RNA–Protein interactions for RNA: ENST00000277632.7

MINDY3-201, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MINDY3, Length 2,381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-201ENST00000277632 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.15
MINDY3-201ENST00000277632 AQRO60306 1485 aaKnown RBP eCLIP14.08□□□□□ -0.15
MINDY3-201ENST00000277632 CLIP1P30622 1438 aa14.05□□□□□ -0.16
MINDY3-201ENST00000277632 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
MINDY3-201ENST00000277632 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
MINDY3-201ENST00000277632 CUL7Q14999 1698 aa14.03□□□□□ -0.16
MINDY3-201ENST00000277632 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
MINDY3-201ENST00000277632 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
MINDY3-201ENST00000277632 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
MINDY3-201ENST00000277632 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
MINDY3-201ENST00000277632 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
MINDY3-201ENST00000277632 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
MINDY3-201ENST00000277632 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
MINDY3-201ENST00000277632 CTTNBP2Q8WZ74 1663 aa13.93□□□□□ -0.18
MINDY3-201ENST00000277632 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
MINDY3-201ENST00000277632 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
MINDY3-201ENST00000277632 YTHDC1Q96MU7 727 aaKnown RBP13.91□□□□□ -0.18
MINDY3-201ENST00000277632 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
MINDY3-201ENST00000277632 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
MINDY3-201ENST00000277632 FHOD3Q2V2M9 1422 aa13.83□□□□□ -0.2
MINDY3-201ENST00000277632 MIER1Q8N108 512 aa13.82□□□□□ -0.2
MINDY3-201ENST00000277632 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
MINDY3-201ENST00000277632 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
MINDY3-201ENST00000277632 CLSPNQ9HAW4 1339 aa13.81□□□□□ -0.2
MINDY3-201ENST00000277632 FBLN2P98095 1184 aa13.8□□□□□ -0.2
MINDY3-201ENST00000277632 SYNJ2O15056 1496 aa13.78□□□□□ -0.2
MINDY3-201ENST00000277632 IQGAP2Q13576 1575 aa13.77□□□□□ -0.2
MINDY3-201ENST00000277632 SAMD9Q5K651 1589 aa13.77□□□□□ -0.2
MINDY3-201ENST00000277632 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
MINDY3-201ENST00000277632 CEP170Q5SW79 1584 aa13.77□□□□□ -0.21
MINDY3-201ENST00000277632 EFCAB5A4FU69 1503 aa13.77□□□□□ -0.21
MINDY3-201ENST00000277632 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
MINDY3-201ENST00000277632 KANK4Q5T7N3 995 aaPredicted RBP13.75□□□□□ -0.21
MINDY3-201ENST00000277632 APLP2Q06481 763 aa13.73□□□□□ -0.21
MINDY3-201ENST00000277632 CHD1O14646 1710 aa13.72□□□□□ -0.21
MINDY3-201ENST00000277632 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
MINDY3-201ENST00000277632 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
MINDY3-201ENST00000277632 NUP160Q12769 1436 aa13.69□□□□□ -0.22
MINDY3-201ENST00000277632 ANP32EQ9BTT0 268 aa13.69□□□□□ -0.22
MINDY3-201ENST00000277632 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
MINDY3-201ENST00000277632 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
MINDY3-201ENST00000277632 DISP1Q96F81 1524 aa13.67□□□□□ -0.22
MINDY3-201ENST00000277632 SUPT16HQ9Y5B9 1047 aaKnown RBP13.67□□□□□ -0.22
MINDY3-201ENST00000277632 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
MINDY3-201ENST00000277632 KIAA0556O60303 1618 aa13.65□□□□□ -0.22
MINDY3-201ENST00000277632 CASKIN1Q8WXD9 1431 aa13.65□□□□□ -0.22
MINDY3-201ENST00000277632 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
MINDY3-201ENST00000277632 FMN1Q68DA7 1419 aa13.64□□□□□ -0.23
MINDY3-201ENST00000277632 CFAP43Q8NDM7 1665 aa13.64□□□□□ -0.23
MINDY3-201ENST00000277632 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
MINDY3-201ENST00000277632 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
MINDY3-201ENST00000277632 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
MINDY3-201ENST00000277632 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
MINDY3-201ENST00000277632 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
MINDY3-201ENST00000277632 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
MINDY3-201ENST00000277632 CDK13Q14004 1512 aaKnown RBP13.55□□□□□ -0.24
MINDY3-201ENST00000277632 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
MINDY3-201ENST00000277632 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
MINDY3-201ENST00000277632 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
MINDY3-201ENST00000277632 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
MINDY3-201ENST00000277632 PRG4Q92954 1404 aaPredicted RBP13.53□□□□□ -0.24
MINDY3-201ENST00000277632 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
MINDY3-201ENST00000277632 PLB1Q6P1J6 1458 aa13.53□□□□□ -0.24
MINDY3-201ENST00000277632 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
MINDY3-201ENST00000277632 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
MINDY3-201ENST00000277632 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
MINDY3-201ENST00000277632 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
MINDY3-201ENST00000277632 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
MINDY3-201ENST00000277632 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
MINDY3-201ENST00000277632 RRBP1Q9P2E9 1410 aaKnown RBP13.49□□□□□ -0.25
MINDY3-201ENST00000277632 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
MINDY3-201ENST00000277632 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
MINDY3-201ENST00000277632 CCNB3Q8WWL7 1395 aa13.46□□□□□ -0.25
MINDY3-201ENST00000277632 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
MINDY3-201ENST00000277632 ABCA8O94911 1581 aa13.44□□□□□ -0.26
MINDY3-201ENST00000277632 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
MINDY3-201ENST00000277632 ITGAEP38570 1179 aa13.44□□□□□ -0.26
MINDY3-201ENST00000277632 SUPT6HQ7KZ85 1726 aaKnown RBP13.43□□□□□ -0.26
MINDY3-201ENST00000277632 PTPRGP23470 1445 aa13.42□□□□□ -0.26
MINDY3-201ENST00000277632 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
MINDY3-201ENST00000277632 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
MINDY3-201ENST00000277632 ATP10BO94823 1461 aa13.38□□□□□ -0.27
MINDY3-201ENST00000277632 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
MINDY3-201ENST00000277632 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
MINDY3-201ENST00000277632 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
MINDY3-201ENST00000277632 KIF14Q15058 1648 aa13.36□□□□□ -0.27
MINDY3-201ENST00000277632 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
MINDY3-201ENST00000277632 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
MINDY3-201ENST00000277632 TROQ12816 1431 aaPredicted RBP13.33□□□□□ -0.28
MINDY3-201ENST00000277632 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
MINDY3-201ENST00000277632 PTPRKQ15262 1439 aa13.31□□□□□ -0.28
MINDY3-201ENST00000277632 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
MINDY3-201ENST00000277632 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
MINDY3-201ENST00000277632 ADCY10Q96PN6 1610 aa13.29□□□□□ -0.28
MINDY3-201ENST00000277632 BCANQ96GW7 911 aa13.29□□□□□ -0.28
MINDY3-201ENST00000277632 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
MINDY3-201ENST00000277632 FKBP8Q14318 412 aa13.28□□□□□ -0.28
MINDY3-201ENST00000277632 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
MINDY3-201ENST00000277632 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
MINDY3-201ENST00000277632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms