RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 IGF1RP08069 1367 aa40.77■■■■■ 4.12
PHOX2A-201ENST00000298231 PPARGC1BQ86YN6 1023 aaKnown RBP40.75■■■■■ 4.11
PHOX2A-201ENST00000298231 ADAMTS12P58397 1594 aa40.73■■■■■ 4.11
PHOX2A-201ENST00000298231 FBLN2P98095 1184 aa40.71■■■■■ 4.11
PHOX2A-201ENST00000298231 CHMP7Q8WUX9 453 aaPredicted RBP40.68■■■■■ 4.1
PHOX2A-201ENST00000298231 ARAP1Q96P48 1450 aa40.65■■■■■ 4.1
PHOX2A-201ENST00000298231 FHAD1B1AJZ9 1412 aa40.65■■■■■ 4.1
PHOX2A-201ENST00000298231 CARMIL1Q5VZK9 1371 aa40.61■■■■■ 4.09
PHOX2A-201ENST00000298231 CUL7Q14999 1698 aa40.59■■■■■ 4.09
PHOX2A-201ENST00000298231 GRIN2AQ12879 1464 aa40.56■■■■■ 4.08
PHOX2A-201ENST00000298231 APLP2Q06481 763 aa40.47■■■■■ 4.07
PHOX2A-201ENST00000298231 ARHGAP35Q9NRY4 1499 aa40.46■■■■■ 4.07
PHOX2A-201ENST00000298231 CLASP1Q7Z460 1538 aa40.44■■■■■ 4.06
PHOX2A-201ENST00000298231 NUP160Q12769 1436 aa40.39■■■■■ 4.06
PHOX2A-201ENST00000298231 CEP170Q5SW79 1584 aa40.34■■■■■ 4.05
PHOX2A-201ENST00000298231 RANGAP1P46060 587 aaPredicted RBP40.27■■■■■ 4.04
PHOX2A-201ENST00000298231 TTBK1Q5TCY1 1321 aaPredicted RBP40.26■■■■■ 4.04
PHOX2A-201ENST00000298231 CTTNBP2Q8WZ74 1663 aa40.25■■■■■ 4.03
PHOX2A-201ENST00000298231 EFCAB5A4FU69 1503 aa40.22■■■■■ 4.03
PHOX2A-201ENST00000298231 ARHGEF11O15085 1522 aa40.21■■■■■ 4.03
PHOX2A-201ENST00000298231 MAP3K1Q13233 1512 aa40.21■■■■■ 4.03
PHOX2A-201ENST00000298231 RIMBP3CA6NJZ7 1639 aa40.19■■■■■ 4.02
PHOX2A-201ENST00000298231 RIMBP3BA6NNM3 1639 aa40.19■■■■■ 4.02
PHOX2A-201ENST00000298231 RIMBP3Q9UFD9 1639 aa40.19■■■■■ 4.02
PHOX2A-201ENST00000298231 SHROOM2Q13796 1616 aa40.06■■■■■ 4
PHOX2A-201ENST00000298231 CCER1Q8TC90 406 aaPredicted RBP40.04■■■■■ 4
PHOX2A-201ENST00000298231 KIAA0586Q9BVV6 1533 aa40.04■■■■■ 4
PHOX2A-201ENST00000298231 TIAM1Q13009 1591 aa40■■■■□ 3.99
PHOX2A-201ENST00000298231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.99■■■■□ 3.99
PHOX2A-201ENST00000298231 CFAP43Q8NDM7 1665 aa39.95■■■■□ 3.99
PHOX2A-201ENST00000298231 RRBP1Q9P2E9 1410 aaKnown RBP39.92■■■■□ 3.98
PHOX2A-201ENST00000298231 JPH4Q96JJ6 628 aa39.91■■■■□ 3.98
PHOX2A-201ENST00000298231 PCF11O94913 1555 aaKnown RBP39.89■■■■□ 3.98
PHOX2A-201ENST00000298231 FYCO1Q9BQS8 1478 aa39.88■■■■□ 3.97
PHOX2A-201ENST00000298231 SAMD9Q5K651 1589 aa39.87■■■■□ 3.97
PHOX2A-201ENST00000298231 ERCC6L2Q5T890 1561 aa39.86■■■■□ 3.97
PHOX2A-201ENST00000298231 IQGAP2Q13576 1575 aa39.84■■■■□ 3.97
PHOX2A-201ENST00000298231 KANK4Q5T7N3 995 aaPredicted RBP39.84■■■■□ 3.97
PHOX2A-201ENST00000298231 PRG4Q92954 1404 aaPredicted RBP39.83■■■■□ 3.97
PHOX2A-201ENST00000298231 CASKIN1Q8WXD9 1431 aa39.79■■■■□ 3.96
PHOX2A-201ENST00000298231 FMN1Q68DA7 1419 aa39.78■■■■□ 3.96
PHOX2A-201ENST00000298231 LRRC9Q6ZRR7 1453 aa39.76■■■■□ 3.95
PHOX2A-201ENST00000298231 FHOD3Q2V2M9 1422 aa39.75■■■■□ 3.95
PHOX2A-201ENST00000298231 CYB5RLQ6IPT4 315 aa39.75■■■■□ 3.95
PHOX2A-201ENST00000298231 HNRNPUL2Q1KMD3 747 aaKnown RBP39.68■■■■□ 3.94
PHOX2A-201ENST00000298231 UGGT2Q9NYU1 1516 aa39.65■■■■□ 3.94
PHOX2A-201ENST00000298231 CCNB3Q8WWL7 1395 aa39.65■■■■□ 3.94
PHOX2A-201ENST00000298231 CARMIL2Q6F5E8 1435 aa39.58■■■■□ 3.93
PHOX2A-201ENST00000298231 DISP1Q96F81 1524 aa39.55■■■■□ 3.92
PHOX2A-201ENST00000298231 P3H3Q8IVL6 736 aa39.48■■■■□ 3.91
PHOX2A-201ENST00000298231 KIAA0556O60303 1618 aa39.46■■■■□ 3.91
PHOX2A-201ENST00000298231 CLSPNQ9HAW4 1339 aa39.44■■■■□ 3.9
PHOX2A-201ENST00000298231 PTPRGP23470 1445 aa39.38■■■■□ 3.89
PHOX2A-201ENST00000298231 PHLDB1Q86UU1 1377 aa39.36■■■■□ 3.89
PHOX2A-201ENST00000298231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.35■■■■□ 3.89
PHOX2A-201ENST00000298231 CCDC18Q5T9S5 1454 aa39.34■■■■□ 3.89
PHOX2A-201ENST00000298231 HECW1Q76N89 1606 aa39.32■■■■□ 3.88
PHOX2A-201ENST00000298231 LRRIQ1Q96JM4 1722 aa39.32■■■■□ 3.88
PHOX2A-201ENST00000298231 EHBP1L1Q8N3D4 1523 aa39.29■■■■□ 3.88
PHOX2A-201ENST00000298231 DHX57Q6P158 1386 aaKnown RBP39.24■■■■□ 3.87
PHOX2A-201ENST00000298231 ADCY10Q96PN6 1610 aa39.23■■■■□ 3.87
PHOX2A-201ENST00000298231 ATP1B4Q9UN42 357 aaPredicted RBP39.21■■■■□ 3.87
PHOX2A-201ENST00000298231 SUPT6HQ7KZ85 1726 aaKnown RBP39.19■■■■□ 3.86
PHOX2A-201ENST00000298231 MTUS2Q5JR59 1369 aa39.18■■■■□ 3.86
PHOX2A-201ENST00000298231 UHRF1BP1LA0JNW5 1464 aa39.14■■■■□ 3.86
PHOX2A-201ENST00000298231 UACAQ9BZF9 1416 aa39.13■■■■□ 3.86
PHOX2A-201ENST00000298231 FGD6Q6ZV73 1430 aa39.11■■■■□ 3.85
PHOX2A-201ENST00000298231 ABCC2Q92887 1545 aa39.09■■■■□ 3.85
PHOX2A-201ENST00000298231 NCOA2Q15596 1464 aa39.06■■■■□ 3.84
PHOX2A-201ENST00000298231 SETD5Q9C0A6 1442 aa39.04■■■■□ 3.84
PHOX2A-201ENST00000298231 EPRSP07814 1512 aaKnown RBP39.04■■■■□ 3.84
PHOX2A-201ENST00000298231 ABCA8O94911 1581 aa39.03■■■■□ 3.84
PHOX2A-201ENST00000298231 PLB1Q6P1J6 1458 aa39.02■■■■□ 3.84
PHOX2A-201ENST00000298231 MYOM3Q5VTT5 1437 aa39.01■■■■□ 3.84
PHOX2A-201ENST00000298231 NPM1P06748 294 aaKnown RBP eCLIP39.01■■■■□ 3.84
PHOX2A-201ENST00000298231 RAB3GAP2Q9H2M9 1393 aa39■■■■□ 3.83
PHOX2A-201ENST00000298231 MAPKBP1O60336 1514 aa38.97■■■■□ 3.83
PHOX2A-201ENST00000298231 FAM50AQ14320 339 aaKnown RBP38.95■■■■□ 3.83
PHOX2A-201ENST00000298231 MAGI3Q5TCQ9 1506 aa38.94■■■■□ 3.82
PHOX2A-201ENST00000298231 KDM5BQ9UGL1 1544 aa38.94■■■■□ 3.82
PHOX2A-201ENST00000298231 ITGAEP38570 1179 aa38.9■■■■□ 3.82
PHOX2A-201ENST00000298231 RAPGEF6Q8TEU7 1601 aa38.9■■■■□ 3.82
PHOX2A-201ENST00000298231 ZNF316A6NFI3 1004 aaPredicted RBP38.84■■■■□ 3.81
PHOX2A-201ENST00000298231 TRHP20396 242 aaPredicted RBP38.84■■■■□ 3.81
PHOX2A-201ENST00000298231 TCOF1Q13428 1488 aaKnown RBP38.84■■■■□ 3.81
PHOX2A-201ENST00000298231 PTPN23Q9H3S7 1636 aa38.84■■■■□ 3.81
PHOX2A-201ENST00000298231 ZCCHC11Q5TAX3 1644 aaKnown RBP38.83■■■■□ 3.81
PHOX2A-201ENST00000298231 CDK13Q14004 1512 aaKnown RBP38.81■■■■□ 3.8
PHOX2A-201ENST00000298231 MIA2Q96PC5 1412 aa38.77■■■■□ 3.8
PHOX2A-201ENST00000298231 NUP153P49790 1475 aaKnown RBP38.77■■■■□ 3.8
PHOX2A-201ENST00000298231 ASXL2Q76L83 1435 aa38.75■■■■□ 3.79
PHOX2A-201ENST00000298231 HFM1A2PYH4 1435 aa38.74■■■■□ 3.79
PHOX2A-201ENST00000298231 ABCC10Q5T3U5 1492 aa38.74■■■■□ 3.79
PHOX2A-201ENST00000298231 DIEXFQ68CQ4 756 aaKnown RBP38.7■■■■□ 3.79
PHOX2A-201ENST00000298231 KIF13AQ9H1H9 1805 aa38.69■■■■□ 3.78
PHOX2A-201ENST00000298231 DIP2BQ9P265 1576 aa38.69■■■■□ 3.78
PHOX2A-201ENST00000298231 ATP10BO94823 1461 aa38.68■■■■□ 3.78
PHOX2A-201ENST00000298231 AKNAQ7Z591 1439 aa38.66■■■■□ 3.78
PHOX2A-201ENST00000298231 WDR7Q9Y4E6 1490 aa38.6■■■■□ 3.77
PHOX2A-201ENST00000298231 PTPRKQ15262 1439 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms