RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 CLIP1P30622 1438 aa22.67■■□□□ 1.22
CMBL-201ENST00000296658 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
CMBL-201ENST00000296658 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
CMBL-201ENST00000296658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
CMBL-201ENST00000296658 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
CMBL-201ENST00000296658 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
CMBL-201ENST00000296658 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
CMBL-201ENST00000296658 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
CMBL-201ENST00000296658 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
CMBL-201ENST00000296658 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
CMBL-201ENST00000296658 KIAA0586Q9BVV6 1533 aa22.48■■□□□ 1.19
CMBL-201ENST00000296658 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
CMBL-201ENST00000296658 EFCAB5A4FU69 1503 aa22.47■■□□□ 1.19
CMBL-201ENST00000296658 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
CMBL-201ENST00000296658 FBLN2P98095 1184 aa22.46■■□□□ 1.19
CMBL-201ENST00000296658 NUP160Q12769 1436 aa22.46■■□□□ 1.19
CMBL-201ENST00000296658 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.18
CMBL-201ENST00000296658 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
CMBL-201ENST00000296658 CHD1O14646 1710 aa22.4■■□□□ 1.18
CMBL-201ENST00000296658 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
CMBL-201ENST00000296658 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
CMBL-201ENST00000296658 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
CMBL-201ENST00000296658 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
CMBL-201ENST00000296658 FHOD3Q2V2M9 1422 aa22.31■■□□□ 1.16
CMBL-201ENST00000296658 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
CMBL-201ENST00000296658 FMN1Q68DA7 1419 aa22.26■■□□□ 1.15
CMBL-201ENST00000296658 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
CMBL-201ENST00000296658 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
CMBL-201ENST00000296658 APLP2Q06481 763 aa22.21■■□□□ 1.15
CMBL-201ENST00000296658 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
CMBL-201ENST00000296658 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
CMBL-201ENST00000296658 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
CMBL-201ENST00000296658 SHROOM2Q13796 1616 aa22.18■■□□□ 1.14
CMBL-201ENST00000296658 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
CMBL-201ENST00000296658 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
CMBL-201ENST00000296658 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
CMBL-201ENST00000296658 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CMBL-201ENST00000296658 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
CMBL-201ENST00000296658 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.13
CMBL-201ENST00000296658 TIAM1Q13009 1591 aa22.08■■□□□ 1.12
CMBL-201ENST00000296658 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
CMBL-201ENST00000296658 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
CMBL-201ENST00000296658 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
CMBL-201ENST00000296658 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
CMBL-201ENST00000296658 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
CMBL-201ENST00000296658 HECW1Q76N89 1606 aa22.03■■□□□ 1.12
CMBL-201ENST00000296658 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
CMBL-201ENST00000296658 RAPGEF6Q8TEU7 1601 aa22■■□□□ 1.11
CMBL-201ENST00000296658 CCDC18Q5T9S5 1454 aa22■■□□□ 1.11
CMBL-201ENST00000296658 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
CMBL-201ENST00000296658 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
CMBL-201ENST00000296658 PTPRGP23470 1445 aa21.98■■□□□ 1.11
CMBL-201ENST00000296658 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
CMBL-201ENST00000296658 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
CMBL-201ENST00000296658 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
CMBL-201ENST00000296658 ABCA8O94911 1581 aa21.95■■□□□ 1.1
CMBL-201ENST00000296658 EPRSP07814 1512 aaKnown RBP21.95■■□□□ 1.1
CMBL-201ENST00000296658 PLB1Q6P1J6 1458 aa21.94■■□□□ 1.1
CMBL-201ENST00000296658 NUP153P49790 1475 aaKnown RBP21.93■■□□□ 1.1
CMBL-201ENST00000296658 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
CMBL-201ENST00000296658 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
CMBL-201ENST00000296658 UACAQ9BZF9 1416 aa21.86■■□□□ 1.09
CMBL-201ENST00000296658 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
CMBL-201ENST00000296658 EHBP1L1Q8N3D4 1523 aa21.84■■□□□ 1.09
CMBL-201ENST00000296658 GTF3C3Q9Y5Q9 886 aa21.83■■□□□ 1.08
CMBL-201ENST00000296658 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
CMBL-201ENST00000296658 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
CMBL-201ENST00000296658 ABCC2Q92887 1545 aa21.79■■□□□ 1.08
CMBL-201ENST00000296658 UHRF1BP1LA0JNW5 1464 aa21.79■■□□□ 1.08
CMBL-201ENST00000296658 ATP10BO94823 1461 aa21.79■■□□□ 1.08
CMBL-201ENST00000296658 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
CMBL-201ENST00000296658 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
CMBL-201ENST00000296658 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
CMBL-201ENST00000296658 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
CMBL-201ENST00000296658 ARHGEF11O15085 1522 aa21.74■■□□□ 1.07
CMBL-201ENST00000296658 NCOA2Q15596 1464 aa21.73■■□□□ 1.07
CMBL-201ENST00000296658 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
CMBL-201ENST00000296658 MIER1Q8N108 512 aa21.71■■□□□ 1.07
CMBL-201ENST00000296658 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
CMBL-201ENST00000296658 PLEKHD1A6NEE1 506 aa21.69■■□□□ 1.06
CMBL-201ENST00000296658 KDM5BQ9UGL1 1544 aa21.68■■□□□ 1.06
CMBL-201ENST00000296658 ADCY10Q96PN6 1610 aa21.66■■□□□ 1.06
CMBL-201ENST00000296658 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
CMBL-201ENST00000296658 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
CMBL-201ENST00000296658 ZCCHC11Q5TAX3 1644 aaKnown RBP21.63■■□□□ 1.05
CMBL-201ENST00000296658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.63■■□□□ 1.05
CMBL-201ENST00000296658 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
CMBL-201ENST00000296658 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
CMBL-201ENST00000296658 CLSPNQ9HAW4 1339 aa21.6■■□□□ 1.05
CMBL-201ENST00000296658 ITGAEP38570 1179 aa21.59■■□□□ 1.05
CMBL-201ENST00000296658 KIF14Q15058 1648 aa21.58■■□□□ 1.05
CMBL-201ENST00000296658 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
CMBL-201ENST00000296658 RIMBP3CA6NJZ7 1639 aa21.57■■□□□ 1.04
CMBL-201ENST00000296658 RIMBP3BA6NNM3 1639 aa21.57■■□□□ 1.04
CMBL-201ENST00000296658 RIMBP3Q9UFD9 1639 aa21.57■■□□□ 1.04
CMBL-201ENST00000296658 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
CMBL-201ENST00000296658 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
CMBL-201ENST00000296658 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
CMBL-201ENST00000296658 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
CMBL-201ENST00000296658 ITSN2Q9NZM3 1697 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms