RNA–Protein interactions for RNA: ENST00000277632.7

MINDY3-201, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MINDY3, Length 2,381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-201ENST00000277632 NISCHQ9Y2I1 1504 aa20.09■□□□□ 0.81
MINDY3-201ENST00000277632 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.38
MINDY3-201ENST00000277632 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
MINDY3-201ENST00000277632 DCAF8L2P0C7V8 631 aa16.71■□□□□ 0.27
MINDY3-201ENST00000277632 ABCC9O60706 1549 aa16.65■□□□□ 0.26
MINDY3-201ENST00000277632 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
MINDY3-201ENST00000277632 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
MINDY3-201ENST00000277632 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
MINDY3-201ENST00000277632 NACADO15069 1562 aa16.24■□□□□ 0.19
MINDY3-201ENST00000277632 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
MINDY3-201ENST00000277632 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
MINDY3-201ENST00000277632 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
MINDY3-201ENST00000277632 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
MINDY3-201ENST00000277632 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
MINDY3-201ENST00000277632 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
MINDY3-201ENST00000277632 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
MINDY3-201ENST00000277632 HRCP23327 699 aa15.7■□□□□ 0.1
MINDY3-201ENST00000277632 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
MINDY3-201ENST00000277632 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
MINDY3-201ENST00000277632 WIZO95785 1651 aa15.49■□□□□ 0.07
MINDY3-201ENST00000277632 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
MINDY3-201ENST00000277632 SMARCA4P51532 1647 aa15.46■□□□□ 0.07
MINDY3-201ENST00000277632 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
MINDY3-201ENST00000277632 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
MINDY3-201ENST00000277632 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
MINDY3-201ENST00000277632 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
MINDY3-201ENST00000277632 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
MINDY3-201ENST00000277632 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
MINDY3-201ENST00000277632 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
MINDY3-201ENST00000277632 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
MINDY3-201ENST00000277632 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
MINDY3-201ENST00000277632 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
MINDY3-201ENST00000277632 BAZ1BQ9UIG0 1483 aaKnown RBP15.1■□□□□ 0.01
MINDY3-201ENST00000277632 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
MINDY3-201ENST00000277632 NCAPD3P42695 1498 aa15.02□□□□□ -0.01
MINDY3-201ENST00000277632 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
MINDY3-201ENST00000277632 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
MINDY3-201ENST00000277632 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
MINDY3-201ENST00000277632 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
MINDY3-201ENST00000277632 ZEB1P37275 1124 aaPredicted RBP14.85□□□□□ -0.03
MINDY3-201ENST00000277632 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
MINDY3-201ENST00000277632 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
MINDY3-201ENST00000277632 MYT1Q01538 1121 aa14.75□□□□□ -0.05
MINDY3-201ENST00000277632 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
MINDY3-201ENST00000277632 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.05
MINDY3-201ENST00000277632 CFTRP13569 1480 aa14.71□□□□□ -0.05
MINDY3-201ENST00000277632 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
MINDY3-201ENST00000277632 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
MINDY3-201ENST00000277632 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
MINDY3-201ENST00000277632 NESP48681 1621 aa14.65□□□□□ -0.06
MINDY3-201ENST00000277632 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
MINDY3-201ENST00000277632 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
MINDY3-201ENST00000277632 SOGA1O94964 1423 aa14.58□□□□□ -0.07
MINDY3-201ENST00000277632 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
MINDY3-201ENST00000277632 CUX1P39880 1505 aa14.57□□□□□ -0.08
MINDY3-201ENST00000277632 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
MINDY3-201ENST00000277632 BIVM-ERCC5R4GMW8 1640 aa14.54□□□□□ -0.08
MINDY3-201ENST00000277632 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
MINDY3-201ENST00000277632 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
MINDY3-201ENST00000277632 ACIN1Q9UKV3 1341 aaKnown RBP14.5□□□□□ -0.09
MINDY3-201ENST00000277632 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
MINDY3-201ENST00000277632 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
MINDY3-201ENST00000277632 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
MINDY3-201ENST00000277632 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
MINDY3-201ENST00000277632 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
MINDY3-201ENST00000277632 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
MINDY3-201ENST00000277632 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
MINDY3-201ENST00000277632 TOPBP1Q92547 1522 aa14.38□□□□□ -0.11
MINDY3-201ENST00000277632 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
MINDY3-201ENST00000277632 EEA1Q15075 1411 aa14.37□□□□□ -0.11
MINDY3-201ENST00000277632 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
MINDY3-201ENST00000277632 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.11
MINDY3-201ENST00000277632 RAD54L2Q9Y4B4 1467 aa14.33□□□□□ -0.12
MINDY3-201ENST00000277632 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
MINDY3-201ENST00000277632 CUX2O14529 1486 aa14.3□□□□□ -0.12
MINDY3-201ENST00000277632 KIF27Q86VH2 1401 aa14.27□□□□□ -0.12
MINDY3-201ENST00000277632 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
MINDY3-201ENST00000277632 KIF21BO75037 1637 aa14.26□□□□□ -0.13
MINDY3-201ENST00000277632 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
MINDY3-201ENST00000277632 UBTFP17480 764 aaKnown RBP14.24□□□□□ -0.13
MINDY3-201ENST00000277632 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
MINDY3-201ENST00000277632 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
MINDY3-201ENST00000277632 WDR97A6NE52 1622 aa14.21□□□□□ -0.13
MINDY3-201ENST00000277632 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
MINDY3-201ENST00000277632 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
MINDY3-201ENST00000277632 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
MINDY3-201ENST00000277632 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
MINDY3-201ENST00000277632 IGF1RP08069 1367 aa14.2□□□□□ -0.14
MINDY3-201ENST00000277632 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
MINDY3-201ENST00000277632 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
MINDY3-201ENST00000277632 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
MINDY3-201ENST00000277632 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
MINDY3-201ENST00000277632 THOC2Q8NI27 1593 aaKnown RBP14.16□□□□□ -0.14
MINDY3-201ENST00000277632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
MINDY3-201ENST00000277632 WDR62O43379 1518 aa14.16□□□□□ -0.14
MINDY3-201ENST00000277632 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
MINDY3-201ENST00000277632 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
MINDY3-201ENST00000277632 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
MINDY3-201ENST00000277632 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
MINDY3-201ENST00000277632 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms