1454 aa38.52■■■■□ 3.76
SDCCAG3-201ENST00000298537 NCOA2Q15596 1464 aa38.49■■■■□ 3.75
SDCCAG3-201ENST00000298537 NUP153P49790 1475 aaKnown RBP38.48■■■■□ 3.75
SDCCAG3-201ENST00000298537 PLB1Q6P1J6 1458 aa38.47■■■■□ 3.75
SDCCAG3-201ENST00000298537 EHBP1L1Q8N3D4 1523 aa38.46■■■■□ 3.75
SDCCAG3-201ENST00000298537 CARMIL2Q6F5E8 1435 aa38.45■■■■□ 3.75
SDCCAG3-201ENST00000298537 RAPGEF6Q8TEU7 1601 aa38.44■■■■□ 3.74
SDCCAG3-201ENST00000298537 FGD6Q6ZV73 1430 aa38.4■■■■□ 3.74
SDCCAG3-201ENST00000298537 SUPT6HQ7KZ85 1726 aaKnown RBP38.38■■■■□ 3.73
SDCCAG3-201ENST00000298537 PRG4Q92954 1404 aaPredicted RBP38.38■■■■□ 3.73
SDCCAG3-201ENST00000298537 ARHGEF11O15085 1522 aa38.33■■■■□ 3.73
SDCCAG3-201ENST00000298537 MYOM3Q5VTT5 1437 aa38.32■■■■□ 3.72
SDCCAG3-201ENST00000298537 DHX57Q6P158 1386 aaKnown RBP38.23■■■■□ 3.71
SDCCAG3-201ENST00000298537 RAB3GAP2Q9H2M9 1393 aa38.21■■■■□ 3.71
SDCCAG3-201ENST00000298537 ERCC6L2Q5T890 1561 aa38.2■■■■□ 3.71
SDCCAG3-201ENST00000298537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.2■■■■□ 3.71
SDCCAG3-201ENST00000298537 ABCA8O94911 1581 aa38.18■■■■□ 3.7
SDCCAG3-201ENST00000298537 PTPRKQ15262 1439 aa38.17■■■■□ 3.7
SDCCAG3-201ENST00000298537 SHROOM2Q13796 1616 aa38.17■■■■□ 3.7
SDCCAG3-201ENST00000298537 PTPRGP23470 1445 aa38.15■■■■□ 3.7
SDCCAG3-201ENST00000298537 PTPN23Q9H3S7 1636 aa38.13■■■■□ 3.69
SDCCAG3-201ENST00000298537 SETD5Q9C0A6 1442 aa38.12■■■■□ 3.69
SDCCAG3-201ENST00000298537 CDK11AQ9UQ88 783 aaPredicted RBP38.09■■■■□ 3.69
SDCCAG3-201ENST00000298537 CLASP1Q7Z460 1538 aa38.07■■■■□ 3.68
SDCCAG3-201ENST00000298537 ATP10BO94823 1461 aa38.06■■■■□ 3.68
SDCCAG3-201ENST00000298537 TROQ12816 1431 aaPredicted RBP38.05■■■■□ 3.68
SDCCAG3-201ENST00000298537 TCOF1Q13428 1488 aaKnown RBP38■■■■□ 3.67
SDCCAG3-201ENST00000298537 KIF14Q15058 1648 aa38■■■■□ 3.67
SDCCAG3-201ENST00000298537 ZNF644Q9H582 1327 aaPredicted RBP37.97■■■■□ 3.67
SDCCAG3-201ENST00000298537 MIA2Q96PC5 1412 aa37.95■■■■□ 3.67
SDCCAG3-201ENST00000298537 CHIC2Q9UKJ5 165 aa37.93■■■■□ 3.66
SDCCAG3-201ENST00000298537 UACAQ9BZF9 1416 aa37.9■■■■□ 3.66
SDCCAG3-201ENST00000298537 PLEKHD1A6NEE1 506 aa37.9■■■■□ 3.66
SDCCAG3-201ENST00000298537 HFM1A2PYH4 1435 aa37.84■■■■□ 3.65
SDCCAG3-201ENST00000298537 CLSPNQ9HAW4 1339 aa37.84■■■■□ 3.65
SDCCAG3-201ENST00000298537 ADCY10Q96PN6 1610 aa37.83■■■■□ 3.65
SDCCAG3-201ENST00000298537 RRP7BPQ9NSQ0 103 aa37.83■■■■□ 3.65
SDCCAG3-201ENST00000298537 MAPKBP1O60336 1514 aa37.83■■■■□ 3.65
SDCCAG3-201ENST00000298537 GPATCH8Q9UKJ3 1502 aaKnown RBP37.83■■■■□ 3.65
SDCCAG3-201ENST00000298537 NAIPQ13075 1403 aa37.82■■■■□ 3.64
SDCCAG3-201ENST00000298537 CFDP1Q9UEE9 299 aaPredicted RBP37.78■■■■□ 3.64
SDCCAG3-201ENST00000298537 ZNF777Q9ULD5 760 aaPredicted RBP37.76■■■■□ 3.63
SDCCAG3-201ENST00000298537 ABCC10Q5T3U5 1492 aa37.74■■■■□ 3.63
SDCCAG3-201ENST00000298537 ABCC2Q92887 1545 aa37.73■■■■□ 3.63
SDCCAG3-201ENST00000298537 DAPK1P53355 1430 aa37.71■■■■□ 3.63
SDCCAG3-201ENST00000298537 ABCC5O15440 1437 aa37.7■■■■□ 3.63
SDCCAG3-201ENST00000298537 CAMSAP2Q08AD1 1489 aa37.69■■■■□ 3.62
SDCCAG3-201ENST00000298537 ITSN2Q9NZM3 1697 aa37.66■■■■□ 3.62
SDCCAG3-201ENST00000298537 CDC42BPAQ5VT25 1732 aa37.65■■■■□ 3.62
SDCCAG3-201ENST00000298537 KDM6BO15054 1643 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms