RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
CFDP1-201ENST00000283882 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
CFDP1-201ENST00000283882 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
CFDP1-201ENST00000283882 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
CFDP1-201ENST00000283882 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
CFDP1-201ENST00000283882 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
CFDP1-201ENST00000283882 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
CFDP1-201ENST00000283882 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
CFDP1-201ENST00000283882 CLIP1P30622 1438 aa19.99■□□□□ 0.79
CFDP1-201ENST00000283882 EFCAB5A4FU69 1503 aa19.93■□□□□ 0.78
CFDP1-201ENST00000283882 NUP160Q12769 1436 aa19.93■□□□□ 0.78
CFDP1-201ENST00000283882 KIAA0586Q9BVV6 1533 aa19.91■□□□□ 0.78
CFDP1-201ENST00000283882 IQGAP2Q13576 1575 aa19.91■□□□□ 0.78
CFDP1-201ENST00000283882 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
CFDP1-201ENST00000283882 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
CFDP1-201ENST00000283882 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
CFDP1-201ENST00000283882 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
CFDP1-201ENST00000283882 CHD1O14646 1710 aa19.85■□□□□ 0.77
CFDP1-201ENST00000283882 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
CFDP1-201ENST00000283882 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
CFDP1-201ENST00000283882 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
CFDP1-201ENST00000283882 FBLN2P98095 1184 aa19.77■□□□□ 0.76
CFDP1-201ENST00000283882 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
CFDP1-201ENST00000283882 KIAA0556O60303 1618 aa19.71■□□□□ 0.75
CFDP1-201ENST00000283882 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
CFDP1-201ENST00000283882 DISP1Q96F81 1524 aa19.7■□□□□ 0.74
CFDP1-201ENST00000283882 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
CFDP1-201ENST00000283882 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
CFDP1-201ENST00000283882 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
CFDP1-201ENST00000283882 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
CFDP1-201ENST00000283882 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
CFDP1-201ENST00000283882 JPH4Q96JJ6 628 aa19.63■□□□□ 0.73
CFDP1-201ENST00000283882 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
CFDP1-201ENST00000283882 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
CFDP1-201ENST00000283882 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
CFDP1-201ENST00000283882 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
CFDP1-201ENST00000283882 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
CFDP1-201ENST00000283882 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
CFDP1-201ENST00000283882 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
CFDP1-201ENST00000283882 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
CFDP1-201ENST00000283882 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
CFDP1-201ENST00000283882 APLP2Q06481 763 aa19.5■□□□□ 0.71
CFDP1-201ENST00000283882 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CFDP1-201ENST00000283882 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
CFDP1-201ENST00000283882 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
CFDP1-201ENST00000283882 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
CFDP1-201ENST00000283882 ABCA8O94911 1581 aa19.45■□□□□ 0.7
CFDP1-201ENST00000283882 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
CFDP1-201ENST00000283882 PTPRGP23470 1445 aa19.42■□□□□ 0.7
CFDP1-201ENST00000283882 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
CFDP1-201ENST00000283882 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
CFDP1-201ENST00000283882 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
CFDP1-201ENST00000283882 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
CFDP1-201ENST00000283882 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
CFDP1-201ENST00000283882 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
CFDP1-201ENST00000283882 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
CFDP1-201ENST00000283882 ABCC2Q92887 1545 aa19.34■□□□□ 0.69
CFDP1-201ENST00000283882 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
CFDP1-201ENST00000283882 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
CFDP1-201ENST00000283882 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
CFDP1-201ENST00000283882 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
CFDP1-201ENST00000283882 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
CFDP1-201ENST00000283882 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
CFDP1-201ENST00000283882 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
CFDP1-201ENST00000283882 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
CFDP1-201ENST00000283882 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
CFDP1-201ENST00000283882 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
CFDP1-201ENST00000283882 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
CFDP1-201ENST00000283882 ATP10BO94823 1461 aa19.24■□□□□ 0.67
CFDP1-201ENST00000283882 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
CFDP1-201ENST00000283882 CDK11AQ9UQ88 783 aaPredicted RBP19.23■□□□□ 0.67
CFDP1-201ENST00000283882 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
CFDP1-201ENST00000283882 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
CFDP1-201ENST00000283882 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
CFDP1-201ENST00000283882 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
CFDP1-201ENST00000283882 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
CFDP1-201ENST00000283882 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
CFDP1-201ENST00000283882 RIMBP3CA6NJZ7 1639 aa19.15■□□□□ 0.66
CFDP1-201ENST00000283882 RIMBP3BA6NNM3 1639 aa19.15■□□□□ 0.66
CFDP1-201ENST00000283882 RIMBP3Q9UFD9 1639 aa19.15■□□□□ 0.66
CFDP1-201ENST00000283882 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
CFDP1-201ENST00000283882 KIF14Q15058 1648 aa19.13■□□□□ 0.65
CFDP1-201ENST00000283882 MYOM3Q5VTT5 1437 aa19.12■□□□□ 0.65
CFDP1-201ENST00000283882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
CFDP1-201ENST00000283882 PCGF6Q9BYE7 350 aa19.12■□□□□ 0.65
CFDP1-201ENST00000283882 CCNB3Q8WWL7 1395 aa19.11■□□□□ 0.65
CFDP1-201ENST00000283882 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
CFDP1-201ENST00000283882 ARID3CA6NKF2 412 aa19.1■□□□□ 0.65
CFDP1-201ENST00000283882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
CFDP1-201ENST00000283882 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
CFDP1-201ENST00000283882 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
CFDP1-201ENST00000283882 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
CFDP1-201ENST00000283882 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
CFDP1-201ENST00000283882 ITSN2Q9NZM3 1697 aa19.07■□□□□ 0.64
CFDP1-201ENST00000283882 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
CFDP1-201ENST00000283882 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
CFDP1-201ENST00000283882 PTPN23Q9H3S7 1636 aa19.01■□□□□ 0.63
CFDP1-201ENST00000283882 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
CFDP1-201ENST00000283882 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
CFDP1-201ENST00000283882 CACNB1Q02641 598 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms